RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 PIK3R2O00459 728 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 NVLO15381 856 aaKnown RBP13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 PLRG1O43660 514 aaKnown RBP13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 TUBB4AP04350 444 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 CD70P32970 193 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 CD97P48960 835 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 RPIAP49247 311 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 DAOAP59103 153 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 SRSF6Q13247 344 aaKnown RBP13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 SPIDRQ14159 915 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 ELAVL3Q14576 367 aaKnown RBP13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 C2CD6Q53TS8 623 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 ADGRF1Q5T601 910 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 GUSBP11Q6P575 273 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 OLFML1Q6UWY5 402 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 FAM183BPQ6ZVS7 135 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 REXO1L1PQ8IX06 675 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 SYCE1Q8N0S2 351 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 FBXO39Q8N4B4 442 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 FAM174AQ8TBP5 190 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 FNIP1Q8TF40 1166 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 NAT6Q93015 286 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 FAM149B1Q96BN6 582 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 ALS2CR12Q96Q35 445 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 FAM129BQ96TA1 746 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 STRADBQ9C0K7 418 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 LACRTQ9GZZ8 138 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 POPDC2Q9HBU9 364 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 ABCC13Q9NSE7 274 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 IP6K2Q9UHH9 426 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 SALL4Q9UJQ4 1053 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 GUCA1BQ9UMX6 200 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 PCDHB11Q9Y5F2 797 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 CSNK1G3Q9Y6M4 447 aa13.8□□□□□ -0.2
RAPGEF1-204ENST00000414781 ITPR3Q14573 2671 aa13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 TCRBV5S1A1TA0A578 114 aa13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 RCCD1A6NED2 376 aa13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 TMEM191CA6NGB0 347 aa13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 GABBR2O75899 941 aa13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 AGFG2O95081 481 aa13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 IL1BP01584 269 aa13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 SRPRAP08240 638 aaKnown RBP13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 MZF1P28698 734 aaPredicted RBP13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 UGT1A5P35504 534 aa13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 PDX1P52945 283 aa13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 PIGHQ14442 188 aaPredicted RBP13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 NR0B2Q15466 257 aa13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 PPP1R15BQ5SWA1 713 aa13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 DNAAF5Q86Y56 855 aa13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 DCP2Q8IU60 420 aaKnown RBP13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 TRIM58Q8NG06 486 aa13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 HTR3CQ8WXA8 447 aa13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 GLMNQ92990 594 aa13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 MIB2Q96AX9 1013 aa13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 ARHGEF26Q96DR7 871 aa13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 MRGPRX3Q96LB0 322 aa13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 CALN1Q9BXU9 219 aa13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 PREBQ9HCU5 417 aa13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 OLA1Q9NTK5 396 aaKnown RBP13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 TMEM59LQ9UK28 342 aa13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 STAP1Q9ULZ2 295 aa13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 PLAAQ9Y263 795 aa13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 HBS1LQ9Y450 684 aaKnown RBP13.79□□□□□ -0.2
RAPGEF1-204ENST00000414781 MACROD2A1Z1Q3 448 aa13.78□□□□□ -0.2
RAPGEF1-204ENST00000414781 H3BM21 787 aa13.78□□□□□ -0.2
RAPGEF1-204ENST00000414781 LTFP02788 710 aa13.78□□□□□ -0.2
RAPGEF1-204ENST00000414781 SDC4P31431 198 aa13.78□□□□□ -0.2
RAPGEF1-204ENST00000414781 NOS2P35228 1153 aa13.78□□□□□ -0.2
RAPGEF1-204ENST00000414781 RFC1P35251 1148 aaPredicted RBP13.78□□□□□ -0.2
RAPGEF1-204ENST00000414781 DRD3P35462 400 aa13.78□□□□□ -0.2
RAPGEF1-204ENST00000414781 CSKP41240 450 aa13.78□□□□□ -0.2
RAPGEF1-204ENST00000414781 SLC1A1P43005 524 aa13.78□□□□□ -0.2
RAPGEF1-204ENST00000414781 POLE2P56282 527 aa13.78□□□□□ -0.2
RAPGEF1-204ENST00000414781 RNASE9P60153 205 aaKnown RBP13.78□□□□□ -0.2
RAPGEF1-204ENST00000414781 YWHAGP61981 247 aaKnown RBP eCLIP13.78□□□□□ -0.2
RAPGEF1-204ENST00000414781 POM121L1PQ3SYA9 428 aa13.78□□□□□ -0.2
RAPGEF1-204ENST00000414781 BSPRYQ5W0U4 402 aa13.78□□□□□ -0.2
RAPGEF1-204ENST00000414781 RAB11FIP2Q7L804 512 aa13.78□□□□□ -0.2
RAPGEF1-204ENST00000414781 PHLDB2Q86SQ0 1253 aa13.78□□□□□ -0.2
RAPGEF1-204ENST00000414781 MFN1Q8IWA4 741 aa13.78□□□□□ -0.2
RAPGEF1-204ENST00000414781 ZNF548Q8NEK5 533 aaPredicted RBP13.78□□□□□ -0.2
RAPGEF1-204ENST00000414781 RNF139Q8WU17 664 aa13.78□□□□□ -0.2
RAPGEF1-204ENST00000414781 MCEEQ96PE7 176 aa13.78□□□□□ -0.2
RAPGEF1-204ENST00000414781 METTL5Q9NRN9 209 aaKnown RBP13.78□□□□□ -0.2
RAPGEF1-204ENST00000414781 DNAJC28Q9NX36 388 aa13.78□□□□□ -0.2
RAPGEF1-204ENST00000414781 ANAPC7Q9UJX3 599 aa13.78□□□□□ -0.2
RAPGEF1-204ENST00000414781 CA5BQ9Y2D0 317 aa13.78□□□□□ -0.2
RAPGEF1-204ENST00000414781 DUSP10Q9Y6W6 482 aa13.78□□□□□ -0.2
RAPGEF1-204ENST00000414781 FAM170AA1A519 330 aa13.77□□□□□ -0.21
RAPGEF1-204ENST00000414781 YJEFN3A6XGL0 299 aa13.77□□□□□ -0.21
RAPGEF1-204ENST00000414781 E7ENQ6 273 aa13.77□□□□□ -0.21
RAPGEF1-204ENST00000414781 KIF2AO00139 706 aaPredicted RBP13.77□□□□□ -0.21
RAPGEF1-204ENST00000414781 TPP1O14773 563 aa13.77□□□□□ -0.21
RAPGEF1-204ENST00000414781 IRAK2O43187 625 aa13.77□□□□□ -0.21
RAPGEF1-204ENST00000414781 ATMINO43313 823 aaPredicted RBP13.77□□□□□ -0.21
RAPGEF1-204ENST00000414781 POLQO75417 2590 aa13.77□□□□□ -0.21
RAPGEF1-204ENST00000414781 NEBLO76041 1014 aa13.77□□□□□ -0.21
RAPGEF1-204ENST00000414781 RNF8O76064 485 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms