RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 LRRC43Q8N309 656 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 ZBTB8BQ8NAP8 495 aaPredicted RBP14.95□□□□□ -0.02
COL9A2-202ENST00000372748 TXNDC5Q8NBS9 432 aaKnown RBP14.95□□□□□ -0.02
COL9A2-202ENST00000372748 PPTC7Q8NI37 304 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 RDH11Q8TC12 318 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 MCMBPQ9BTE3 642 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 OSBPL2Q9H1P3 480 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 POMKQ9H5K3 350 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 ACOT9Q9Y305 439 aa14.95□□□□□ -0.02
COL9A2-202ENST00000372748 H0YJX3 145 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 M0QYT0 321 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 HSPA1AP0DMV8 641 aaKnown RBP14.94□□□□□ -0.02
COL9A2-202ENST00000372748 HSPA1BP0DMV9 641 aaKnown RBP14.94□□□□□ -0.02
COL9A2-202ENST00000372748 NFKB1P19838 968 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 MATKP42679 507 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 SLC7A2P52569 658 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 MAPK10P53779 464 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 SNX16P57768 344 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 TUBA4AP68366 448 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 ZBTB17Q13105 803 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 STX5Q13190 355 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 C9orf57Q5W0N0 161 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 DHRS4L2Q6PKH6 230 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 RNF135Q8IUD6 432 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 MFSD6LQ8IWD5 586 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 ANKRD52Q8NB46 1076 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 BEST2Q8NFU1 509 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 SPPL2BQ8TCT7 592 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 TFAP2CQ92754 450 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 THAP11Q96EK4 314 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 SNX27Q96L92 541 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 UTP6Q9NYH9 597 aaKnown RBP14.94□□□□□ -0.02
COL9A2-202ENST00000372748 IPO11Q9UI26 975 aaKnown RBP14.94□□□□□ -0.02
COL9A2-202ENST00000372748 A0A1W2PPW3 197 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 TCRBV3S1A0A5B6 114 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 GIPC1O14908 333 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 RECQL4O94761 1208 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 BMP10O95393 424 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 ERCC2P18074 760 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 ADIGQ0VDE8 80 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 GPR107Q5VW38 600 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 SYPL2Q5VXT5 272 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 STRADAQ7RTN6 431 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 PELI3Q8N2H9 469 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 HM13Q8TCT9 377 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 PPP1R14BQ96C90 147 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 RHOJQ9H4E5 214 aa14.94□□□□□ -0.02
COL9A2-202ENST00000372748 ZNF638Q14966 1978 aaKnown RBP14.94□□□□□ -0.02
COL9A2-202ENST00000372748 TRPC5OSA6NMA1 111 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 CLDN5O00501 218 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 MRASO14807 208 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 UBDO15205 165 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 CD247P20963 164 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 TKTP29401 623 aaKnown RBP14.93□□□□□ -0.02
COL9A2-202ENST00000372748 BCAT1P54687 386 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 NME5P56597 212 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 SLC25A52Q3SY17 297 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 OTUD1Q5VV17 481 aaPredicted RBP14.93□□□□□ -0.02
COL9A2-202ENST00000372748 CHST15Q7LFX5 561 aaPredicted RBP14.93□□□□□ -0.02
COL9A2-202ENST00000372748 DHFR2Q86XF0 187 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 RNF168Q8IYW5 571 aaPredicted RBP14.93□□□□□ -0.02
COL9A2-202ENST00000372748 NPWQ8N729 165 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 PBXIP1Q96AQ6 731 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 LRCH3Q96II8 777 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 MAELQ96JY0 434 aaKnown RBP14.93□□□□□ -0.02
COL9A2-202ENST00000372748 NAA50Q9GZZ1 169 aaKnown RBP14.93□□□□□ -0.02
COL9A2-202ENST00000372748 CXorf21Q9HAI6 301 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 PFDN4Q9NQP4 134 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 ADARB2Q9NS39 739 aaKnown RBP14.93□□□□□ -0.02
COL9A2-202ENST00000372748 NCKIPSDQ9NZQ3 722 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 DNAH12Q6ZR08 3092 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 TSPAN8P19075 237 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 CYP2B6P20813 491 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 ATP6V1B2P21281 511 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 YWHAQP27348 245 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 SOX11P35716 441 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 CD97P48960 835 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 NDUFV1P49821 464 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 HK2P52789 917 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 GJA9P57773 515 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 ZBED5Q49AG3 693 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 FGD3Q5JSP0 725 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 OGFOD2Q6N063 350 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 OFCC1Q8IZS5 231 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 PNPLA1Q8N8W4 532 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 RNF169Q8NCN4 708 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 EFHD1Q9BUP0 239 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 MUC3BQ9H195 1237 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 RNF39Q9H2S5 420 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 FBRSL1Q9HCM7 1045 aaKnown RBP14.93□□□□□ -0.02
COL9A2-202ENST00000372748 PIGVQ9NUD9 493 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 KCNH4Q9UQ05 1017 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 ANKRD6Q9Y2G4 727 aa14.93□□□□□ -0.02
COL9A2-202ENST00000372748 A0A087WXM4 84 aa14.92□□□□□ -0.02
COL9A2-202ENST00000372748 C9JVG2 144 aa14.92□□□□□ -0.02
COL9A2-202ENST00000372748 XPOTO43592 962 aaKnown RBP14.92□□□□□ -0.02
COL9A2-202ENST00000372748 GPC4O75487 556 aa14.92□□□□□ -0.02
COL9A2-202ENST00000372748 KCNA5P22460 613 aa14.92□□□□□ -0.02
COL9A2-202ENST00000372748 ZBTB6Q15916 424 aa14.92□□□□□ -0.02
COL9A2-202ENST00000372748 FBXO47Q5MNV8 452 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms