RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 H3BMQ9 156 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 NRP1O14786 923 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 FARP2O94887 1054 aaPredicted RBP13.86□□□□□ -0.19
SYNE3-201ENST00000334258 LRPAP1P30533 357 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 NSUN2Q08J23 767 aaKnown RBP eCLIP13.86□□□□□ -0.19
SYNE3-201ENST00000334258 NME3Q13232 169 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 ITGADQ13349 1161 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 SLC12A1Q13621 1099 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 AARS2Q5JTZ9 985 aaKnown RBP13.86□□□□□ -0.19
SYNE3-201ENST00000334258 RWDD4Q6NW29 188 aaKnown RBP13.86□□□□□ -0.19
SYNE3-201ENST00000334258 ERO1BQ86YB8 467 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 FAM110BQ8TC76 370 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 RNF139Q8WU17 664 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 NDRG1Q92597 394 aaKnown RBP13.86□□□□□ -0.19
SYNE3-201ENST00000334258 COG8Q96MW5 612 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 PTPRHQ9HD43 1115 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 EGFL7Q9UHF1 273 aa13.86□□□□□ -0.19
SYNE3-201ENST00000334258 IPO11Q9UI26 975 aaKnown RBP13.86□□□□□ -0.19
SYNE3-201ENST00000334258 ATP6AP2A0A1C7CYW4 349 aa13.85□□□□□ -0.19
SYNE3-201ENST00000334258 ATP6AP2O75787 350 aa13.85□□□□□ -0.19
SYNE3-201ENST00000334258 SNRPB2P08579 225 aaKnown RBP13.85□□□□□ -0.19
SYNE3-201ENST00000334258 GSTT2P0CG29 244 aa13.85□□□□□ -0.19
SYNE3-201ENST00000334258 GSTT2BP0CG30 244 aa13.85□□□□□ -0.19
SYNE3-201ENST00000334258 ZNF12P17014 697 aa13.85□□□□□ -0.19
SYNE3-201ENST00000334258 HALP42357 657 aa13.85□□□□□ -0.19
SYNE3-201ENST00000334258 SULT1E1P49888 294 aa13.85□□□□□ -0.19
SYNE3-201ENST00000334258 PPP1R3AQ16821 1122 aa13.85□□□□□ -0.19
SYNE3-201ENST00000334258 DCAF6Q58WW2 860 aa13.85□□□□□ -0.19
SYNE3-201ENST00000334258 PPP4R4Q6NUP7 873 aa13.85□□□□□ -0.19
SYNE3-201ENST00000334258 DCDC5Q6ZRR9 648 aa13.85□□□□□ -0.19
SYNE3-201ENST00000334258 LYSMD3Q7Z3D4 306 aa13.85□□□□□ -0.19
SYNE3-201ENST00000334258 TMEM135Q86UB9 458 aa13.85□□□□□ -0.19
SYNE3-201ENST00000334258 OR9I1Q8NGQ6 314 aa13.85□□□□□ -0.19
SYNE3-201ENST00000334258 ISL2Q96A47 359 aa13.85□□□□□ -0.19
SYNE3-201ENST00000334258 MRPL45Q9BRJ2 306 aaKnown RBP13.85□□□□□ -0.19
SYNE3-201ENST00000334258 NAA50Q9GZZ1 169 aaKnown RBP13.85□□□□□ -0.19
SYNE3-201ENST00000334258 RPF2Q9H7B2 306 aaKnown RBP13.85□□□□□ -0.19
SYNE3-201ENST00000334258 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.85□□□□□ -0.19
SYNE3-201ENST00000334258 SERPINB7O75635 380 aa13.85□□□□□ -0.19
SYNE3-201ENST00000334258 IL10P22301 178 aa13.85□□□□□ -0.19
SYNE3-201ENST00000334258 NMBRP28336 390 aa13.85□□□□□ -0.19
SYNE3-201ENST00000334258 RXRGP48443 463 aa13.85□□□□□ -0.19
SYNE3-201ENST00000334258 PLK1P53350 603 aa13.85□□□□□ -0.19
SYNE3-201ENST00000334258 PRKAA2P54646 552 aa13.85□□□□□ -0.19
SYNE3-201ENST00000334258 CSE1LP55060 971 aaKnown RBP13.85□□□□□ -0.19
SYNE3-201ENST00000334258 SEPT6Q14141 434 aa13.85□□□□□ -0.19
SYNE3-201ENST00000334258 NR1D2Q14995 579 aa13.85□□□□□ -0.19
SYNE3-201ENST00000334258 IL31Q6EBC2 164 aa13.85□□□□□ -0.19
SYNE3-201ENST00000334258 AFAP1L2Q8N4X5 818 aa13.85□□□□□ -0.19
SYNE3-201ENST00000334258 ANKRD52Q8NB46 1076 aa13.85□□□□□ -0.19
SYNE3-201ENST00000334258 KIF12Q96FN5 646 aa13.85□□□□□ -0.19
SYNE3-201ENST00000334258 ZNF487B1APH4 448 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 GABBR2O75899 941 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 SBK3P0C264 359 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 ZNF182P17025 639 aaPredicted RBP13.84□□□□□ -0.19
SYNE3-201ENST00000334258 CD247P20963 164 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 CDH3P22223 829 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 PTPN9P43378 593 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 YAP1P46937 504 aaKnown RBP13.84□□□□□ -0.19
SYNE3-201ENST00000334258 BCAP31P51572 246 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 SLC12A2P55011 1212 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 MERTKQ12866 999 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 EGFLAMQ63HQ2 1017 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 EFCAB12Q6NXP0 572 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 RPS27LQ71UM5 84 aaKnown RBP13.84□□□□□ -0.19
SYNE3-201ENST00000334258 SHCBP1Q8NEM2 672 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 OR2T34Q8NGX1 318 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 OR2T3Q8NH03 318 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 STYXQ8WUJ0 223 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 SLC35F5Q8WV83 523 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 FBXL20Q96IG2 436 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 FAM167AQ96KS9 214 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 MTG1Q9BT17 334 aaPredicted RBP13.84□□□□□ -0.19
SYNE3-201ENST00000334258 FZD8Q9H461 694 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 POMKQ9H5K3 350 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 RABL2AQ9UBK7 228 aaPredicted RBP13.84□□□□□ -0.19
SYNE3-201ENST00000334258 ADAMTS5Q9UNA0 930 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 TNFSF13BQ9Y275 285 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 ANKRD6Q9Y2G4 727 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 TRIM17Q9Y577 477 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 N6AMT1Q9Y5N5 214 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 FUCA1P04066 466 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 MYCLP1P12525 358 aaPredicted RBP13.84□□□□□ -0.19
SYNE3-201ENST00000334258 EIF2B2P49770 351 aaKnown RBP13.84□□□□□ -0.19
SYNE3-201ENST00000334258 TRAP1Q12931 704 aaKnown RBP13.84□□□□□ -0.19
SYNE3-201ENST00000334258 CTBP1Q13363 440 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 RAB39AQ14964 217 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 SPPL2CQ8IUH8 684 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 TBC1D15Q8TC07 691 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 TOP1MTQ969P6 601 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 MPHOSPH6Q99547 160 aaKnown RBP13.84□□□□□ -0.19
SYNE3-201ENST00000334258 SNX25Q9H3E2 840 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 PDZD7Q9H5P4 517 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 CHST12Q9NRB3 414 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 RNF19AQ9NV58 838 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 GID8Q9NWU2 228 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 TSC22D4Q9Y3Q8 395 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 TCRBV3S1A0A5B6 114 aa13.84□□□□□ -0.19
SYNE3-201ENST00000334258 ZBTB24O43167 697 aaPredicted RBP13.84□□□□□ -0.19
SYNE3-201ENST00000334258 NRP2O60462 931 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms