RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 SLC26A6Q9BXS9 759 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 KRTAP9-8Q9BYQ0 159 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 NPFFR1Q9GZQ6 430 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 LHPPQ9H008 270 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 RBM38Q9H0Z9 239 aaKnown RBP3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 C20orf141Q9NUB4 165 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 PLK2Q9NYY3 685 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 NDRG3Q9UGV2 375 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 NAALADL1Q9UQQ1 740 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 CARD8Q9Y2G2 431 aa3.99□□□□□ -1.77
HMGB1P11-201ENST00000413899 TEX13CA0A0J9YWL9 993 aa3.98□□□□□ -1.77
HMGB1P11-201ENST00000413899 BECN2A8MW95 431 aa3.98□□□□□ -1.77
HMGB1P11-201ENST00000413899 B4E171 279 aa3.98□□□□□ -1.77
HMGB1P11-201ENST00000413899 LDLRAD4O15165 306 aa3.98□□□□□ -1.77
HMGB1P11-201ENST00000413899 TACC1O75410 805 aa3.98□□□□□ -1.77
HMGB1P11-201ENST00000413899 LMO1P25800 156 aa3.98□□□□□ -1.77
HMGB1P11-201ENST00000413899 ARRB2P32121 409 aa3.98□□□□□ -1.77
HMGB1P11-201ENST00000413899 KRT9P35527 623 aa3.98□□□□□ -1.77
HMGB1P11-201ENST00000413899 THPOP40225 353 aa3.98□□□□□ -1.77
HMGB1P11-201ENST00000413899 TSPAN7P41732 249 aa3.98□□□□□ -1.77
HMGB1P11-201ENST00000413899 GABRB2P47870 512 aa3.98□□□□□ -1.77
HMGB1P11-201ENST00000413899 CLDN2P57739 230 aa3.98□□□□□ -1.77
HMGB1P11-201ENST00000413899 GPS2Q13227 327 aa3.98□□□□□ -1.77
HMGB1P11-201ENST00000413899 Q6ZTK2 550 aa3.98□□□□□ -1.77
HMGB1P11-201ENST00000413899 SFTPA2Q8IWL1 248 aa3.98□□□□□ -1.77
HMGB1P11-201ENST00000413899 OTULINQ96BN8 352 aa3.98□□□□□ -1.77
HMGB1P11-201ENST00000413899 KLHL29Q96CT2 875 aa3.98□□□□□ -1.77
HMGB1P11-201ENST00000413899 MPP4Q96JB8 637 aa3.98□□□□□ -1.77
HMGB1P11-201ENST00000413899 APOLD1Q96LR9 279 aa3.98□□□□□ -1.77
HMGB1P11-201ENST00000413899 MPHOSPH8Q99549 860 aa3.98□□□□□ -1.77
HMGB1P11-201ENST00000413899 DCLK3Q9C098 648 aa3.98□□□□□ -1.77
HMGB1P11-201ENST00000413899 TAS2R10Q9NYW0 307 aa3.98□□□□□ -1.77
HMGB1P11-201ENST00000413899 SLC45A1Q9Y2W3 748 aa3.98□□□□□ -1.77
HMGB1P11-201ENST00000413899 ARHGEF17Q96PE2 2063 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P11-201ENST00000413899 TOP2AP11388 1531 aaKnown RBP3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 PCSK5Q92824 1860 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 TYW5A2RUC4 315 aaKnown RBP3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 OR6C75A6NL08 312 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 HSPB2A8KAH6 182 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 KLRF2D3W0D1 207 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 EPB41L2O43491 1005 aaKnown RBP3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 LIASO43766 372 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 KLK8O60259 260 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 HOXB5P09067 269 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 IRF1P10914 325 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 ITGAXP20702 1163 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 POU1F1P28069 291 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 POLGP54098 1239 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 Q0VFX4 171 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 CAPSQ13938 189 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 RNPS1Q15287 305 aaKnown RBP3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 HSPB2Q16082 182 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 HIST2H2ACQ16777 129 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 FSCBQ5H9T9 825 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 FNBP1LQ5T0N5 605 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 MON1BQ7L1V2 547 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 GPAT4Q86UL3 456 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 PALB2Q86YC2 1186 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 PAF1Q8N7H5 531 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 PRR26Q8N8Z3 221 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 GPT2Q8TD30 523 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 KIF1BPQ96EK5 621 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 SAAL1Q96ER3 474 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 KLHL15Q96M94 604 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 C7orf26Q96N11 449 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 SF3B5Q9BWJ5 86 aaKnown RBP3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 SLC25A18Q9H1K4 315 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 HIF1ANQ9NWT6 349 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 FZD10Q9ULW2 581 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 A3GALT2U3KPV4 340 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 SMARCA2P51531 1590 aa3.97□□□□□ -1.77
HMGB1P11-201ENST00000413899 IGHV4-28A0A0C4DH34 117 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 A0A1B0GVT2 93 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 A0A1W2PPH5 198 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 CLEC18AA5D8T8 446 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 INAFM1C9JVW0 142 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 WNT9BO14905 357 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 NTN1O95631 604 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 MT-CYBP00156 380 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 CD4P01730 458 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 TFP02787 698 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 NAGAP17050 411 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 CHATP28329 748 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 HOXD3P31249 432 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 CPOXP36551 454 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 KCNJ4P48050 445 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 PMS2P54278 862 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 FOXG1P55316 489 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 EIF3BP55884 814 aaKnown RBP3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 ABATP80404 500 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 DDX10Q13206 875 aaKnown RBP3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 RUNX2Q13950 521 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 HNF4GQ14541 408 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 SHBQ15464 509 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 SOWAHAQ2M3V2 549 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 ESCO2Q56NI9 601 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 C8orf82Q6P1X6 216 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 ZNF549Q6P9A3 640 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 DLK2Q6UY11 383 aa3.96□□□□□ -1.78
HMGB1P11-201ENST00000413899 R3HCC1LQ7Z5L2 792 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms