RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 VPS36Q86VN1 386 aa21.14■□□□□ 0.97
SRM-202ENST00000459997 PROSER1Q86XN7 944 aa21.14■□□□□ 0.97
SRM-202ENST00000459997 PSTKQ8IV42 348 aaKnown RBP21.14■□□□□ 0.97
SRM-202ENST00000459997 MDM1Q8TC05 714 aa21.14■□□□□ 0.97
SRM-202ENST00000459997 CPLX3Q8WVH0 158 aa21.14■□□□□ 0.97
SRM-202ENST00000459997 ASB12Q8WXK4 309 aa21.14■□□□□ 0.97
SRM-202ENST00000459997 SYN2Q92777 582 aaPredicted RBP21.14■□□□□ 0.97
SRM-202ENST00000459997 IFT43Q96FT9 208 aa21.14■□□□□ 0.97
SRM-202ENST00000459997 CPEB1Q9BZB8 566 aaKnown RBP21.14■□□□□ 0.97
SRM-202ENST00000459997 GPR27Q9NS67 375 aa21.14■□□□□ 0.97
SRM-202ENST00000459997 DKK3Q9UBP4 350 aa21.14■□□□□ 0.97
SRM-202ENST00000459997 CHD6Q8TD26 2715 aa21.13■□□□□ 0.97
SRM-202ENST00000459997 TAF4O00268 1085 aa21.13■□□□□ 0.97
SRM-202ENST00000459997 PIAS2O75928 621 aa21.13■□□□□ 0.97
SRM-202ENST00000459997 TIMP2P16035 220 aa21.13■□□□□ 0.97
SRM-202ENST00000459997 ITIH2P19823 946 aa21.13■□□□□ 0.97
SRM-202ENST00000459997 XPAP23025 273 aaPredicted RBP21.13■□□□□ 0.97
SRM-202ENST00000459997 ZNF211Q13398 564 aaPredicted RBP21.13■□□□□ 0.97
SRM-202ENST00000459997 FZD2Q14332 565 aa21.13■□□□□ 0.97
SRM-202ENST00000459997 PROX2Q3B8N5 592 aa21.13■□□□□ 0.97
SRM-202ENST00000459997 HS1BP3Q53T59 392 aa21.13■□□□□ 0.97
SRM-202ENST00000459997 AFMIDQ63HM1 303 aa21.13■□□□□ 0.97
SRM-202ENST00000459997 TMPRSS12Q86WS5 348 aa21.13■□□□□ 0.97
SRM-202ENST00000459997 NPWQ8N729 165 aa21.13■□□□□ 0.97
SRM-202ENST00000459997 DENND6BQ8NEG7 585 aa21.13■□□□□ 0.97
SRM-202ENST00000459997 CXorf40AQ8TE69 158 aa21.13■□□□□ 0.97
SRM-202ENST00000459997 TSPY26PQ9H489 355 aa21.13■□□□□ 0.97
SRM-202ENST00000459997 IPO11Q9UI26 975 aaKnown RBP21.13■□□□□ 0.97
SRM-202ENST00000459997 SPTY2D1-AS1A0A0U1RR47 76 aa21.12■□□□□ 0.97
SRM-202ENST00000459997 DFFAO00273 331 aa21.12■□□□□ 0.97
SRM-202ENST00000459997 MMP20O60882 483 aa21.12■□□□□ 0.97
SRM-202ENST00000459997 SERPING1P05155 500 aa21.12■□□□□ 0.97
SRM-202ENST00000459997 PCK1P35558 622 aa21.12■□□□□ 0.97
SRM-202ENST00000459997 HNF1BP35680 557 aa21.12■□□□□ 0.97
SRM-202ENST00000459997 HCAR3P49019 387 aa21.12■□□□□ 0.97
SRM-202ENST00000459997 ZNF135P52742 658 aaPredicted RBP21.12■□□□□ 0.97
SRM-202ENST00000459997 CLDN6P56747 220 aa21.12■□□□□ 0.97
SRM-202ENST00000459997 ZBED6P86452 979 aa21.12■□□□□ 0.97
SRM-202ENST00000459997 PDE1CQ14123 709 aaPredicted RBP21.12■□□□□ 0.97
SRM-202ENST00000459997 GRM3Q14832 879 aa21.12■□□□□ 0.97
SRM-202ENST00000459997 ACAP1Q15027 740 aa21.12■□□□□ 0.97
SRM-202ENST00000459997 KDM7AQ6ZMT4 941 aa21.12■□□□□ 0.97
SRM-202ENST00000459997 PARGQ86W56 976 aa21.12■□□□□ 0.97
SRM-202ENST00000459997 ARHGAP12Q8IWW6 846 aa21.12■□□□□ 0.97
SRM-202ENST00000459997 OR4C6Q8NH72 309 aa21.12■□□□□ 0.97
SRM-202ENST00000459997 IQCDQ96DY2 449 aa21.12■□□□□ 0.97
SRM-202ENST00000459997 WRAP53Q9BUR4 548 aaKnown RBP21.12■□□□□ 0.97
SRM-202ENST00000459997 ZWILCHQ9H900 591 aa21.12■□□□□ 0.97
SRM-202ENST00000459997 SP110Q9HB58 689 aa21.12■□□□□ 0.97
SRM-202ENST00000459997 CWC15Q9P013 229 aaKnown RBP21.12■□□□□ 0.97
SRM-202ENST00000459997 IFNKQ9P0W0 207 aa21.12■□□□□ 0.97
SRM-202ENST00000459997 CAPN11Q9UMQ6 739 aa21.12■□□□□ 0.97
SRM-202ENST00000459997 TRABD2BA6NFA1 517 aa21.11■□□□□ 0.97
SRM-202ENST00000459997 PALMO75781 387 aa21.11■□□□□ 0.97
SRM-202ENST00000459997 TM7SF2O76062 418 aa21.11■□□□□ 0.97
SRM-202ENST00000459997 TCF4P15884 667 aa21.11■□□□□ 0.97
SRM-202ENST00000459997 IL1R2P27930 398 aa21.11■□□□□ 0.97
SRM-202ENST00000459997 HNRNPKP61978 463 aaKnown RBP eCLIP21.11■□□□□ 0.97
SRM-202ENST00000459997 DAB2P98082 770 aa21.11■□□□□ 0.97
SRM-202ENST00000459997 ILKQ13418 452 aa21.11■□□□□ 0.97
SRM-202ENST00000459997 CAMK2BQ13554 666 aa21.11■□□□□ 0.97
SRM-202ENST00000459997 DPYSQ14117 519 aa21.11■□□□□ 0.97
SRM-202ENST00000459997 SMTNL2Q2TAL5 461 aa21.11■□□□□ 0.97
SRM-202ENST00000459997 CFAP58Q5T655 872 aa21.11■□□□□ 0.97
SRM-202ENST00000459997 ARHGAP36Q6ZRI8 547 aa21.11■□□□□ 0.97
SRM-202ENST00000459997 CENPTQ96BT3 561 aa21.11■□□□□ 0.97
SRM-202ENST00000459997 C1QTNF7Q9BXJ2 289 aa21.11■□□□□ 0.97
SRM-202ENST00000459997 THAP2Q9H0W7 228 aa21.11■□□□□ 0.97
SRM-202ENST00000459997 SUV39H2Q9H5I1 410 aa21.11■□□□□ 0.97
SRM-202ENST00000459997 LUC7L2Q9Y383 392 aaKnown RBP21.11■□□□□ 0.97
SRM-202ENST00000459997 H3BRJ5 948 aa21.1■□□□□ 0.97
SRM-202ENST00000459997 CSF2P04141 144 aa21.1■□□□□ 0.97
SRM-202ENST00000459997 ALPPL2P10696 532 aa21.1■□□□□ 0.97
SRM-202ENST00000459997 JUPP14923 745 aa21.1■□□□□ 0.97
SRM-202ENST00000459997 NME1P15531 152 aaKnown RBP21.1■□□□□ 0.97
SRM-202ENST00000459997 ACP1P24666 158 aa21.1■□□□□ 0.97
SRM-202ENST00000459997 IGFALSP35858 605 aa21.1■□□□□ 0.97
SRM-202ENST00000459997 RGRP47804 291 aa21.1■□□□□ 0.97
SRM-202ENST00000459997 SUOXP51687 545 aa21.1■□□□□ 0.97
SRM-202ENST00000459997 PFN3P60673 137 aa21.1■□□□□ 0.97
SRM-202ENST00000459997 ELP6Q0PNE2 266 aa21.1■□□□□ 0.97
SRM-202ENST00000459997 PIGHQ14442 188 aaPredicted RBP21.1■□□□□ 0.97
SRM-202ENST00000459997 TPRG1LQ5T0D9 272 aa21.1■□□□□ 0.97
SRM-202ENST00000459997 HES3Q5TGS1 186 aa21.1■□□□□ 0.97
SRM-202ENST00000459997 PDCD7Q8N8D1 485 aaKnown RBP21.1■□□□□ 0.97
SRM-202ENST00000459997 TSEN2Q8NCE0 465 aaKnown RBP21.1■□□□□ 0.97
SRM-202ENST00000459997 HCAR2Q8TDS4 363 aa21.1■□□□□ 0.97
SRM-202ENST00000459997 HSPH1Q92598 858 aa21.1■□□□□ 0.97
SRM-202ENST00000459997 ZNF641Q96N77 438 aaPredicted RBP21.1■□□□□ 0.97
SRM-202ENST00000459997 TUBGCP5Q96RT8 1024 aa21.1■□□□□ 0.97
SRM-202ENST00000459997 CINPQ9BW66 212 aaPredicted RBP21.1■□□□□ 0.97
SRM-202ENST00000459997 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.1■□□□□ 0.97
SRM-202ENST00000459997 NLGN3Q9NZ94 848 aa21.1■□□□□ 0.97
SRM-202ENST00000459997 TDRD6O60522 2096 aaKnown RBP21.09■□□□□ 0.97
SRM-202ENST00000459997 A0A087X0T9 212 aa21.09■□□□□ 0.97
SRM-202ENST00000459997 TSPAN11A1L157 253 aa21.09■□□□□ 0.97
SRM-202ENST00000459997 NEMP2A6NFY4 417 aa21.09■□□□□ 0.97
SRM-202ENST00000459997 H3BM21 787 aa21.09■□□□□ 0.97
SRM-202ENST00000459997 BUB1BO60566 1050 aaPredicted RBP21.09■□□□□ 0.97
SRM-202ENST00000459997 GYPCP04921 128 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms