RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 TCTN1Q2MV58 587 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 CCDC153Q494R4 210 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 SETMARQ53H47 684 aaPredicted RBP6.1□□□□□ -1.43
CLCN3-201ENST00000347613 ZNF470Q6ECI4 717 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 IRGCQ6NXR0 463 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 DCLRE1AQ6PJP8 1040 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 METTL25Q8N6Q8 603 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 CCNYL1Q8N7R7 359 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 RSPH1Q8WYR4 309 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 RNF34Q969K3 372 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 PSMG2Q969U7 264 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 SLCO4A1Q96BD0 722 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 PTERQ96BW5 349 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 HMCESQ96FZ2 354 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 KCNA7Q96RP8 456 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 PKP2Q99959 881 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 IL22Q9GZX6 179 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 RBM22Q9NW64 420 aaKnown RBP eCLIP6.1□□□□□ -1.43
CLCN3-201ENST00000347613 CDH9Q9ULB4 789 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 E9PAM4 449 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 ACOT8O14734 319 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 TOMM70O94826 608 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 NELFEP18615 380 aaKnown RBP6.1□□□□□ -1.43
CLCN3-201ENST00000347613 GRK2P25098 689 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 CCND3P30281 292 aaPredicted RBP6.1□□□□□ -1.43
CLCN3-201ENST00000347613 ACVRL1P37023 503 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 THPOP40225 353 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 RPL14P50914 215 aaKnown RBP6.1□□□□□ -1.43
CLCN3-201ENST00000347613 CDH17Q12864 832 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 HNRNPDQ14103 355 aaKnown RBP6.1□□□□□ -1.43
CLCN3-201ENST00000347613 LIPMQ5VYY2 423 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 SMYD5Q6GMV2 418 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 CNTN4Q8IWV2 1026 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 SPPL2BQ8TCT7 592 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 APBB2Q92870 758 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 NSUN5Q96P11 429 aaKnown RBP6.1□□□□□ -1.43
CLCN3-201ENST00000347613 RHOJQ9H4E5 214 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 SP110Q9HB58 689 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 NDE1Q9NXR1 346 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 TXNDC16Q9P2K2 825 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 H3BMM5 538 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 PLOD2O00469 737 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 RNASEH2AO75792 299 aaKnown RBP6.1□□□□□ -1.43
CLCN3-201ENST00000347613 KLHL2O95198 593 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 SIX3O95343 332 aaPredicted RBP6.1□□□□□ -1.43
CLCN3-201ENST00000347613 WISP3O95389 354 aaPredicted RBP6.1□□□□□ -1.43
CLCN3-201ENST00000347613 ALDOCP09972 364 aaKnown RBP6.1□□□□□ -1.43
CLCN3-201ENST00000347613 SMIM18P0DKX4 95 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 GNAT1P11488 350 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 CA5AP35218 305 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 ETFBP38117 255 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 CD86P42081 329 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 LHX1P48742 406 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 CDH13P55290 713 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 NME5P56597 212 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 ECT2LQ008S8 904 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 DSG1Q02413 1049 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 DSC3Q14574 896 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 LBRQ14739 615 aaKnown RBP6.1□□□□□ -1.43
CLCN3-201ENST00000347613 ANO4Q32M45 955 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 DNAL1Q4LDG9 190 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 SLC39A12Q504Y0 691 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 SH2D4BQ5SQS7 431 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 RASIP1Q5U651 963 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 UGT2A3Q6UWM9 527 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 SATL1Q86VE3 508 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 SERINC5Q86VE9 423 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 PELI3Q8N2H9 469 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 C2CD4AQ8NCU7 369 aaPredicted RBP6.1□□□□□ -1.43
CLCN3-201ENST00000347613 SCYL1Q96KG9 808 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 TSGA13Q96PP4 275 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 PARK7Q99497 189 aaKnown RBP6.1□□□□□ -1.43
CLCN3-201ENST00000347613 ADAM2Q99965 735 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 POMKQ9H5K3 350 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 COPS7BQ9H9Q2 264 aaPredicted RBP6.1□□□□□ -1.43
CLCN3-201ENST00000347613 SLC27A5Q9Y2P5 690 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 CRYL1Q9Y2S2 319 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 TCAF1Q9Y4C2 921 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 ASB1Q9Y576 335 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 PCDHGA7Q9Y5G6 932 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 HEMK1Q9Y5R4 338 aaPredicted RBP6.1□□□□□ -1.43
CLCN3-201ENST00000347613 ARL5AQ9Y689 179 aa6.1□□□□□ -1.43
CLCN3-201ENST00000347613 ANKRD36A6QL64 1941 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 PLXNA3P51805 1871 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 C7orf72A4D263 438 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 M0QZQ0 153 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 MATN3O15232 486 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 PGM3O95394 542 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 MPOP05164 745 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 HMBSP08397 361 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 ENO3P13929 434 aaPredicted RBP6.09□□□□□ -1.43
CLCN3-201ENST00000347613 VCLP18206 1134 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 CHRM3P20309 590 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 MX2P20592 715 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 CES1P23141 567 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 HOXC13P31276 330 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 NPY2RP49146 381 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 CPT1AP50416 773 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 WNT3AP56704 352 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 RAB10P61026 200 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms