RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 SSU72P8A0A1W2PR75 194 aa19.28■□□□□ 0.68
SF3A1-202ENST00000411423 GOLGA8CPA6NN73 597 aa19.28■□□□□ 0.68
SF3A1-202ENST00000411423 DFNA5O60443 496 aa19.28■□□□□ 0.68
SF3A1-202ENST00000411423 SDC3O75056 442 aa19.28■□□□□ 0.68
SF3A1-202ENST00000411423 DKK1O94907 266 aa19.28■□□□□ 0.68
SF3A1-202ENST00000411423 AKT2P31751 481 aa19.28■□□□□ 0.68
SF3A1-202ENST00000411423 IL10RBQ08334 325 aa19.28■□□□□ 0.68
SF3A1-202ENST00000411423 SUZ12Q15022 739 aaKnown RBP19.28■□□□□ 0.68
SF3A1-202ENST00000411423 TTC7BQ86TV6 843 aa19.28■□□□□ 0.68
SF3A1-202ENST00000411423 CAMK1DQ8IU85 385 aa19.28■□□□□ 0.68
SF3A1-202ENST00000411423 ADAMTS14Q8WXS8 1223 aa19.28■□□□□ 0.68
SF3A1-202ENST00000411423 RAB7BQ96AH8 199 aa19.28■□□□□ 0.68
SF3A1-202ENST00000411423 FEM1CQ96JP0 617 aa19.28■□□□□ 0.68
SF3A1-202ENST00000411423 KLHL11Q9NVR0 708 aa19.28■□□□□ 0.68
SF3A1-202ENST00000411423 CTTNBP2NLQ9P2B4 639 aa19.28■□□□□ 0.68
SF3A1-202ENST00000411423 DKK3Q9UBP4 350 aa19.28■□□□□ 0.68
SF3A1-202ENST00000411423 CHD8Q9HCK8 2581 aa19.28■□□□□ 0.68
SF3A1-202ENST00000411423 TSPAN11A1L157 253 aa19.27■□□□□ 0.68
SF3A1-202ENST00000411423 MYO1FO00160 1098 aa19.27■□□□□ 0.68
SF3A1-202ENST00000411423 TSPAN6O43657 245 aa19.27■□□□□ 0.68
SF3A1-202ENST00000411423 MMP20O60882 483 aa19.27■□□□□ 0.68
SF3A1-202ENST00000411423 PALMO75781 387 aa19.27■□□□□ 0.68
SF3A1-202ENST00000411423 PROSCO94903 275 aa19.27■□□□□ 0.68
SF3A1-202ENST00000411423 PRKCGP05129 697 aa19.27■□□□□ 0.68
SF3A1-202ENST00000411423 ITGAVP06756 1048 aa19.27■□□□□ 0.68
SF3A1-202ENST00000411423 ARL4AP40617 200 aa19.27■□□□□ 0.68
SF3A1-202ENST00000411423 ZNF135P52742 658 aaPredicted RBP19.27■□□□□ 0.68
SF3A1-202ENST00000411423 SEMG2Q02383 582 aa19.27■□□□□ 0.68
SF3A1-202ENST00000411423 SLC10A7Q0GE19 358 aa19.27■□□□□ 0.68
SF3A1-202ENST00000411423 OVGP1Q12889 678 aa19.27■□□□□ 0.68
SF3A1-202ENST00000411423 SRLQ86TD4 932 aa19.27■□□□□ 0.68
SF3A1-202ENST00000411423 PGBD5Q8N414 524 aa19.27■□□□□ 0.68
SF3A1-202ENST00000411423 GATA6Q92908 595 aa19.27■□□□□ 0.68
SF3A1-202ENST00000411423 CALN1Q9BXU9 219 aa19.27■□□□□ 0.68
SF3A1-202ENST00000411423 SUV39H2Q9H5I1 410 aa19.27■□□□□ 0.68
SF3A1-202ENST00000411423 NHEJ1Q9H9Q4 299 aaPredicted RBP19.27■□□□□ 0.68
SF3A1-202ENST00000411423 SP110Q9HB58 689 aa19.27■□□□□ 0.68
SF3A1-202ENST00000411423 DONSONQ9NYP3 566 aa19.27■□□□□ 0.68
SF3A1-202ENST00000411423 COL5A1P20908 1838 aaPredicted RBP19.27■□□□□ 0.68
SF3A1-202ENST00000411423 MAFKO60675 156 aa19.26■□□□□ 0.67
SF3A1-202ENST00000411423 H2AFZP0C0S5 128 aa19.26■□□□□ 0.67
SF3A1-202ENST00000411423 TMEM253P0C7T8 217 aa19.26■□□□□ 0.67
SF3A1-202ENST00000411423 GJC1P36383 396 aa19.26■□□□□ 0.67
SF3A1-202ENST00000411423 CDH6P55285 790 aa19.26■□□□□ 0.67
SF3A1-202ENST00000411423 RAD51Q06609 339 aa19.26■□□□□ 0.67
SF3A1-202ENST00000411423 ZNF542PQ5EBM4 170 aa19.26■□□□□ 0.67
SF3A1-202ENST00000411423 SARM1Q6SZW1 724 aa19.26■□□□□ 0.67
SF3A1-202ENST00000411423 TMCO3Q6UWJ1 677 aa19.26■□□□□ 0.67
SF3A1-202ENST00000411423 Q6ZSR6 202 aa19.26■□□□□ 0.67
SF3A1-202ENST00000411423 H2AFVQ71UI9 128 aa19.26■□□□□ 0.67
SF3A1-202ENST00000411423 MARCH9Q86YJ5 346 aa19.26■□□□□ 0.67
SF3A1-202ENST00000411423 EID2Q8N6I1 236 aa19.26■□□□□ 0.67
SF3A1-202ENST00000411423 LENG8Q96PV6 779 aaPredicted RBP19.26■□□□□ 0.67
SF3A1-202ENST00000411423 CDC6Q99741 560 aa19.26■□□□□ 0.67
SF3A1-202ENST00000411423 WRAP53Q9BUR4 548 aaKnown RBP19.26■□□□□ 0.67
SF3A1-202ENST00000411423 UCKL1Q9NWZ5 548 aa19.26■□□□□ 0.67
SF3A1-202ENST00000411423 UVRAGQ9P2Y5 699 aa19.26■□□□□ 0.67
SF3A1-202ENST00000411423 COQ6Q9Y2Z9 468 aa19.26■□□□□ 0.67
SF3A1-202ENST00000411423 HS3ST3A1Q9Y663 406 aa19.26■□□□□ 0.67
SF3A1-202ENST00000411423 ACACBO00763 2458 aa19.25■□□□□ 0.67
SF3A1-202ENST00000411423 NEMP1O14524 444 aa19.25■□□□□ 0.67
SF3A1-202ENST00000411423 IGFALSP35858 605 aa19.25■□□□□ 0.67
SF3A1-202ENST00000411423 SSR1P43307 286 aaKnown RBP19.25■□□□□ 0.67
SF3A1-202ENST00000411423 CSNK1DP48730 415 aa19.25■□□□□ 0.67
SF3A1-202ENST00000411423 ARRB1P49407 418 aaPredicted RBP19.25■□□□□ 0.67
SF3A1-202ENST00000411423 DNAJC3Q13217 504 aa19.25■□□□□ 0.67
SF3A1-202ENST00000411423 DPYSL3Q14195 570 aa19.25■□□□□ 0.67
SF3A1-202ENST00000411423 KYAT3Q6YP21 454 aaKnown RBP19.25■□□□□ 0.67
SF3A1-202ENST00000411423 PTAR1Q7Z6K3 402 aaPredicted RBP19.25■□□□□ 0.67
SF3A1-202ENST00000411423 SLC25A45Q8N413 288 aa19.25■□□□□ 0.67
SF3A1-202ENST00000411423 LZTR1Q8N653 840 aa19.25■□□□□ 0.67
SF3A1-202ENST00000411423 PCDH19Q8TAB3 1148 aa19.25■□□□□ 0.67
SF3A1-202ENST00000411423 CTNNBL1Q8WYA6 563 aaPredicted RBP19.25■□□□□ 0.67
SF3A1-202ENST00000411423 CENPTQ96BT3 561 aa19.25■□□□□ 0.67
SF3A1-202ENST00000411423 CINPQ9BW66 212 aaPredicted RBP19.25■□□□□ 0.67
SF3A1-202ENST00000411423 DEF6Q9H4E7 631 aa19.25■□□□□ 0.67
SF3A1-202ENST00000411423 PCDH12Q9NPG4 1184 aa19.25■□□□□ 0.67
SF3A1-202ENST00000411423 MBNL1Q9NR56 388 aaKnown RBP19.25■□□□□ 0.67
SF3A1-202ENST00000411423 PNMA8BQ9ULN7 279 aaPredicted RBP19.25■□□□□ 0.67
SF3A1-202ENST00000411423 NEUROG3Q9Y4Z2 214 aa19.25■□□□□ 0.67
SF3A1-202ENST00000411423 LRRK1Q38SD2 2015 aa19.25■□□□□ 0.67
SF3A1-202ENST00000411423 PLXNB3Q9ULL4 1909 aa19.25■□□□□ 0.67
SF3A1-202ENST00000411423 ANKRD36A6QL64 1941 aa19.24■□□□□ 0.67
SF3A1-202ENST00000411423 FAM221BA6H8Z2 402 aa19.24■□□□□ 0.67
SF3A1-202ENST00000411423 A6NNZ2 444 aa19.24■□□□□ 0.67
SF3A1-202ENST00000411423 TMEM110-MUSTN1A8MSY1 372 aa19.24■□□□□ 0.67
SF3A1-202ENST00000411423 TNFSF14O43557 240 aa19.24■□□□□ 0.67
SF3A1-202ENST00000411423 MFSD11O43934 449 aa19.24■□□□□ 0.67
SF3A1-202ENST00000411423 AKR1B10O60218 316 aa19.24■□□□□ 0.67
SF3A1-202ENST00000411423 MAGEC1O60732 1142 aa19.24■□□□□ 0.67
SF3A1-202ENST00000411423 TRIM16O95361 564 aa19.24■□□□□ 0.67
SF3A1-202ENST00000411423 GIMD1P0DJR0 217 aa19.24■□□□□ 0.67
SF3A1-202ENST00000411423 FZD2Q14332 565 aa19.24■□□□□ 0.67
SF3A1-202ENST00000411423 KRT81Q14533 505 aa19.24■□□□□ 0.67
SF3A1-202ENST00000411423 RFTN1Q14699 578 aaPredicted RBP19.24■□□□□ 0.67
SF3A1-202ENST00000411423 LBRQ14739 615 aaKnown RBP19.24■□□□□ 0.67
SF3A1-202ENST00000411423 UGP2Q16851 508 aa19.24■□□□□ 0.67
SF3A1-202ENST00000411423 TMEM52BQ4KMG9 183 aa19.24■□□□□ 0.67
SF3A1-202ENST00000411423 NCBP2-AS2Q69YL0 99 aa19.24■□□□□ 0.67
SF3A1-202ENST00000411423 OXR1Q8N573 874 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms