RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 PPIL2Q13356 520 aa16.17■□□□□ 0.18
CNOT3-204ENST00000447684 ZNF846Q147U1 533 aa16.17■□□□□ 0.18
CNOT3-204ENST00000447684 SPANXN3Q5MJ09 141 aa16.17■□□□□ 0.18
CNOT3-204ENST00000447684 HMGCLL1Q8TB92 370 aa16.17■□□□□ 0.18
CNOT3-204ENST00000447684 HDAC10Q969S8 669 aa16.17■□□□□ 0.18
CNOT3-204ENST00000447684 SH3YL1Q96HL8 342 aaPredicted RBP16.17■□□□□ 0.18
CNOT3-204ENST00000447684 ZNF347Q96SE7 839 aa16.17■□□□□ 0.18
CNOT3-204ENST00000447684 CSF3RQ99062 836 aa16.17■□□□□ 0.18
CNOT3-204ENST00000447684 LHPPQ9H008 270 aa16.17■□□□□ 0.18
CNOT3-204ENST00000447684 PORCNQ9H237 461 aa16.17■□□□□ 0.18
CNOT3-204ENST00000447684 MRPL46Q9H2W6 279 aaKnown RBP16.17■□□□□ 0.18
CNOT3-204ENST00000447684 HMG20AQ9NP66 347 aa16.17■□□□□ 0.18
CNOT3-204ENST00000447684 CD300AQ9UGN4 299 aa16.17■□□□□ 0.18
CNOT3-204ENST00000447684 ERVK-11Q9UQG0 969 aa16.17■□□□□ 0.18
CNOT3-204ENST00000447684 NEMP2A6NFY4 417 aa16.17■□□□□ 0.18
CNOT3-204ENST00000447684 NRP2O60462 931 aa16.17■□□□□ 0.18
CNOT3-204ENST00000447684 SPCS2Q15005 226 aa16.17■□□□□ 0.18
CNOT3-204ENST00000447684 INTS11Q5TA45 600 aaKnown RBP16.17■□□□□ 0.18
CNOT3-204ENST00000447684 RNF19BQ6ZMZ0 732 aa16.17■□□□□ 0.18
CNOT3-204ENST00000447684 PID1Q7Z2X4 250 aa16.17■□□□□ 0.18
CNOT3-204ENST00000447684 FAM35AQ86V20 835 aa16.17■□□□□ 0.18
CNOT3-204ENST00000447684 PYROXD2Q8N2H3 581 aa16.17■□□□□ 0.18
CNOT3-204ENST00000447684 SGCDQ92629 289 aa16.17■□□□□ 0.18
CNOT3-204ENST00000447684 CGREF1Q99674 301 aa16.17■□□□□ 0.18
CNOT3-204ENST00000447684 IL22Q9GZX6 179 aa16.17■□□□□ 0.18
CNOT3-204ENST00000447684 ADAMTS10Q9H324 1103 aa16.17■□□□□ 0.18
CNOT3-204ENST00000447684 VRTNQ9H8Y1 702 aa16.17■□□□□ 0.18
CNOT3-204ENST00000447684 SMPD3Q9NY59 655 aaPredicted RBP16.17■□□□□ 0.18
CNOT3-204ENST00000447684 TLL2Q9Y6L7 1015 aa16.17■□□□□ 0.18
CNOT3-204ENST00000447684 KCNK1O00180 336 aa16.16■□□□□ 0.18
CNOT3-204ENST00000447684 INPP4BO15327 924 aa16.16■□□□□ 0.18
CNOT3-204ENST00000447684 SBK3P0C264 359 aa16.16■□□□□ 0.18
CNOT3-204ENST00000447684 GOT1P17174 413 aa16.16■□□□□ 0.18
CNOT3-204ENST00000447684 TPH1P17752 444 aa16.16■□□□□ 0.18
CNOT3-204ENST00000447684 MAGEA12P43365 314 aa16.16■□□□□ 0.18
CNOT3-204ENST00000447684 ANO4Q32M45 955 aa16.16■□□□□ 0.18
CNOT3-204ENST00000447684 XKR3Q5GH77 459 aa16.16■□□□□ 0.18
CNOT3-204ENST00000447684 PACRGLQ8N7B6 248 aa16.16■□□□□ 0.18
CNOT3-204ENST00000447684 C12orf29Q8N999 325 aa16.16■□□□□ 0.18
CNOT3-204ENST00000447684 ANKRD52Q8NB46 1076 aa16.16■□□□□ 0.18
CNOT3-204ENST00000447684 RAB2BQ8WUD1 216 aa16.16■□□□□ 0.18
CNOT3-204ENST00000447684 LRRC40Q9H9A6 602 aa16.16■□□□□ 0.18
CNOT3-204ENST00000447684 CCM2LQ9NUG4 571 aaPredicted RBP16.16■□□□□ 0.18
CNOT3-204ENST00000447684 ARMC1Q9NVT9 282 aa16.16■□□□□ 0.18
CNOT3-204ENST00000447684 HSPA1AP0DMV8 641 aaKnown RBP16.16■□□□□ 0.18
CNOT3-204ENST00000447684 HSPA1BP0DMV9 641 aaKnown RBP16.16■□□□□ 0.18
CNOT3-204ENST00000447684 NPR1P16066 1061 aa16.16■□□□□ 0.18
CNOT3-204ENST00000447684 HLCSP50747 726 aa16.16■□□□□ 0.18
CNOT3-204ENST00000447684 PRKAA2P54646 552 aa16.16■□□□□ 0.18
CNOT3-204ENST00000447684 BAATQ14032 418 aaPredicted RBP16.16■□□□□ 0.18
CNOT3-204ENST00000447684 CAPRIN1Q14444 709 aaKnown RBP16.16■□□□□ 0.18
CNOT3-204ENST00000447684 POLD3Q15054 466 aaPredicted RBP16.16■□□□□ 0.18
CNOT3-204ENST00000447684 KCNMB4Q86W47 210 aa16.16■□□□□ 0.18
CNOT3-204ENST00000447684 CDAN1Q8IWY9 1227 aa16.16■□□□□ 0.18
CNOT3-204ENST00000447684 ANKRD13AQ8IZ07 590 aa16.16■□□□□ 0.18
CNOT3-204ENST00000447684 P2RY11Q96G91 374 aa16.16■□□□□ 0.18
CNOT3-204ENST00000447684 CENPNQ96H22 339 aaPredicted RBP16.16■□□□□ 0.18
CNOT3-204ENST00000447684 CSPG4P5Q96PW8 444 aa16.16■□□□□ 0.18
CNOT3-204ENST00000447684 B3GNT5Q9BYG0 378 aa16.16■□□□□ 0.18
CNOT3-204ENST00000447684 TBC1D13Q9NVG8 400 aa16.16■□□□□ 0.18
CNOT3-204ENST00000447684 TMEM181Q9P2C4 612 aa16.16■□□□□ 0.18
CNOT3-204ENST00000447684 VANGL2Q9ULK5 521 aa16.16■□□□□ 0.18
CNOT3-204ENST00000447684 SYNJ2BP-COX16A0A087WUM0 186 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 TIMM44O43615 452 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 XYLBO75191 536 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 APOA4P06727 396 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 NEK2P51955 445 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 TSPY1Q01534 308 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 GRM1Q13255 1194 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 CAPSQ13938 189 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 CYP51A1Q16850 503 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 CCNYL2Q5T2Q4 361 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 IQSEC1Q6DN90 963 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 CNSTQ6PJW8 725 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 CRTC3Q6UUV7 619 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 VASH1Q7L8A9 365 aaPredicted RBP16.15■□□□□ 0.18
CNOT3-204ENST00000447684 KRT27Q7Z3Y8 459 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 SLC41A1Q8IVJ1 513 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 USP33Q8TEY7 942 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 SEZ6LQ9BYH1 1024 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 NOL6Q9H6R4 1146 aaKnown RBP16.15■□□□□ 0.18
CNOT3-204ENST00000447684 AGPAT4Q9NRZ5 378 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 COX16Q9P0S2 106 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 KLQ9UEF7 1012 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 TSPAN16Q9UKR8 245 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 PTPRFP10586 1907 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 ZBBXA8MT70 800 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 NR5A2O00482 541 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 JRKO75564 520 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 NR3C2P08235 984 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 RPS9P46781 194 aaKnown RBP16.15■□□□□ 0.18
CNOT3-204ENST00000447684 PLK1P53350 603 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 CLCQ05315 142 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 PIGFQ07326 219 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 GRSF1Q12849 480 aaKnown RBP eCLIP16.15■□□□□ 0.18
CNOT3-204ENST00000447684 SELENBP1Q13228 472 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 SQLEQ14534 574 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 KIF19Q2TAC6 998 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 INAVAQ3KP66 663 aa16.15■□□□□ 0.18
CNOT3-204ENST00000447684 CYBRD1Q53TN4 286 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms