RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 VAV1P15498 845 aa10.6□□□□□ -0.71
CPNE1-214ENST00000435747 MTIF2P46199 727 aaKnown RBP10.6□□□□□ -0.71
CPNE1-214ENST00000435747 GABRB2P47870 512 aa10.6□□□□□ -0.71
CPNE1-214ENST00000435747 ADKP55263 362 aaKnown RBP10.6□□□□□ -0.71
CPNE1-214ENST00000435747 TAS2R38P59533 333 aa10.6□□□□□ -0.71
CPNE1-214ENST00000435747 CDC20Q12834 499 aa10.6□□□□□ -0.71
CPNE1-214ENST00000435747 C1orf61Q13536 156 aa10.6□□□□□ -0.71
CPNE1-214ENST00000435747 CDH18Q13634 790 aa10.6□□□□□ -0.71
CPNE1-214ENST00000435747 EIF2S3LQ2VIR3 472 aaKnown RBP10.6□□□□□ -0.71
CPNE1-214ENST00000435747 DEFB109BQ30KR1 87 aa10.6□□□□□ -0.71
CPNE1-214ENST00000435747 C5orf22Q49AR2 442 aa10.6□□□□□ -0.71
CPNE1-214ENST00000435747 HSP90AA4PQ58FG1 418 aa10.6□□□□□ -0.71
CPNE1-214ENST00000435747 TCP11X2Q5H9J9 407 aa10.6□□□□□ -0.71
CPNE1-214ENST00000435747 PITRM1Q5JRX3 1037 aa10.6□□□□□ -0.71
CPNE1-214ENST00000435747 KLHDC7AQ5VTJ3 777 aa10.6□□□□□ -0.71
CPNE1-214ENST00000435747 KYAT3Q6YP21 454 aaKnown RBP10.6□□□□□ -0.71
CPNE1-214ENST00000435747 MMS22LQ6ZRQ5 1243 aa10.6□□□□□ -0.71
CPNE1-214ENST00000435747 FAM183BPQ6ZVS7 135 aa10.6□□□□□ -0.71
CPNE1-214ENST00000435747 SLC26A9Q7LBE3 791 aa10.6□□□□□ -0.71
CPNE1-214ENST00000435747 TIPARPQ7Z3E1 657 aaKnown RBP10.6□□□□□ -0.71
CPNE1-214ENST00000435747 BNIPLQ7Z465 357 aa10.6□□□□□ -0.71
CPNE1-214ENST00000435747 PASD1Q8IV76 773 aa10.6□□□□□ -0.71
CPNE1-214ENST00000435747 DEFB106AQ8N104 65 aa10.6□□□□□ -0.71
CPNE1-214ENST00000435747 CARNMT1Q8N4J0 409 aa10.6□□□□□ -0.71
CPNE1-214ENST00000435747 ZNF397Q8NF99 534 aaPredicted RBP10.6□□□□□ -0.71
CPNE1-214ENST00000435747 PDCD6IPQ8WUM4 868 aaKnown RBP10.6□□□□□ -0.71
CPNE1-214ENST00000435747 BTN2A2Q8WVV5 523 aa10.6□□□□□ -0.71
CPNE1-214ENST00000435747 BTN2A3PQ96KV6 586 aa10.6□□□□□ -0.71
CPNE1-214ENST00000435747 RPL10LQ96L21 214 aaKnown RBP10.6□□□□□ -0.71
CPNE1-214ENST00000435747 LRRN3Q9H3W5 708 aa10.6□□□□□ -0.71
CPNE1-214ENST00000435747 ANLNQ9NQW6 1124 aa10.6□□□□□ -0.71
CPNE1-214ENST00000435747 GPR27Q9NS67 375 aa10.6□□□□□ -0.71
CPNE1-214ENST00000435747 GULP1Q9UBP9 304 aa10.6□□□□□ -0.71
CPNE1-214ENST00000435747 GGT7Q9UJ14 662 aa10.6□□□□□ -0.71
CPNE1-214ENST00000435747 RABGEF1Q9UJ41 708 aa10.6□□□□□ -0.71
CPNE1-214ENST00000435747 SARDHQ9UL12 918 aa10.6□□□□□ -0.71
CPNE1-214ENST00000435747 HS3ST3A1Q9Y663 406 aa10.6□□□□□ -0.71
CPNE1-214ENST00000435747 ZNF106Q9H2Y7 1883 aaKnown RBP10.59□□□□□ -0.71
CPNE1-214ENST00000435747 TYW5A2RUC4 315 aaKnown RBP10.59□□□□□ -0.71
CPNE1-214ENST00000435747 LMO7DNF2Z398 122 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 DUX1O43812 170 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 LDLRP01130 860 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 UCHL3P15374 230 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 CYP11B1P15538 503 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 TFE3P19532 575 aaPredicted RBP10.59□□□□□ -0.71
CPNE1-214ENST00000435747 TACR2P21452 398 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 ITGB7P26010 798 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 EEF1GP26641 437 aaKnown RBP10.59□□□□□ -0.71
CPNE1-214ENST00000435747 USP8P40818 1118 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 RABIFP47224 123 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 STK19P49842 368 aaPredicted RBP10.59□□□□□ -0.71
CPNE1-214ENST00000435747 IRAK1P51617 712 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 PTK2Q05397 1052 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 ZFP36L1Q07352 338 aaKnown RBP10.59□□□□□ -0.71
CPNE1-214ENST00000435747 PDE1CQ14123 709 aaPredicted RBP10.59□□□□□ -0.71
CPNE1-214ENST00000435747 PRRT3Q5FWE3 981 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 EFHC1Q5JVL4 640 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 RAP1GAP2Q684P5 730 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 CXorf57Q6NSI4 855 aaKnown RBP10.59□□□□□ -0.71
CPNE1-214ENST00000435747 TCTN3Q6NUS6 607 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 ASB18Q6ZVZ8 466 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 CREBRFQ8IUR6 639 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 ZNF683Q8IZ20 524 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 CACNA2D3Q8IZS8 1091 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 RBFAQ8N0V3 343 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 CFAP52Q8N1V2 620 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 ARL10Q8N8L6 244 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 OR52K2Q8NGK3 314 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 PRR7Q8TB68 274 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 ENOX1Q8TC92 643 aaKnown RBP10.59□□□□□ -0.71
CPNE1-214ENST00000435747 ALG14Q96F25 216 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 SLC45A3Q96JT2 553 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 BMFQ96LC9 184 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 NPY6RQ99463 290 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 DDX50Q9BQ39 737 aaKnown RBP10.59□□□□□ -0.71
CPNE1-214ENST00000435747 GANQ9H2C0 597 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 HSD3B7Q9H2F3 369 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 PLCB1Q9NQ66 1216 aa10.59□□□□□ -0.71
CPNE1-214ENST00000435747 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.59□□□□□ -0.712e-10■□□□□ 11.3
CPNE1-214ENST00000435747 AKAP7Q9P0M2 348 aaPredicted RBP10.59□□□□□ -0.71
CPNE1-214ENST00000435747 APOBEC3BQ9UH17 382 aaKnown RBP10.59□□□□□ -0.71
CPNE1-214ENST00000435747 PKDREJQ9NTG1 2253 aa10.58□□□□□ -0.72
CPNE1-214ENST00000435747 DOCK4Q8N1I0 1966 aa10.58□□□□□ -0.72
CPNE1-214ENST00000435747 ARHGAP10A1A4S6 786 aa10.58□□□□□ -0.72
CPNE1-214ENST00000435747 POM121BA6NF01 834 aa10.58□□□□□ -0.72
CPNE1-214ENST00000435747 F8VZ95 297 aa10.58□□□□□ -0.72
CPNE1-214ENST00000435747 MKRN2OSH3BPM6 223 aa10.58□□□□□ -0.72
CPNE1-214ENST00000435747 K7EM74 188 aa10.58□□□□□ -0.72
CPNE1-214ENST00000435747 EPHB6O15197 1021 aa10.58□□□□□ -0.72
CPNE1-214ENST00000435747 DIAPH2O60879 1101 aa10.58□□□□□ -0.72
CPNE1-214ENST00000435747 DAB1O75553 588 aa10.58□□□□□ -0.72
CPNE1-214ENST00000435747 GCATO75600 419 aa10.58□□□□□ -0.72
CPNE1-214ENST00000435747 GRAP2O75791 330 aa10.58□□□□□ -0.72
CPNE1-214ENST00000435747 PCDH8O95206 1070 aa10.58□□□□□ -0.72
CPNE1-214ENST00000435747 MOCS2O96007 188 aaPredicted RBP10.58□□□□□ -0.72
CPNE1-214ENST00000435747 PRKCSHP14314 528 aaPredicted RBP10.58□□□□□ -0.72
CPNE1-214ENST00000435747 ZNF18P17022 549 aa10.58□□□□□ -0.72
CPNE1-214ENST00000435747 UGT1A3P35503 534 aa10.58□□□□□ -0.72
CPNE1-214ENST00000435747 SCNN1AP37088 669 aa10.58□□□□□ -0.72
CPNE1-214ENST00000435747 PLK1P53350 603 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms