RNA–Protein interactions for RNA: ENST00000409050.1

SCN1A-203, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 5,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-203ENST00000409050 NOL6Q9H6R4 1146 aaKnown RBP6.15□□□□□ -1.43
SCN1A-203ENST00000409050 NECTIN3Q9NQS3 549 aa6.15□□□□□ -1.43
SCN1A-203ENST00000409050 SETD4Q9NVD3 440 aa6.15□□□□□ -1.43
SCN1A-203ENST00000409050 SPG21Q9NZD8 308 aa6.15□□□□□ -1.43
SCN1A-203ENST00000409050 ZMYM5Q9UJ78 669 aa6.15□□□□□ -1.43
SCN1A-203ENST00000409050 A0A0X1KG70 313 aa6.15□□□□□ -1.43
SCN1A-203ENST00000409050 WDR27A2RRH5 827 aa6.15□□□□□ -1.43
SCN1A-203ENST00000409050 FAM86C2PA6NEL3 165 aa6.15□□□□□ -1.43
SCN1A-203ENST00000409050 PROCP04070 461 aa6.15□□□□□ -1.43
SCN1A-203ENST00000409050 CKMP06732 381 aa6.15□□□□□ -1.43
SCN1A-203ENST00000409050 FAM163BP0C2L3 166 aa6.15□□□□□ -1.43
SCN1A-203ENST00000409050 DRD4P21917 467 aa6.15□□□□□ -1.43
SCN1A-203ENST00000409050 TIE1P35590 1138 aa6.15□□□□□ -1.43
SCN1A-203ENST00000409050 FLT3P36888 993 aa6.15□□□□□ -1.43
SCN1A-203ENST00000409050 ACADVLP49748 655 aa6.15□□□□□ -1.43
SCN1A-203ENST00000409050 TUBP50607 506 aa6.15□□□□□ -1.43
SCN1A-203ENST00000409050 HADHBP55084 474 aaKnown RBP6.15□□□□□ -1.43
SCN1A-203ENST00000409050 KCNT2Q6UVM3 1135 aa6.15□□□□□ -1.43
SCN1A-203ENST00000409050 CHPFQ8IZ52 775 aa6.15□□□□□ -1.43
SCN1A-203ENST00000409050 GLB1L3Q8NCI6 653 aaPredicted RBP6.15□□□□□ -1.43
SCN1A-203ENST00000409050 REPS2Q8NFH8 660 aa6.15□□□□□ -1.43
SCN1A-203ENST00000409050 RNASE11Q8TAA1 199 aaKnown RBP6.15□□□□□ -1.43
SCN1A-203ENST00000409050 IPCEF1Q8WWN9 437 aaPredicted RBP6.15□□□□□ -1.43
SCN1A-203ENST00000409050 TOP1MTQ969P6 601 aa6.15□□□□□ -1.43
SCN1A-203ENST00000409050 TMCO6Q96DC7 493 aa6.15□□□□□ -1.43
SCN1A-203ENST00000409050 ROGDIQ9GZN7 287 aa6.15□□□□□ -1.43
SCN1A-203ENST00000409050 ABHD16BQ9H3Z7 469 aa6.15□□□□□ -1.43
SCN1A-203ENST00000409050 NOL11Q9H8H0 719 aaKnown RBP6.15□□□□□ -1.43
SCN1A-203ENST00000409050 SPON1Q9HCB6 807 aa6.15□□□□□ -1.43
SCN1A-203ENST00000409050 CD320Q9NPF0 282 aa6.15□□□□□ -1.43
SCN1A-203ENST00000409050 SNTG2Q9NY99 539 aa6.15□□□□□ -1.43
SCN1A-203ENST00000409050 FNIP2Q9P278 1114 aa6.15□□□□□ -1.43
SCN1A-203ENST00000409050 MGAT4AQ9UM21 535 aa6.15□□□□□ -1.43
SCN1A-203ENST00000409050 MANSC4A6NHS7 340 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-203ENST00000409050 BTN3A1O00481 513 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 AVILO75366 819 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 GATBO75879 557 aaKnown RBP6.14□□□□□ -1.43
SCN1A-203ENST00000409050 CALCAP01258 141 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 ASLP04424 464 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 PLEKP08567 350 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-203ENST00000409050 GSTT2BP0CG30 244 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 IRF1P10914 325 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 ACADMP11310 421 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 YBX3P16989 372 aaKnown RBP eCLIP6.14□□□□□ -1.43
SCN1A-203ENST00000409050 CRHR1P34998 444 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 PKNOX1P55347 436 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 ATP1A4Q13733 1029 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 HERC3Q15034 1050 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 SLC47A2Q86VL8 602 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 FAM131BQ86XD5 332 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 TOP6BLQ8N6T0 577 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 SELENOMQ8WWX9 145 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 SHC3Q92529 594 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 RNF157Q96PX1 679 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 CDH19Q9H159 772 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 RHOJQ9H4E5 214 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 ZDHHC4Q9NPG8 344 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 ADARB2Q9NS39 739 aaKnown RBP6.14□□□□□ -1.43
SCN1A-203ENST00000409050 MTRRQ9UBK8 725 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 LGALS13Q9UHV8 139 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 GIT1Q9Y2X7 761 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 SPATA31A1Q5TZJ5 1347 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 DCXO43602 365 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 CKBP12277 381 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 PRG2P13727 222 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 MIPP30301 263 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 STARP49675 285 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 SLC18A1P54219 525 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 USP46P62068 366 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 EFEMP1Q12805 493 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 PGM5Q15124 567 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 NEDD8Q15843 81 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 IL27RAQ6UWB1 636 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 OTOP1Q7RTM1 612 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 PLPPR4Q7Z2D5 763 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 AKAP14Q86UN6 197 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 RBFAQ8N0V3 343 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 PQLC1Q8N2U9 271 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 HJURPQ8NCD3 748 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-203ENST00000409050 KIAA0895Q8NCT3 520 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 PJA1Q8NG27 643 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 PHF10Q8WUB8 498 aaKnown RBP6.14□□□□□ -1.43
SCN1A-203ENST00000409050 RFKQ969G6 155 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 SPATA17Q96L03 361 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 SEPHS2Q99611 448 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 DUSP9Q99956 384 aaKnown RBP6.14□□□□□ -1.43
SCN1A-203ENST00000409050 GORASP1Q9BQQ3 440 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 PORCNQ9H237 461 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 KCNN2Q9H2S1 579 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 ATP13A3Q9H7F0 1226 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 CYP4F12Q9HCS2 524 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 AXIN2Q9Y2T1 843 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 TRIM43BA6NCK2 446 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 AZIN1O14977 448 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 ITGA10O75578 1167 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 OR1E1P30953 314 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 CDH5P33151 784 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-203ENST00000409050 PTDSS1P48651 473 aaKnown RBP6.14□□□□□ -1.43
SCN1A-203ENST00000409050 NDST1P52848 882 aa6.14□□□□□ -1.43
SCN1A-203ENST00000409050 TAF13Q15543 124 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms