RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 SLC10A4Q96EP9 437 aa20.12■□□□□ 0.81
CDCA4-201ENST00000336219 CIB1Q99828 191 aa20.12■□□□□ 0.81
CDCA4-201ENST00000336219 TKTL2Q9H0I9 626 aa20.12■□□□□ 0.81
CDCA4-201ENST00000336219 WDCPQ9H6R7 721 aa20.12■□□□□ 0.81
CDCA4-201ENST00000336219 BCAP29Q9UHQ4 241 aa20.12■□□□□ 0.81
CDCA4-201ENST00000336219 AP4S1Q9Y587 144 aa20.12■□□□□ 0.81
CDCA4-201ENST00000336219 SNX13Q9Y5W8 968 aa20.12■□□□□ 0.81
CDCA4-201ENST00000336219 TLL2Q9Y6L7 1015 aa20.12■□□□□ 0.81
CDCA4-201ENST00000336219 MYBPHLA2RUH7 354 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 BTBD19C9JJ37 291 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 AP3B1O00203 1094 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 LRIG2O94898 1065 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 PRKAA2P54646 552 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 IKBKEQ14164 716 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 PRPSAP1Q14558 356 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 MFSD10Q14728 455 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 LRRC8EQ6NSJ5 796 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 LAYNQ6UX15 382 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 RIN3Q8TB24 985 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 STYXQ8WUJ0 223 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 SNRNP27Q8WVK2 155 aaKnown RBP20.11■□□□□ 0.81
CDCA4-201ENST00000336219 SLCO4A1Q96BD0 722 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 HSPBAP1Q96EW2 488 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 SENP8Q96LD8 212 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 TSNARE1Q96NA8 513 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 SDHDO14521 159 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 DDHD2O94830 711 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 PGK1P00558 417 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 F9P00740 461 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 AHSGP02765 367 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 HSPA13P48723 471 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 NDST2P52849 883 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 CTBP1Q13363 440 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 DUS1LQ6P1R4 473 aaKnown RBP20.11■□□□□ 0.81
CDCA4-201ENST00000336219 BHLHA9Q7RTU4 235 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 CNTD1Q8N815 330 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 NPLOC4Q8TAT6 608 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 EDEM1Q92611 657 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 CELF6Q96J87 481 aaKnown RBP20.11■□□□□ 0.81
CDCA4-201ENST00000336219 TMEM79Q9BSE2 394 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 TNFRSF12AQ9NP84 129 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 RRN3Q9NYV6 651 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 GTSE1Q9NYZ3 720 aa20.11■□□□□ 0.81
CDCA4-201ENST00000336219 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.11■□□□□ 0.81
CDCA4-201ENST00000336219 TARM1B6A8C7 271 aa20.1■□□□□ 0.81
CDCA4-201ENST00000336219 DNAJB2P25686 324 aa20.1■□□□□ 0.81
CDCA4-201ENST00000336219 CXCR3P49682 368 aa20.1■□□□□ 0.81
CDCA4-201ENST00000336219 ZNF135P52742 658 aaPredicted RBP20.1■□□□□ 0.81
CDCA4-201ENST00000336219 CREB5Q02930 508 aa20.1■□□□□ 0.81
CDCA4-201ENST00000336219 HERC3Q15034 1050 aa20.1■□□□□ 0.81
CDCA4-201ENST00000336219 PPP1R3AQ16821 1122 aa20.1■□□□□ 0.81
CDCA4-201ENST00000336219 TWF2Q6IBS0 349 aaKnown RBP20.1■□□□□ 0.81
CDCA4-201ENST00000336219 CNSTQ6PJW8 725 aa20.1■□□□□ 0.81
CDCA4-201ENST00000336219 OTOP3Q7RTS5 596 aa20.1■□□□□ 0.81
CDCA4-201ENST00000336219 LINC00523Q86TU6 105 aa20.1■□□□□ 0.81
CDCA4-201ENST00000336219 KLHDC8BQ8IXV7 354 aa20.1■□□□□ 0.81
CDCA4-201ENST00000336219 FTHL17Q9BXU8 183 aa20.1■□□□□ 0.81
CDCA4-201ENST00000336219 TRPC7Q9HCX4 862 aa20.1■□□□□ 0.81
CDCA4-201ENST00000336219 RNF181Q9P0P0 153 aa20.1■□□□□ 0.81
CDCA4-201ENST00000336219 RSL24D1Q9UHA3 163 aaKnown RBP20.1■□□□□ 0.81
CDCA4-201ENST00000336219 SLC22A2O15244 555 aa20.1■□□□□ 0.81
CDCA4-201ENST00000336219 STT3AP46977 705 aa20.1■□□□□ 0.81
CDCA4-201ENST00000336219 SLC12A1Q13621 1099 aa20.1■□□□□ 0.81
CDCA4-201ENST00000336219 HMBOX1Q6NT76 420 aa20.1■□□□□ 0.81
CDCA4-201ENST00000336219 USP33Q8TEY7 942 aa20.1■□□□□ 0.81
CDCA4-201ENST00000336219 LPGAT1Q92604 370 aa20.1■□□□□ 0.81
CDCA4-201ENST00000336219 ASB9Q96DX5 294 aa20.1■□□□□ 0.81
CDCA4-201ENST00000336219 TSPYL2Q9H2G4 693 aaPredicted RBP20.1■□□□□ 0.81
CDCA4-201ENST00000336219 NOL11Q9H8H0 719 aaKnown RBP20.1■□□□□ 0.81
CDCA4-201ENST00000336219 TIMMDC1Q9NPL8 285 aa20.1■□□□□ 0.81
CDCA4-201ENST00000336219 MRPL42Q9Y6G3 142 aaKnown RBP20.1■□□□□ 0.81
CDCA4-201ENST00000336219 MYLKQ15746 1914 aa20.09■□□□□ 0.81
CDCA4-201ENST00000336219 PRORSD1PA6NEY8 169 aa20.09■□□□□ 0.81
CDCA4-201ENST00000336219 HHLA1C9JL84 531 aa20.09■□□□□ 0.81
CDCA4-201ENST00000336219 CACNG3O60359 315 aa20.09■□□□□ 0.81
CDCA4-201ENST00000336219 MT-CO1P00395 513 aa20.09■□□□□ 0.81
CDCA4-201ENST00000336219 CKMT2P17540 419 aa20.09■□□□□ 0.81
CDCA4-201ENST00000336219 CRYBB1P53674 252 aaPredicted RBP20.09■□□□□ 0.81
CDCA4-201ENST00000336219 DCTN2Q13561 401 aaKnown RBP20.09■□□□□ 0.81
CDCA4-201ENST00000336219 RFTN1Q14699 578 aaPredicted RBP20.09■□□□□ 0.81
CDCA4-201ENST00000336219 PITRM1Q5JRX3 1037 aa20.09■□□□□ 0.81
CDCA4-201ENST00000336219 PM20D1Q6GTS8 502 aa20.09■□□□□ 0.81
CDCA4-201ENST00000336219 LPCAT2Q7L5N7 544 aa20.09■□□□□ 0.81
CDCA4-201ENST00000336219 HERC6Q8IVU3 1022 aa20.09■□□□□ 0.81
CDCA4-201ENST00000336219 STON2Q8WXE9 905 aa20.09■□□□□ 0.81
CDCA4-201ENST00000336219 ZNF597Q96LX8 424 aa20.09■□□□□ 0.81
CDCA4-201ENST00000336219 OSBPL2Q9H1P3 480 aa20.09■□□□□ 0.81
CDCA4-201ENST00000336219 CHCHD3Q9NX63 227 aaKnown RBP20.09■□□□□ 0.81
CDCA4-201ENST00000336219 CCDC167Q9P0B6 97 aa20.09■□□□□ 0.81
CDCA4-201ENST00000336219 VTI1BQ9UEU0 232 aa20.09■□□□□ 0.81
CDCA4-201ENST00000336219 TIMM13Q9Y5L4 95 aaPredicted RBP20.09■□□□□ 0.81
CDCA4-201ENST00000336219 FBP2O00757 339 aa20.09■□□□□ 0.81
CDCA4-201ENST00000336219 LHX1P48742 406 aa20.09■□□□□ 0.81
CDCA4-201ENST00000336219 TRIM25Q14258 630 aaKnown RBP20.09■□□□□ 0.81
CDCA4-201ENST00000336219 BORAQ6PGQ7 559 aa20.09■□□□□ 0.81
CDCA4-201ENST00000336219 CARM1Q86X55 608 aa20.09■□□□□ 0.81
CDCA4-201ENST00000336219 TXNDC5Q8NBS9 432 aaKnown RBP20.09■□□□□ 0.81
CDCA4-201ENST00000336219 SLC39A3Q9BRY0 314 aa20.09■□□□□ 0.81
CDCA4-201ENST00000336219 CYP4F12Q9HCS2 524 aa20.09■□□□□ 0.81
CDCA4-201ENST00000336219 SLC45A1Q9Y2W3 748 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms