RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 LBHD1Q9BQE6 289 aaPredicted RBP22.47■■□□□ 1.19
NKX2-1-201ENST00000354822 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.47■■□□□ 1.19
NKX2-1-201ENST00000354822 NT5MQ9NPB1 228 aa22.47■■□□□ 1.19
NKX2-1-201ENST00000354822 CDYLQ9Y232 598 aa22.47■■□□□ 1.19
NKX2-1-201ENST00000354822 FAM92AA1XBS5 289 aa22.46■■□□□ 1.19
NKX2-1-201ENST00000354822 ATP5F1P24539 256 aaPredicted RBP22.46■■□□□ 1.19
NKX2-1-201ENST00000354822 HOXD10P28358 340 aa22.46■■□□□ 1.19
NKX2-1-201ENST00000354822 CHRNA4P43681 627 aa22.46■■□□□ 1.19
NKX2-1-201ENST00000354822 CLCN5P51795 746 aa22.46■■□□□ 1.19
NKX2-1-201ENST00000354822 ITKQ08881 620 aa22.46■■□□□ 1.19
NKX2-1-201ENST00000354822 TRIP4Q15650 581 aaPredicted RBP22.46■■□□□ 1.19
NKX2-1-201ENST00000354822 TEX26Q8N6G2 289 aa22.46■■□□□ 1.19
NKX2-1-201ENST00000354822 OMDQ99983 421 aa22.46■■□□□ 1.19
NKX2-1-201ENST00000354822 SP110Q9HB58 689 aa22.46■■□□□ 1.19
NKX2-1-201ENST00000354822 GMIPQ9P107 970 aa22.46■■□□□ 1.19
NKX2-1-201ENST00000354822 MYO16Q9Y6X6 1858 aa22.46■■□□□ 1.19
NKX2-1-201ENST00000354822 RTN3O95197 1032 aaPredicted RBP22.46■■□□□ 1.19
NKX2-1-201ENST00000354822 TBL3Q12788 808 aaKnown RBP22.46■■□□□ 1.19
NKX2-1-201ENST00000354822 VARS2Q5ST30 1063 aaKnown RBP22.46■■□□□ 1.19
NKX2-1-201ENST00000354822 AGAP9Q5VTM2 703 aa22.46■■□□□ 1.19
NKX2-1-201ENST00000354822 SDHAF4Q5VUM1 108 aa22.46■■□□□ 1.19
NKX2-1-201ENST00000354822 REM2Q8IYK8 340 aaPredicted RBP22.46■■□□□ 1.19
NKX2-1-201ENST00000354822 LSMEM2Q8N112 164 aa22.46■■□□□ 1.19
NKX2-1-201ENST00000354822 SLC25A41Q8N5S1 370 aa22.46■■□□□ 1.19
NKX2-1-201ENST00000354822 TTC1Q99614 292 aa22.46■■□□□ 1.19
NKX2-1-201ENST00000354822 SHCBP1LQ9BZQ2 653 aa22.46■■□□□ 1.19
NKX2-1-201ENST00000354822 WDR55Q9H6Y2 383 aaPredicted RBP22.46■■□□□ 1.19
NKX2-1-201ENST00000354822 A6NHS1 94 aa22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 BAG2O95816 211 aa22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 YWHAQP27348 245 aa22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 EPHB1P54762 984 aa22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 EFEMP1Q12805 493 aa22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 DLG1Q12959 904 aa22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 MTA1Q13330 715 aa22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 ZNF460Q14592 562 aa22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 TFAP2DQ7Z6R9 452 aa22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 HEXDCQ8WVB3 486 aa22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 CYP4F11Q9HBI6 524 aa22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 MRGBPQ9NV56 204 aa22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 GOLGA8QA0A0J9YX86 632 aa22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 GOLGA8OA6NCC3 632 aa22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 OR6C75A6NL08 312 aa22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 TRPC5OSA6NMA1 111 aa22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 GOLGA8NF8WBI6 632 aa22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 J3KR12 359 aa22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 COL6A1P12109 1028 aa22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 PIK3R1P27986 724 aa22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 CDC25CP30307 473 aa22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 GRK4P32298 578 aa22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 PPARGP37231 505 aaPredicted RBP22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 CD86P42081 329 aa22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 GPR15P49685 360 aa22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 MTTPP55157 894 aa22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 SLC10A7Q0GE19 358 aa22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 KLC3Q6P597 504 aa22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 C16orf89Q6UX73 402 aa22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 APLFQ8IW19 511 aaPredicted RBP22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 NUF2Q9BZD4 464 aa22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 PRPF19Q9UMS4 504 aaKnown RBP22.45■■□□□ 1.18
NKX2-1-201ENST00000354822 PLXNA3P51805 1871 aa22.44■■□□□ 1.18
NKX2-1-201ENST00000354822 TTC3P53804 2025 aa22.44■■□□□ 1.18
NKX2-1-201ENST00000354822 DRGXA6NNA5 263 aa22.44■■□□□ 1.18
NKX2-1-201ENST00000354822 SLC7A4O43246 635 aa22.44■■□□□ 1.18
NKX2-1-201ENST00000354822 EPHA3P29320 983 aa22.44■■□□□ 1.18
NKX2-1-201ENST00000354822 PGGT1BP53609 377 aa22.44■■□□□ 1.18
NKX2-1-201ENST00000354822 USP46P62068 366 aa22.44■■□□□ 1.18
NKX2-1-201ENST00000354822 CTXN3Q4LDR2 81 aa22.44■■□□□ 1.18
NKX2-1-201ENST00000354822 CNSTQ6PJW8 725 aa22.44■■□□□ 1.18
NKX2-1-201ENST00000354822 PABPC5Q96DU9 382 aaKnown RBP22.44■■□□□ 1.18
NKX2-1-201ENST00000354822 GLT1D1Q96MS3 346 aa22.44■■□□□ 1.18
NKX2-1-201ENST00000354822 SERPINI1Q99574 410 aa22.44■■□□□ 1.18
NKX2-1-201ENST00000354822 TLR8Q9NR97 1041 aaKnown RBP22.44■■□□□ 1.18
NKX2-1-201ENST00000354822 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.44■■□□□ 1.18
NKX2-1-201ENST00000354822 POMPQ9Y244 141 aa22.44■■□□□ 1.18
NKX2-1-201ENST00000354822 PRG3Q9Y2Y8 225 aaPredicted RBP22.44■■□□□ 1.18
NKX2-1-201ENST00000354822 FRMPD3Q5JV73 1810 aa22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 MOXD2PA6NHM9 499 aa22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 PDHA1P08559 390 aa22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 RBP1P09455 135 aa22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 IL10RBQ08334 325 aa22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 MSLNQ13421 630 aaPredicted RBP22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 LAMB3Q13751 1172 aa22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 LBRQ14739 615 aaKnown RBP22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 HERC3Q15034 1050 aa22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 SLC14A2Q15849 920 aa22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 PARP15Q460N3 678 aa22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 ALFQ53S48 1182 aa22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 CCNYL1Q8N7R7 359 aa22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 FBXO32Q969P5 355 aa22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 FAR2Q96K12 515 aa22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 IGSF5Q9NSI5 407 aa22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 COMMD8Q9NX08 183 aa22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 PPM1HQ9ULR3 514 aa22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 MRPL42Q9Y6G3 142 aaKnown RBP22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 NEMP1O14524 444 aa22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 CNTN5O94779 1100 aa22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 HAPLN1P10915 354 aaPredicted RBP22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 CYLC2Q14093 348 aaPredicted RBP22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 MRPL58Q14197 206 aaKnown RBP22.43■■□□□ 1.18
NKX2-1-201ENST00000354822 PSMD5Q16401 504 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms