RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 ATP11CQ8NB49 1132 aa15.37■□□□□ 0.05
RPF1-202ENST00000370656 TMIEQ8NEW7 156 aa15.37■□□□□ 0.05
RPF1-202ENST00000370656 TPCN2Q8NHX9 752 aa15.37■□□□□ 0.05
RPF1-202ENST00000370656 TTC9Q92623 222 aa15.37■□□□□ 0.05
RPF1-202ENST00000370656 ALG14Q96F25 216 aa15.37■□□□□ 0.05
RPF1-202ENST00000370656 TRIM11Q96F44 468 aa15.37■□□□□ 0.05
RPF1-202ENST00000370656 PPP1R16AQ96I34 528 aa15.37■□□□□ 0.05
RPF1-202ENST00000370656 NAPGQ99747 312 aaPredicted RBP15.37■□□□□ 0.05
RPF1-202ENST00000370656 C2orf49Q9BVC5 232 aaPredicted RBP15.37■□□□□ 0.05
RPF1-202ENST00000370656 MUC3BQ9H195 1237 aa15.37■□□□□ 0.05
RPF1-202ENST00000370656 FZD3Q9NPG1 666 aa15.37■□□□□ 0.05
RPF1-202ENST00000370656 DDIT4Q9NX09 232 aa15.37■□□□□ 0.05
RPF1-202ENST00000370656 SATB2Q9UPW6 733 aa15.37■□□□□ 0.05
RPF1-202ENST00000370656 HS3ST2Q9Y278 367 aa15.37■□□□□ 0.05
RPF1-202ENST00000370656 CAPN6Q9Y6Q1 641 aa15.37■□□□□ 0.05
RPF1-202ENST00000370656 SYNJ2BP-COX16A0A087WUM0 186 aa15.36■□□□□ 0.05
RPF1-202ENST00000370656 MACROD2A1Z1Q3 448 aa15.36■□□□□ 0.05
RPF1-202ENST00000370656 MMP8P22894 467 aa15.36■□□□□ 0.05
RPF1-202ENST00000370656 AUHQ13825 339 aaKnown RBP15.36■□□□□ 0.05
RPF1-202ENST00000370656 Q6ZSR6 202 aa15.36■□□□□ 0.05
RPF1-202ENST00000370656 ERN2Q76MJ5 926 aaKnown RBP15.36■□□□□ 0.05
RPF1-202ENST00000370656 ABI3BPQ7Z7G0 1075 aa15.36■□□□□ 0.05
RPF1-202ENST00000370656 TMEM110Q86TL2 294 aa15.36■□□□□ 0.05
RPF1-202ENST00000370656 TMEM35BQ8NCS4 154 aa15.36■□□□□ 0.05
RPF1-202ENST00000370656 SLC35G2Q8TBE7 412 aa15.36■□□□□ 0.05
RPF1-202ENST00000370656 ARHGEF26Q96DR7 871 aa15.36■□□□□ 0.05
RPF1-202ENST00000370656 SLC46A1Q96NT5 459 aa15.36■□□□□ 0.05
RPF1-202ENST00000370656 ALS2CR12Q96Q35 445 aa15.36■□□□□ 0.05
RPF1-202ENST00000370656 SEMA4CQ9C0C4 833 aa15.36■□□□□ 0.05
RPF1-202ENST00000370656 THAP2Q9H0W7 228 aa15.36■□□□□ 0.05
RPF1-202ENST00000370656 COX16Q9P0S2 106 aa15.36■□□□□ 0.05
RPF1-202ENST00000370656 UVRAGQ9P2Y5 699 aa15.36■□□□□ 0.05
RPF1-202ENST00000370656 VANGL2Q9ULK5 521 aa15.36■□□□□ 0.05
RPF1-202ENST00000370656 HS3ST3A1Q9Y663 406 aa15.36■□□□□ 0.05
RPF1-202ENST00000370656 CSNK1G3Q9Y6M4 447 aa15.36■□□□□ 0.05
RPF1-202ENST00000370656 BOD1L1Q8NFC6 3051 aa15.35■□□□□ 0.05
RPF1-202ENST00000370656 GRID2IPA4D2P6 1211 aa15.35■□□□□ 0.05
RPF1-202ENST00000370656 K7ENP7 123 aa15.35■□□□□ 0.05
RPF1-202ENST00000370656 SLC28A2O43868 658 aa15.35■□□□□ 0.05
RPF1-202ENST00000370656 GLI1P08151 1106 aa15.35■□□□□ 0.05
RPF1-202ENST00000370656 SRCP12931 536 aa15.35■□□□□ 0.05
RPF1-202ENST00000370656 MYF5P13349 255 aa15.35■□□□□ 0.05
RPF1-202ENST00000370656 RECQLP46063 649 aaPredicted RBP15.35■□□□□ 0.05
RPF1-202ENST00000370656 CDH4P55283 916 aa15.35■□□□□ 0.05
RPF1-202ENST00000370656 GSCP56915 257 aaPredicted RBP15.35■□□□□ 0.05
RPF1-202ENST00000370656 CLDN2P57739 230 aa15.35■□□□□ 0.05
RPF1-202ENST00000370656 RPS21P63220 83 aaKnown RBP15.35■□□□□ 0.05
RPF1-202ENST00000370656 EIF4EBP2Q13542 120 aaPredicted RBP15.35■□□□□ 0.05
RPF1-202ENST00000370656 ZNF542PQ5EBM4 170 aa15.35■□□□□ 0.05
RPF1-202ENST00000370656 DENND1BQ6P3S1 775 aa15.35■□□□□ 0.05
RPF1-202ENST00000370656 INO80CQ6PI98 192 aaPredicted RBP15.35■□□□□ 0.05
RPF1-202ENST00000370656 CCDC81Q6ZN84 652 aa15.35■□□□□ 0.05
RPF1-202ENST00000370656 GCNT7Q6ZNI0 430 aa15.35■□□□□ 0.05
RPF1-202ENST00000370656 RBM44Q6ZP01 1051 aaKnown RBP15.35■□□□□ 0.05
RPF1-202ENST00000370656 DNAAF5Q86Y56 855 aa15.35■□□□□ 0.05
RPF1-202ENST00000370656 SLC22A18ASQ8N1D0 253 aa15.35■□□□□ 0.05
RPF1-202ENST00000370656 ARL14Q8N4G2 192 aa15.35■□□□□ 0.05
RPF1-202ENST00000370656 HDAC8Q9BY41 377 aa15.35■□□□□ 0.05
RPF1-202ENST00000370656 SEPT11Q9NVA2 429 aaKnown RBP15.35■□□□□ 0.05
RPF1-202ENST00000370656 IPO11Q9UI26 975 aaKnown RBP15.35■□□□□ 0.05
RPF1-202ENST00000370656 TBC1D30Q9Y2I9 924 aa15.35■□□□□ 0.05
RPF1-202ENST00000370656 PCDHGA8Q9Y5G5 932 aa15.35■□□□□ 0.05
RPF1-202ENST00000370656 OR51B4Q9Y5P0 310 aa15.35■□□□□ 0.05
RPF1-202ENST00000370656 RP1P56715 2156 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 LY6G6EA0A0G2JKS1 128 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 TCRBV5S1A1TA0A578 114 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 CPED1A4D0V7 1026 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 TMCO5BA8MYB1 307 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 TCEA3O75764 348 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 NEBLO76041 1014 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 CSF2P04141 144 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 CTSLP07711 333 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 RHOCP08134 193 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 NME1P15531 152 aaKnown RBP15.34■□□□□ 0.05
RPF1-202ENST00000370656 TGM2P21980 687 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 MLLT3P42568 568 aaPredicted RBP15.34■□□□□ 0.05
RPF1-202ENST00000370656 NSFP46459 744 aaKnown RBP15.34■□□□□ 0.05
RPF1-202ENST00000370656 GABRB2P47870 512 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 PITX1P78337 314 aaPredicted RBP15.34■□□□□ 0.05
RPF1-202ENST00000370656 CDKN3Q16667 212 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 TMEM259Q4ZIN3 620 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 EFHC1Q5JVL4 640 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 MEI1Q5TIA1 1274 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 NAA35Q5VZE5 725 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 PLEKHA7Q6IQ23 1121 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 KIAA1161Q6NSJ0 714 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 KYAT3Q6YP21 454 aaKnown RBP15.34■□□□□ 0.05
RPF1-202ENST00000370656 PARGQ86W56 976 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 DEFB106AQ8N104 65 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 ZNF548Q8NEK5 533 aaPredicted RBP15.34■□□□□ 0.05
RPF1-202ENST00000370656 OR2A12Q8NGT7 310 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 ZNF592Q92610 1267 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 GLMNQ92990 594 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 ARRDC3Q96B67 414 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 ATXN7L3BQ96GX2 97 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 FEM1CQ96JP0 617 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 SLC17A9Q9BYT1 436 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 ASNSD1Q9NWL6 643 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 IL36AQ9UHA7 158 aa15.34■□□□□ 0.05
RPF1-202ENST00000370656 CDC23Q9UJX2 597 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms