RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 SCUBE3Q8IX30 993 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 ANKRD13AQ8IZ07 590 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 CPSF7Q8N684 471 aaKnown RBP7.7□□□□□ -1.18
BRCA1-201ENST00000352993 MFSD3Q96ES6 412 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 SH3YL1Q96HL8 342 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-201ENST00000352993 CPB2Q96IY4 423 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 SPATA17Q96L03 361 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 FCRL3Q96P31 734 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-201ENST00000352993 NAT9Q9BTE0 207 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 LHPPQ9H008 270 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 HMGXB4Q9UGU5 601 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 TRAF6Q9Y4K3 522 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 A0A0A0MRY4 1105 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 TCRBV3S1A0A5B6 114 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 SLC22A2O15244 555 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 ASNA1O43681 348 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 CABYRO75952 493 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 RSL1D1O76021 490 aaKnown RBP7.7□□□□□ -1.18
BRCA1-201ENST00000352993 NADKO95544 446 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-201ENST00000352993 BMP2P12643 396 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 RPS9P46781 194 aaKnown RBP7.7□□□□□ -1.18
BRCA1-201ENST00000352993 SEPHS1P49903 392 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 SLC12A2P55011 1212 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 TMBIM6P55061 237 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 SEMA5AQ13591 1074 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 GRM3Q14832 879 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 ARL13BQ3SXY8 428 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 SMUG1Q53HV7 270 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 ZYG11AQ6WRX3 759 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 FAM35AQ86V20 835 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 ERO1BQ86YB8 467 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 CENPNQ96H22 339 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-201ENST00000352993 ZDHHC15Q96MV8 337 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 SPATA13Q96N96 652 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 TWNKQ96RR1 684 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 CGREF1Q99674 301 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 SLC25A23Q9BV35 468 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 MROQ9BYG7 248 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 GLIS2Q9BZE0 524 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-201ENST00000352993 WDR12Q9GZL7 423 aaKnown RBP7.7□□□□□ -1.18
BRCA1-201ENST00000352993 LRRC40Q9H9A6 602 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 MTRRQ9UBK8 725 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 MORF4L1Q9UBU8 362 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 KLQ9UEF7 1012 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 BAG5Q9UL15 447 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 TMX2Q9Y320 296 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 TCAF1Q9Y4C2 921 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 CNTNAP4Q9C0A0 1308 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 NEMP2A6NFY4 417 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 C2CD4BA6NLJ0 364 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 TAF4O00268 1085 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 ANGPT2O15123 496 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 TIMM44O43615 452 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 ALDH1A2O94788 518 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 APOA4P06727 396 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 ENO2P09104 434 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-201ENST00000352993 MTHFD1P11586 935 aaKnown RBP7.7□□□□□ -1.18
BRCA1-201ENST00000352993 NCK1P16333 377 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 CCND2P30279 289 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 CDH5P33151 784 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-201ENST00000352993 POLR2IP36954 125 aaKnown RBP7.7□□□□□ -1.18
BRCA1-201ENST00000352993 MAGEA3P43357 314 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 PTPN9P43378 593 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 SLC36A3Q495N2 470 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 SPANXN3Q5MJ09 141 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 TMTC4Q5T4D3 741 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 RSBN1Q5VWQ0 802 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-201ENST00000352993 JADE1Q6IE81 842 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 KCNMB4Q86W47 210 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 SLC41A1Q8IVJ1 513 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 BRSK2Q8IWQ3 736 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 CMTR2Q8IYT2 770 aaKnown RBP7.7□□□□□ -1.18
BRCA1-201ENST00000352993 FSTL5Q8N475 847 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-201ENST00000352993 PDPRQ8NCN5 879 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 CLIP3Q96DZ5 547 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 TSPAN18Q96SJ8 248 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 RNF38Q9H0F5 515 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 LHX5Q9H2C1 402 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 UBP1Q9NZI7 540 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 DKK3Q9UBP4 350 aa7.7□□□□□ -1.18
BRCA1-201ENST00000352993 SYCE1LA8MT33 242 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 FAM155AB1AL88 458 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-201ENST00000352993 SDHDO14521 159 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 SNPHO15079 494 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 MFN2O95140 757 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 KRT8P05787 483 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 MZF1P28698 734 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-201ENST00000352993 NUMBP49757 651 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 COPZ1P61923 177 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 MRPS15P82914 257 aaKnown RBP7.69□□□□□ -1.18
BRCA1-201ENST00000352993 TRIM32Q13049 653 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 SLC13A2Q13183 592 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 NAB1Q13506 487 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 SPCS2Q15005 226 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 TRNP1Q6NT89 227 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 ANKRD13BQ86YJ7 626 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 EPHX4Q8IUS5 362 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 ANKRD52Q8NB46 1076 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 ZFP90Q8TF47 636 aa7.69□□□□□ -1.18
BRCA1-201ENST00000352993 ARNTL2Q8WYA1 636 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms