RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 MRASO14807 208 aa18.61■□□□□ 0.57
HPS3-204ENST00000462030 MT-CYBP00156 380 aaPredicted RBP18.61■□□□□ 0.57
HPS3-204ENST00000462030 MT-CO1P00395 513 aa18.61■□□□□ 0.57
HPS3-204ENST00000462030 SLC1A2P43004 574 aa18.61■□□□□ 0.57
HPS3-204ENST00000462030 TRAP1Q12931 704 aaKnown RBP18.61■□□□□ 0.57
HPS3-204ENST00000462030 MARCH8Q5T0T0 291 aa18.61■□□□□ 0.57
HPS3-204ENST00000462030 PKN3Q6P5Z2 889 aa18.61■□□□□ 0.57
HPS3-204ENST00000462030 ALKAL1Q6UXT8 129 aa18.61■□□□□ 0.57
HPS3-204ENST00000462030 CLEC20AQ6ZU45 233 aa18.61■□□□□ 0.57
HPS3-204ENST00000462030 CNTN4Q8IWV2 1026 aa18.61■□□□□ 0.57
HPS3-204ENST00000462030 HNRNPABQ99729 332 aaKnown RBP18.61■□□□□ 0.57
HPS3-204ENST00000462030 CDHR5Q9HBB8 845 aa18.61■□□□□ 0.57
HPS3-204ENST00000462030 UBQLN1Q9UMX0 589 aaKnown RBP18.61■□□□□ 0.57
HPS3-204ENST00000462030 PDCD11Q14690 1871 aaKnown RBP18.61■□□□□ 0.57
HPS3-204ENST00000462030 IMPDH2P12268 514 aa18.61■□□□□ 0.57
HPS3-204ENST00000462030 YBX3P16989 372 aaKnown RBP eCLIP18.61■□□□□ 0.57
HPS3-204ENST00000462030 MAP3K7CLP57077 242 aa18.61■□□□□ 0.57
HPS3-204ENST00000462030 CTBSQ01459 385 aa18.61■□□□□ 0.57
HPS3-204ENST00000462030 MAPRE2Q15555 327 aa18.61■□□□□ 0.57
HPS3-204ENST00000462030 CATSPER4Q7RTX7 472 aa18.61■□□□□ 0.57
HPS3-204ENST00000462030 FNDC8Q8TC99 324 aa18.61■□□□□ 0.57
HPS3-204ENST00000462030 NTAN1Q96AB6 310 aa18.61■□□□□ 0.57
HPS3-204ENST00000462030 MRPL57Q9BQC6 102 aaKnown RBP18.61■□□□□ 0.57
HPS3-204ENST00000462030 ULBP1Q9BZM6 244 aa18.61■□□□□ 0.57
HPS3-204ENST00000462030 CLK4Q9HAZ1 481 aaKnown RBP18.61■□□□□ 0.57
HPS3-204ENST00000462030 CHST12Q9NRB3 414 aa18.61■□□□□ 0.57
HPS3-204ENST00000462030 EBF1Q9UH73 591 aa18.61■□□□□ 0.57
HPS3-204ENST00000462030 ZNF510Q9Y2H8 683 aa18.61■□□□□ 0.57
HPS3-204ENST00000462030 AURKAO14965 403 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 MTSS1O43312 755 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 SLC25A27O95847 323 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 GNAO1P09471 354 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 ATP5F1P24539 256 aaPredicted RBP18.6■□□□□ 0.57
HPS3-204ENST00000462030 PLK1P53350 603 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 PRKCQQ04759 706 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 SOX4Q06945 474 aaPredicted RBP18.6■□□□□ 0.57
HPS3-204ENST00000462030 SCAPQ12770 1279 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 CSHL1Q14406 222 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 UGP2Q16851 508 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 DALRD3Q5D0E6 543 aaKnown RBP18.6■□□□□ 0.57
HPS3-204ENST00000462030 ZNF772Q68DY9 489 aaPredicted RBP18.6■□□□□ 0.57
HPS3-204ENST00000462030 RNF135Q8IUD6 432 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 CANT1Q8WVQ1 401 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 DPF3Q92784 378 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 PBXIP1Q96AQ6 731 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 DUS3LQ96G46 650 aaKnown RBP18.6■□□□□ 0.57
HPS3-204ENST00000462030 TNIP3Q96KP6 325 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 BIRC8Q96P09 236 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 SLC9A7Q96T83 725 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 C16orf70Q9BSU1 422 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 MEAF6Q9HAF1 191 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 GDAP2Q9NXN4 497 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 RRN3Q9NYV6 651 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 TMEM181Q9P2C4 612 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 RBPJLQ9UBG7 517 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 SFMBT1Q9UHJ3 866 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 FNDC1Q4ZHG4 1894 aaPredicted RBP18.6■□□□□ 0.57
HPS3-204ENST00000462030 SAC3D1A6NKF1 404 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 FAM155AB1AL88 458 aaPredicted RBP18.6■□□□□ 0.57
HPS3-204ENST00000462030 SRP72O76094 671 aaKnown RBP18.6■□□□□ 0.57
HPS3-204ENST00000462030 SNRPB2P08579 225 aaKnown RBP18.6■□□□□ 0.57
HPS3-204ENST00000462030 ATP6V1B2P21281 511 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 ARCN1P48444 511 aaKnown RBP18.6■□□□□ 0.57
HPS3-204ENST00000462030 ENTPD1P49961 510 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 SLC7A2P52569 658 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 TUBA4AP68366 448 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 PRPSAP1Q14558 356 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 PCID2Q5JVF3 399 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 ARHGAP36Q6ZRI8 547 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 CUZD1Q86UP6 607 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 RBM12BQ8IXT5 1001 aaKnown RBP18.6■□□□□ 0.57
HPS3-204ENST00000462030 KLHL23Q8NBE8 558 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 HM13Q8TCT9 377 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 IGSF5Q9NSI5 407 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 DDIT4Q9NX09 232 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 FBXW11Q9UKB1 542 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 CROTQ9UKG9 612 aa18.6■□□□□ 0.57
HPS3-204ENST00000462030 FAF1Q9UNN5 650 aaPredicted RBP18.6■□□□□ 0.57
HPS3-204ENST00000462030 SMIM28A0A1B0GU29 152 aa18.59■□□□□ 0.57
HPS3-204ENST00000462030 AKAP10O43572 662 aa18.59■□□□□ 0.57
HPS3-204ENST00000462030 BMP10O95393 424 aa18.59■□□□□ 0.57
HPS3-204ENST00000462030 DNAJB1P25685 340 aa18.59■□□□□ 0.57
HPS3-204ENST00000462030 YWHAQP27348 245 aa18.59■□□□□ 0.57
HPS3-204ENST00000462030 LRPAP1P30533 357 aa18.59■□□□□ 0.57
HPS3-204ENST00000462030 GRIA3P42263 894 aa18.59■□□□□ 0.57
HPS3-204ENST00000462030 DNAJB13P59910 316 aa18.59■□□□□ 0.57
HPS3-204ENST00000462030 GRIK4Q16099 956 aa18.59■□□□□ 0.57
HPS3-204ENST00000462030 RBM20Q5T481 1227 aaKnown RBP18.59■□□□□ 0.57
HPS3-204ENST00000462030 CLVS1Q8IUQ0 354 aaPredicted RBP18.59■□□□□ 0.57
HPS3-204ENST00000462030 IPMKQ8NFU5 416 aa18.59■□□□□ 0.57
HPS3-204ENST00000462030 PPP1R13LQ8WUF5 828 aa18.59■□□□□ 0.57
HPS3-204ENST00000462030 TFAP2CQ92754 450 aa18.59■□□□□ 0.57
HPS3-204ENST00000462030 ZNF419Q96HQ0 510 aaPredicted RBP18.59■□□□□ 0.57
HPS3-204ENST00000462030 ZNF560Q96MR9 790 aa18.59■□□□□ 0.57
HPS3-204ENST00000462030 VAT1Q99536 393 aa18.59■□□□□ 0.57
HPS3-204ENST00000462030 FAM49AQ9H0Q0 323 aaPredicted RBP18.59■□□□□ 0.57
HPS3-204ENST00000462030 SLC8A2Q9UPR5 921 aa18.59■□□□□ 0.57
HPS3-204ENST00000462030 COL1A2P08123 1366 aa18.59■□□□□ 0.57
HPS3-204ENST00000462030 A8MT66 165 aa18.59■□□□□ 0.57
HPS3-204ENST00000462030 UGT1A6P19224 532 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms