RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 JMJD4Q9H9V9 463 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 CTNNA3Q9UI47 895 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 TRPC5Q9UL62 973 aaPredicted RBP2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 SLC12A4Q9UP95 1085 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 SLC8A2Q9UPR5 921 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 PCDHB2Q9Y5E7 798 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 PCDHA10Q9Y5I2 948 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 KIF27Q86VH2 1401 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 SPATA31A5Q5VU36 1347 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 SPATA31A7Q8IWB4 1347 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 CAMSAP2Q08AD1 1489 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 FGD5Q6ZNL6 1462 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 RALGAPBQ86X10 1494 aa2.64□□□□□ -1.99
HMGB3P2-201ENST00000411913 USP47Q96K76 1375 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 ANKRD30AQ9BXX3 1397 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 PLEKHH1Q9ULM0 1364 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 PCF11O94913 1555 aaKnown RBP2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 SAMD9Q5K651 1589 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 CYP3A7-CYP3A51PA0A087WV96 503 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 VWA3AA6NCI4 1184 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 GAGE12JA6NER3 117 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 STX16-NPEPL1H3BU86 382 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 STX16O14662 325 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 MBD4O95243 580 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 KLKB1P03952 638 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 TNNT1P13805 278 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 CHN1P15882 459 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 IGFBP2P18065 325 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 TNFAIP3P21580 790 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 CYP3A7P24462 503 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 NDUFS1P28331 727 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 KRT9P35527 623 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 CASP2P42575 452 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 LIFRP42702 1097 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 RXRGP48443 463 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 VEGFCP49767 419 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 RCAN1P53805 252 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 NR1H2P55055 460 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 GEMIN4P57678 1058 aaKnown RBP2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 SEC61A1P61619 476 aaKnown RBP2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 ABATP80404 500 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 RNASELQ05823 741 aaKnown RBP2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 TROAPQ12815 778 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 PDCLQ13371 301 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 GAB1Q13480 694 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 SLC39A14Q15043 492 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 ZSCAN23Q3MJ62 389 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 GLE1Q53GS7 698 aaKnown RBP2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 ZNF484Q5JVG2 852 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 WDR45BQ5MNZ6 344 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 CBWD5Q5RIA9 395 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 HYIQ5T013 277 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 FNBP1LQ5T0N5 605 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 OTUD1Q5VV17 481 aaPredicted RBP2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 NAA35Q5VZE5 725 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 ATG16L1Q676U5 607 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 WDR93Q6P2C0 686 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 DENND1BQ6P3S1 775 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 TMEM88Q6PEY1 159 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 CLEC4GQ6UXB4 293 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 RSRC2Q7L4I2 434 aaKnown RBP2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 MAATS1Q7Z4T9 603 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 PCGF5Q86SE9 256 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 PDCL2Q8N4E4 241 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 NGEFQ8N5V2 710 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 FAM47BQ8NA70 645 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 PLEKHA2Q9HB19 425 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 ERVK-5Q9HDB9 667 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 TBC1D14Q9P2M4 693 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 RAB21Q9UL25 225 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 TBX20Q9UMR3 447 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 KDM6BO15054 1643 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 SHROOM2Q13796 1616 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 SNAPC4Q5SXM2 1469 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 ITIH6Q6UXX5 1313 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 ABCC2Q92887 1545 aa2.63□□□□□ -1.99
HMGB3P2-201ENST00000411913 ROCK1Q13464 1354 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 PLXNC1O60486 1568 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 FHOD3Q2V2M9 1422 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 KIF14Q15058 1648 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 AGAP5A6NIR3 686 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 B4E171 279 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 KLK10O43240 276 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 REC8O95072 547 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 BAG4O95429 457 aaKnown RBP2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 LDLRP01130 860 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 CD4P01730 458 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 ALDOAP04075 364 aaKnown RBP2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 SNRNP70P08621 437 aaKnown RBP2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 CSF1P09603 554 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 IFIT1P09914 478 aaKnown RBP2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 PEPDP12955 493 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 ARSBP15848 533 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 U2AF2P26368 475 aaKnown RBP eCLIP2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 PSMC2P35998 433 aaKnown RBP2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 PNPLA4P41247 253 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 TSPAN7P41732 249 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 ZNF84P51523 738 aa2.62□□□□□ -1.99
HMGB3P2-201ENST00000411913 GSCP56915 257 aaPredicted RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms