RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 DYRK4Q9NR20 520 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 USP36Q9P275 1121 aaKnown RBP16.49■□□□□ 0.23
TMEM53-203ENST00000372242 RSPH14Q9UHP6 348 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 DRG1Q9Y295 367 aaKnown RBP16.49■□□□□ 0.23
TMEM53-203ENST00000372242 C16orf96A6NNT2 1141 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 TRAFD1O14545 582 aaPredicted RBP16.49■□□□□ 0.23
TMEM53-203ENST00000372242 SERPINF2P08697 491 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 ITGB7P26010 798 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 P2RY2P41231 377 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 SKOR1P84550 965 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 TRAF2Q12933 501 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 GRM3Q14832 879 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 RALGPS1Q5JS13 557 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 CCDC137Q6PK04 289 aaKnown RBP16.49■□□□□ 0.23
TMEM53-203ENST00000372242 PARS2Q7L3T8 475 aaKnown RBP16.49■□□□□ 0.23
TMEM53-203ENST00000372242 GSTA5Q7RTV2 222 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 WDR5BQ86VZ2 330 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 LONP2Q86WA8 852 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 ZSWIM9Q86XI8 627 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 C12orf50Q8NA57 414 aaPredicted RBP16.49■□□□□ 0.23
TMEM53-203ENST00000372242 RTP4Q96DX8 246 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 PPP1R16AQ96I34 528 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 RNF14Q9UBS8 474 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 SCML1Q9UN30 329 aa16.49■□□□□ 0.23
TMEM53-203ENST00000372242 CCDC163A0A0D9SF12 145 aa16.48■□□□□ 0.23
TMEM53-203ENST00000372242 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.48■□□□□ 0.23
TMEM53-203ENST00000372242 OPHN1O60890 802 aa16.48■□□□□ 0.23
TMEM53-203ENST00000372242 PHF2O75151 1096 aa16.48■□□□□ 0.23
TMEM53-203ENST00000372242 GCATO75600 419 aa16.48■□□□□ 0.23
TMEM53-203ENST00000372242 ZSCAN5DPP0CG00 497 aa16.48■□□□□ 0.23
TMEM53-203ENST00000372242 CES1P23141 567 aa16.48■□□□□ 0.23
TMEM53-203ENST00000372242 PSMB4P28070 264 aa16.48■□□□□ 0.23
TMEM53-203ENST00000372242 COILP38432 576 aaPredicted RBP16.48■□□□□ 0.23
TMEM53-203ENST00000372242 MAP7D1Q3KQU3 841 aa16.48■□□□□ 0.23
TMEM53-203ENST00000372242 ZNF528Q3MIS6 628 aa16.48■□□□□ 0.23
TMEM53-203ENST00000372242 USP39Q53GS9 565 aaKnown RBP16.48■□□□□ 0.23
TMEM53-203ENST00000372242 ARHGEF18Q6ZSZ5 1173 aa16.48■□□□□ 0.23
TMEM53-203ENST00000372242 KDELC2Q7Z4H8 507 aa16.48■□□□□ 0.23
TMEM53-203ENST00000372242 PAF1Q8N7H5 531 aa16.48■□□□□ 0.23
TMEM53-203ENST00000372242 KIF18AQ8NI77 898 aa16.48■□□□□ 0.23
TMEM53-203ENST00000372242 NELL1Q92832 810 aa16.48■□□□□ 0.23
TMEM53-203ENST00000372242 ZNF641Q96N77 438 aaPredicted RBP16.48■□□□□ 0.23
TMEM53-203ENST00000372242 GORASP1Q9BQQ3 440 aa16.48■□□□□ 0.23
TMEM53-203ENST00000372242 DDX47Q9H0S4 455 aaKnown RBP16.48■□□□□ 0.23
TMEM53-203ENST00000372242 GBA3Q9H227 469 aa16.48■□□□□ 0.23
TMEM53-203ENST00000372242 PCDHB9Q9Y5E1 797 aa16.48■□□□□ 0.23
TMEM53-203ENST00000372242 RAI2Q9Y5P3 530 aa16.48■□□□□ 0.23
TMEM53-203ENST00000372242 ZNF217O75362 1048 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 PMPCBO75439 489 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 PDHA1P08559 390 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 ACSL1P33121 698 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 PCSK7Q16549 785 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 CFAP58Q5T655 872 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 PIP5KL1Q5T9C9 394 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 AGBL4Q5VU57 503 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 FBXL19Q6PCT2 694 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 USP30Q70CQ3 517 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 ERN2Q76MJ5 926 aaKnown RBP16.47■□□□□ 0.23
TMEM53-203ENST00000372242 CCDC89Q8N998 374 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 PRSS33Q8NF86 280 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 ATL2Q8NHH9 583 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 OXNAD1Q96HP4 312 aaPredicted RBP16.47■□□□□ 0.23
TMEM53-203ENST00000372242 FCRL5Q96RD9 977 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 FAM126AQ9BYI3 521 aaPredicted RBP16.47■□□□□ 0.23
TMEM53-203ENST00000372242 ZSCAN32Q9NX65 697 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 CDC23Q9UJX2 597 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 CHKBQ9Y259 395 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 NCKAP1Q9Y2A7 1128 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 IGHV1OR15-9A0A0B4J2B8 117 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 HTRA2O43464 458 aaPredicted RBP16.47■□□□□ 0.23
TMEM53-203ENST00000372242 ZNF189O75820 626 aaPredicted RBP16.47■□□□□ 0.23
TMEM53-203ENST00000372242 METTL18O95568 372 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 PRKCGP05129 697 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 ITIH2P19823 946 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 TCF15Q12870 199 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 TRIP13Q15645 432 aaPredicted RBP16.47■□□□□ 0.23
TMEM53-203ENST00000372242 FAXCQ5TGI0 409 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 ITPRIPL1Q6GPH6 555 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 TTC7BQ86TV6 843 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 KBTBD6Q86V97 674 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 KLHL7Q8IXQ5 586 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 OR14C36Q8NHC7 312 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 TADA1Q96BN2 335 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 ECHDC3Q96DC8 303 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 TOE1Q96GM8 510 aaKnown RBP16.47■□□□□ 0.23
TMEM53-203ENST00000372242 HDAC8Q9BY41 377 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 MBD1Q9UIS9 605 aaPredicted RBP16.47■□□□□ 0.23
TMEM53-203ENST00000372242 NUMA1Q14980 2115 aa16.47■□□□□ 0.23
TMEM53-203ENST00000372242 VPS13AQ96RL7 3174 aa16.46■□□□□ 0.23
TMEM53-203ENST00000372242 FAM47DPA6NHR8 397 aa16.46■□□□□ 0.23
TMEM53-203ENST00000372242 HRO43593 1189 aa16.46■□□□□ 0.23
TMEM53-203ENST00000372242 SOCS5O75159 536 aa16.46■□□□□ 0.23
TMEM53-203ENST00000372242 IGLV3-19P01714 112 aa16.46■□□□□ 0.23
TMEM53-203ENST00000372242 ADRB3P13945 408 aa16.46■□□□□ 0.23
TMEM53-203ENST00000372242 TIMP2P16035 220 aa16.46■□□□□ 0.23
TMEM53-203ENST00000372242 BCKDHBP21953 392 aa16.46■□□□□ 0.23
TMEM53-203ENST00000372242 NEK3P51956 506 aa16.46■□□□□ 0.23
TMEM53-203ENST00000372242 TAS2R38P59533 333 aa16.46■□□□□ 0.23
TMEM53-203ENST00000372242 P3H1Q32P28 736 aa16.46■□□□□ 0.23
TMEM53-203ENST00000372242 SYCP2LQ5T4T6 812 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms