RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 ZNF687Q8N1G0 1237 aa14.4□□□□□ -0.1
SF3B1-204ENST00000414963 IPMKQ8NFU5 416 aa14.4□□□□□ -0.1
SF3B1-204ENST00000414963 AENQ8WTP8 325 aaKnown RBP14.4□□□□□ -0.1
SF3B1-204ENST00000414963 HNRNPLLQ8WVV9 542 aaKnown RBP14.4□□□□□ -0.1
SF3B1-204ENST00000414963 SHDQ96IW2 340 aa14.4□□□□□ -0.1
SF3B1-204ENST00000414963 ZNF641Q96N77 438 aaPredicted RBP14.4□□□□□ -0.1
SF3B1-204ENST00000414963 SERPINB12Q96P63 405 aa14.4□□□□□ -0.1
SF3B1-204ENST00000414963 TBL1YQ9BQ87 522 aa14.4□□□□□ -0.1
SF3B1-204ENST00000414963 HEPHQ9BQS7 1158 aa14.4□□□□□ -0.1
SF3B1-204ENST00000414963 TDRD1Q9BXT4 1180 aaKnown RBP14.4□□□□□ -0.1
SF3B1-204ENST00000414963 ATP13A3Q9H7F0 1226 aa14.4□□□□□ -0.1
SF3B1-204ENST00000414963 EVLQ9UI08 416 aaPredicted RBP14.4□□□□□ -0.1
SF3B1-204ENST00000414963 RPL26L1Q9UNX3 145 aaKnown RBP14.4□□□□□ -0.1
SF3B1-204ENST00000414963 RAI2Q9Y5P3 530 aa14.4□□□□□ -0.1
SF3B1-204ENST00000414963 STON1Q9Y6Q2 735 aa14.4□□□□□ -0.1
SF3B1-204ENST00000414963 MUC22E2RYF6 1773 aaPredicted RBP14.39□□□□□ -0.11
SF3B1-204ENST00000414963 GOLGA8MH3BSY2 632 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 NDST3O95803 873 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 PRLP01236 227 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 FAM153BP0C7A2 387 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 ATXN1LP0C7T5 689 aaKnown RBP14.39□□□□□ -0.11
SF3B1-204ENST00000414963 C7P10643 843 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 HLA-DPA1P20036 260 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 PRKCHP24723 683 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 GRIA1P42261 906 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 NPY2RP49146 381 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 BCL2L1Q07817 233 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 TRAF2Q12933 501 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 SPARCL1Q14515 664 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 SLC1A5Q15758 541 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 HIF1AQ16665 826 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 FAM153CQ494X1 144 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 FNBP1LQ5T0N5 605 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 SYCP2LQ5T4T6 812 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 EMBQ6PCB8 327 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 TRMT11Q7Z4G4 463 aaKnown RBP14.39□□□□□ -0.11
SF3B1-204ENST00000414963 GJD3Q8N144 294 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 ZNF513Q8N8E2 541 aaPredicted RBP14.39□□□□□ -0.11
SF3B1-204ENST00000414963 HCAR2Q8TDS4 363 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 CAVIN3Q969G5 261 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 ECHDC3Q96DC8 303 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 LRRC39Q96DD0 335 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 ACOX2Q99424 681 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 GABRG3Q99928 467 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 FICDQ9BVA6 458 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 FSD1LQ9BXM9 530 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 OSBPL1AQ9BXW6 950 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 TXLNGYQ9BZA5 131 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 ARHGEF3Q9NR81 526 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 PCDHGC4Q9Y5F7 938 aa14.39□□□□□ -0.11
SF3B1-204ENST00000414963 MYO18AQ92614 2054 aaKnown RBP14.38□□□□□ -0.11
SF3B1-204ENST00000414963 A0A1W2PQ67 120 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 ANTXRLA6NF34 631 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 SIN3BO75182 1162 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 USP12O75317 370 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 ERLIN1O75477 346 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 PGLSO95336 258 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 H2AFXP16104 143 aaPredicted RBP14.38□□□□□ -0.11
SF3B1-204ENST00000414963 SERPINA4P29622 427 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 NTSR1P30989 418 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 CDH17Q12864 832 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 CAMK2GQ13555 558 aaPredicted RBP14.38□□□□□ -0.11
SF3B1-204ENST00000414963 ELAVL3Q14576 367 aaKnown RBP14.38□□□□□ -0.11
SF3B1-204ENST00000414963 SLMAPQ14BN4 828 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 MAP9Q49MG5 647 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 DNAJC21Q5F1R6 531 aaKnown RBP14.38□□□□□ -0.11
SF3B1-204ENST00000414963 CENPUQ71F23 418 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 CAMK1DQ8IU85 385 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 CHPFQ8IZ52 775 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 SYNPOQ8N3V7 929 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 RYBPQ8N488 228 aaPredicted RBP14.38□□□□□ -0.11
SF3B1-204ENST00000414963 IL17RCQ8NAC3 791 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 CHST14Q8NCH0 376 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 TMIEQ8NEW7 156 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 OR52K1Q8NGK4 314 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 OR6K2Q8NGY2 324 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 IFT43Q96FT9 208 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 PWWP2AQ96N64 755 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 FAM129BQ96TA1 746 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 NELL2Q99435 816 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 ADGRE3Q9BY15 652 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 SUV39H2Q9H5I1 410 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 PRSS16Q9NQE7 514 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 CACNA2D2Q9NY47 1150 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 IL36AQ9UHA7 158 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 MRPS17Q9Y2R5 130 aaKnown RBP14.38□□□□□ -0.11
SF3B1-204ENST00000414963 WASF2Q9Y6W5 498 aa14.38□□□□□ -0.11
SF3B1-204ENST00000414963 MIA3Q5JRA6 1907 aa14.37□□□□□ -0.11
SF3B1-204ENST00000414963 TSPAN11A1L157 253 aa14.37□□□□□ -0.11
SF3B1-204ENST00000414963 KRBA1A5PL33 1030 aa14.37□□□□□ -0.11
SF3B1-204ENST00000414963 SDR42E2A6NKP2 422 aa14.37□□□□□ -0.11
SF3B1-204ENST00000414963 AVILO75366 819 aa14.37□□□□□ -0.11
SF3B1-204ENST00000414963 FGF1P05230 155 aa14.37□□□□□ -0.11
SF3B1-204ENST00000414963 CHRNB1P11230 501 aa14.37□□□□□ -0.11
SF3B1-204ENST00000414963 ALADP13716 330 aa14.37□□□□□ -0.11
SF3B1-204ENST00000414963 HLA-EP13747 358 aa14.37□□□□□ -0.11
SF3B1-204ENST00000414963 GKP32189 559 aa14.37□□□□□ -0.11
SF3B1-204ENST00000414963 TIE1P35590 1138 aa14.37□□□□□ -0.11
SF3B1-204ENST00000414963 TNNT3P45378 269 aaPredicted RBP14.37□□□□□ -0.11
SF3B1-204ENST00000414963 MSLNQ13421 630 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms