RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 DCDC2Q9UHG0 476 aa8.21□□□□□ -1.09
LINC00954-202ENST00000449086 UBQLN1Q9UMX0 589 aaKnown RBP8.21□□□□□ -1.09
LINC00954-202ENST00000449086 AP4S1Q9Y587 144 aa8.21□□□□□ -1.09
LINC00954-202ENST00000449086 C1orf232A0A0U1RR37 186 aa8.21□□□□□ -1.1
LINC00954-202ENST00000449086 KANSL1LA0AUZ9 987 aa8.21□□□□□ -1.1
LINC00954-202ENST00000449086 SAC3D1A6NKF1 404 aa8.21□□□□□ -1.1
LINC00954-202ENST00000449086 LSM1O15116 133 aaKnown RBP8.21□□□□□ -1.1
LINC00954-202ENST00000449086 TPD52L2O43399 206 aaKnown RBP8.21□□□□□ -1.1
LINC00954-202ENST00000449086 CXCL8P10145 99 aa8.21□□□□□ -1.1
LINC00954-202ENST00000449086 CCDC130P13994 396 aa8.21□□□□□ -1.1
LINC00954-202ENST00000449086 LAG3P18627 525 aa8.21□□□□□ -1.1
LINC00954-202ENST00000449086 CDH3P22223 829 aa8.21□□□□□ -1.1
LINC00954-202ENST00000449086 MPSTP25325 297 aa8.21□□□□□ -1.1
LINC00954-202ENST00000449086 NFKBIAP25963 317 aa8.21□□□□□ -1.1
LINC00954-202ENST00000449086 RPL9P32969 192 aaKnown RBP8.21□□□□□ -1.1
LINC00954-202ENST00000449086 SOX11P35716 441 aa8.21□□□□□ -1.1
LINC00954-202ENST00000449086 PGGT1BP53609 377 aa8.21□□□□□ -1.1
LINC00954-202ENST00000449086 CDH8P55286 799 aa8.21□□□□□ -1.1
LINC00954-202ENST00000449086 NEDD8Q15843 81 aa8.21□□□□□ -1.1
LINC00954-202ENST00000449086 ZNF423Q2M1K9 1284 aa8.21□□□□□ -1.1
LINC00954-202ENST00000449086 FGD3Q5JSP0 725 aa8.21□□□□□ -1.1
LINC00954-202ENST00000449086 CENPSQ8N2Z9 138 aa8.21□□□□□ -1.1
LINC00954-202ENST00000449086 SNX31Q8N9S9 440 aa8.21□□□□□ -1.1
LINC00954-202ENST00000449086 CLP1Q92989 425 aaKnown RBP8.21□□□□□ -1.1
LINC00954-202ENST00000449086 PLEKHA8Q96JA3 519 aa8.21□□□□□ -1.1
LINC00954-202ENST00000449086 AGAP3Q96P47 875 aa8.21□□□□□ -1.1
LINC00954-202ENST00000449086 ZBED2Q9BTP6 218 aa8.21□□□□□ -1.1
LINC00954-202ENST00000449086 FRMD8P1Q9BZ68 369 aaPredicted RBP8.21□□□□□ -1.1
LINC00954-202ENST00000449086 UNKQ9C0B0 810 aaKnown RBP8.21□□□□□ -1.1
LINC00954-202ENST00000449086 CDH19Q9H159 772 aa8.21□□□□□ -1.1
LINC00954-202ENST00000449086 CAB39LQ9H9S4 337 aa8.21□□□□□ -1.1
LINC00954-202ENST00000449086 CLK4Q9HAZ1 481 aaKnown RBP8.21□□□□□ -1.1
LINC00954-202ENST00000449086 PNPLA8Q9NP80 782 aa8.21□□□□□ -1.1
LINC00954-202ENST00000449086 SPATA7Q9P0W8 599 aa8.21□□□□□ -1.1
LINC00954-202ENST00000449086 MSRAQ9UJ68 235 aa8.21□□□□□ -1.1
LINC00954-202ENST00000449086 PRPF19Q9UMS4 504 aaKnown RBP8.21□□□□□ -1.1
LINC00954-202ENST00000449086 EFR3BQ9Y2G0 817 aa8.21□□□□□ -1.1
LINC00954-202ENST00000449086 HES2Q9Y543 173 aa8.21□□□□□ -1.1
LINC00954-202ENST00000449086 ANK1P16157 1881 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 ANKRD12Q6UB98 2062 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 SMIM28A0A1B0GU29 152 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 TMEM189-UBE2V1I3L0A0 370 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 PTGESO14684 152 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 TLL1O43897 1013 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 ADAM23O75077 832 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 ATE1O95260 518 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 FUCA1P04066 466 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 GSTT2P0CG29 244 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 GSTT2BP0CG30 244 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 PDGFRAP16234 1089 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 AKAP5P24588 427 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 LRPAP1P30533 357 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 DPP6P42658 865 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 GLRBP48167 497 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 GNA12Q03113 381 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 TRAF2Q12933 501 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 NME3Q13232 169 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 TUSC3Q13454 348 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 DLG2Q15700 870 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 LSM12Q3MHD2 195 aaKnown RBP8.2□□□□□ -1.1
LINC00954-202ENST00000449086 PIGGQ5H8A4 983 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 EGFLAMQ63HQ2 1017 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 KCNT2Q6UVM3 1135 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 NAPRTQ6XQN6 538 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 CHST15Q7LFX5 561 aaPredicted RBP8.2□□□□□ -1.1
LINC00954-202ENST00000449086 CHERPQ8IWX8 916 aaKnown RBP8.2□□□□□ -1.1
LINC00954-202ENST00000449086 SLC15A3Q8IY34 581 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 FIBCD1Q8N539 461 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 BEST2Q8NFU1 509 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 SREK1Q8WXA9 508 aaKnown RBP8.2□□□□□ -1.1
LINC00954-202ENST00000449086 LPPQ93052 612 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 PEBP4Q96S96 227 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 GAD1Q99259 594 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 EFCAB1Q9HAE3 211 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 PNPLA3Q9NST1 481 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 TBC1D13Q9NVG8 400 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 IGSF9Q9P2J2 1179 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 CYTH4Q9UIA0 394 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 AURKCQ9UQB9 309 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 CITO14578 2027 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 CCDC78A2IDD5 438 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 FAM159BA6NKW6 160 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 TBKBP1A7MCY6 615 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 LACTBL1A8MY62 500 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 H3BNH8 94 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 ZNF195O14628 629 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 TIPRLO75663 272 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 VAPBO95292 243 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 LSM8O95777 96 aaKnown RBP8.2□□□□□ -1.1
LINC00954-202ENST00000449086 TRUB2O95900 331 aaKnown RBP8.2□□□□□ -1.1
LINC00954-202ENST00000449086 GNAO1P09471 354 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 ZNF26P17031 533 aaPredicted RBP8.2□□□□□ -1.1
LINC00954-202ENST00000449086 PPARGP37231 505 aaPredicted RBP8.2□□□□□ -1.1
LINC00954-202ENST00000449086 BCAP31P51572 246 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 NR1D2Q14995 579 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 TMEM132DQ14C87 1099 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 LDLRAP1Q5SW96 308 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 SETD3Q86TU7 594 aaPredicted RBP8.2□□□□□ -1.1
LINC00954-202ENST00000449086 TMEM192Q8IY95 271 aa8.2□□□□□ -1.1
LINC00954-202ENST00000449086 PLD6Q8N2A8 252 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms