RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 CBFA2T2O43439 604 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 CSO75390 466 aaKnown RBP8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 ZMPSTE24O75844 475 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 NEBLO76041 1014 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 FTLP02792 175 aaPredicted RBP8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 SERPING1P05155 500 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 GP1BAP07359 652 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 RHOCP08134 193 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 FAM228BP0C875 321 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 AKT2P31751 481 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 ADRA1BP35368 520 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 CDH4P55283 916 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 GABREP78334 506 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 SKOR1P84550 965 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 TBX2Q13207 712 aaPredicted RBP8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 ZNF177Q13360 481 aaPredicted RBP8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 FZD2Q14332 565 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 ASTE1Q2TB18 679 aaPredicted RBP8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 ZNF542PQ5EBM4 170 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 SPECC1LQ69YQ0 1117 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 PPP1R2P3Q6NXS1 205 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 SARM1Q6SZW1 724 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 LINGO4Q6UY18 593 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 KYAT3Q6YP21 454 aaKnown RBP8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 DPY19L3Q6ZPD9 716 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 CYP4V2Q6ZWL3 525 aaPredicted RBP8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 ERN2Q76MJ5 926 aaKnown RBP8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 PTAR1Q7Z6K3 402 aaPredicted RBP8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 NLRP14Q86W24 1093 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 GAS2L3Q86XJ1 694 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 ARFGAP1Q8N6T3 406 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 DCAF4L2Q8NA75 395 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 ATP11CQ8NB49 1132 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 ZNF248Q8NDW4 579 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 ZNF548Q8NEK5 533 aaPredicted RBP8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 GRIN3AQ8TCU5 1115 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 CPLX3Q8WVH0 158 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 TTC9Q92623 222 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 ZNF653Q96CK0 615 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 ARHGEF26Q96DR7 871 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 IFT43Q96FT9 208 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 NAF1Q96HR8 494 aaKnown RBP8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 BMFQ96LC9 184 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 ZNF578Q96N58 590 aaPredicted RBP8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 DEPDC7Q96QD5 511 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 PEBP4Q96S96 227 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 LGMNQ99538 433 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 DNAJC7Q99615 494 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 CNPY3Q9BT09 278 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 MUC3BQ9H195 1237 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 RBSNQ9H1K0 784 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 OSBPL2Q9H1P3 480 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 TNKS2Q9H2K2 1166 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 CPNE5Q9HCH3 593 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 NDFIP2Q9NV92 336 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 TMEM51Q9NW97 253 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 MPP6Q9NZW5 540 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 PPARGC1AQ9UBK2 798 aaKnown RBP8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 CNOT8Q9UFF9 292 aaKnown RBP8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 KLF15Q9UIH9 416 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 LUC7L2Q9Y383 392 aaKnown RBP8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 PAXBP1Q9Y5B6 917 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 DOPEY2Q9Y3R5 2298 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 NBASA2RRP1 2371 aa8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 ZFC3H1O60293 1989 aaKnown RBP8.06□□□□□ -1.12
CDC42BPA-210ENST00000462553 SPTY2D1-AS1A0A0U1RR47 76 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 TMEM191CA6NGB0 347 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 A6NNZ2 444 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 SCAMP1O15126 338 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 MFAP3LO75121 409 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 USP12O75317 370 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 LEFTY1O75610 366 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 LRIG2O94898 1065 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 CD160O95971 181 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 PRNPP04156 253 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 ADRB3P13945 408 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 NME1P15531 152 aaKnown RBP8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 TGM2P21980 687 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 ITGB7P26010 798 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 LSSP48449 732 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 PDX1P52945 283 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 TMPRSS3P57727 454 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 ARF5P84085 180 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 CFHR1Q03591 330 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 DSG2Q14126 1118 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 TRIM14Q14142 442 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 ACBD5Q5T8D3 534 aaPredicted RBP8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 GUSBP11Q6P575 273 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 IGF2-ASQ6U949 168 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 Q6ZSR6 202 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 PARS2Q7L3T8 475 aaKnown RBP8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 TFAP2DQ7Z6R9 452 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 SETD3Q86TU7 594 aaPredicted RBP8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 PYROXD2Q8N2H3 581 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 OR7D4Q8NG98 312 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 IFI44Q8TCB0 444 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 FNIP1Q8TF40 1166 aa8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 SNRNP27Q8WVK2 155 aaKnown RBP8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 PRR11Q96HE9 360 aaPredicted RBP8.05□□□□□ -1.12
CDC42BPA-210ENST00000462553 PPP1R9BQ96SB3 815 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms