RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 PRPF4O43172 522 aaKnown RBP eCLIP16.17■□□□□ 0.18
SYNM-201ENST00000328642 USP1O94782 785 aa16.17■□□□□ 0.18
SYNM-201ENST00000328642 LUC7L3O95232 432 aaKnown RBP16.17■□□□□ 0.18
SYNM-201ENST00000328642 TACR2P21452 398 aa16.17■□□□□ 0.18
SYNM-201ENST00000328642 RAB10P61026 200 aa16.17■□□□□ 0.18
SYNM-201ENST00000328642 CYP4F8P98187 520 aa16.17■□□□□ 0.18
SYNM-201ENST00000328642 ARL13AQ5H913 290 aaPredicted RBP16.17■□□□□ 0.18
SYNM-201ENST00000328642 BRMS1LQ5PSV4 323 aa16.17■□□□□ 0.18
SYNM-201ENST00000328642 ARMC12Q5T9G4 340 aa16.17■□□□□ 0.18
SYNM-201ENST00000328642 CLEC6AQ6EIG7 209 aa16.17■□□□□ 0.18
SYNM-201ENST00000328642 RETSATQ6NUM9 610 aa16.17■□□□□ 0.18
SYNM-201ENST00000328642 PIGWQ7Z7B1 504 aa16.17■□□□□ 0.18
SYNM-201ENST00000328642 FBXO39Q8N4B4 442 aa16.17■□□□□ 0.18
SYNM-201ENST00000328642 TRPV1Q8NER1 839 aa16.17■□□□□ 0.18
SYNM-201ENST00000328642 BTN2A3PQ96KV6 586 aa16.17■□□□□ 0.18
SYNM-201ENST00000328642 MYCBPQ99417 103 aaPredicted RBP16.17■□□□□ 0.18
SYNM-201ENST00000328642 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.17■□□□□ 0.18
SYNM-201ENST00000328642 F8W8V4 182 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 ESRRBO95718 433 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 MPOP05164 745 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 IL4RP24394 825 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 SKIV2LQ15477 1246 aaKnown RBP16.16■□□□□ 0.18
SYNM-201ENST00000328642 MORN1Q5T089 497 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 SPPL2BQ8TCT7 592 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 PPP1R10Q96QC0 940 aaKnown RBP16.16■□□□□ 0.18
SYNM-201ENST00000328642 GATA5Q9BWX5 397 aaPredicted RBP16.16■□□□□ 0.18
SYNM-201ENST00000328642 VRTNQ9H8Y1 702 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 COG4Q9H9E3 785 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 CATSPERZQ9NTU4 200 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 COPG2Q9UBF2 871 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 AGO1Q9UL18 857 aaKnown RBP16.16■□□□□ 0.18
SYNM-201ENST00000328642 SLC45A1Q9Y2W3 748 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 ARL5AQ9Y689 179 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 RP1L1Q8IWN7 2480 aaPredicted RBP16.16■□□□□ 0.18
SYNM-201ENST00000328642 SNAP91O60641 907 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 PLIN3O60664 434 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 CXCL14O95715 111 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 AMHP03971 560 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 RPLP2P05387 115 aaKnown RBP16.16■□□□□ 0.18
SYNM-201ENST00000328642 MRPS22P82650 360 aaKnown RBP16.16■□□□□ 0.18
SYNM-201ENST00000328642 CCDC153Q494R4 210 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 GSTCDQ8NEC7 633 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 ING5Q8WYH8 240 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 TRIM54Q9BYV2 358 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 BRD8Q9H0E9 1235 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 ASB8Q9H765 288 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 DYRK4Q9NR20 520 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 TAS2R13Q9NYV9 303 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 SOX13Q9UN79 622 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 C1orf232A0A0U1RR37 186 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 A0A1W2PQ45 241 aaPredicted RBP16.16■□□□□ 0.18
SYNM-201ENST00000328642 A0A1W2PQY0 241 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 NFKBIAP25963 317 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 RNF43Q68DV7 783 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 TMEM154Q6P9G4 183 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 RNF19BQ6ZMZ0 732 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 ZNF366Q8N895 744 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 KHSRPQ92945 711 aaKnown RBP eCLIP16.16■□□□□ 0.18
SYNM-201ENST00000328642 ZNF333Q96JL9 665 aa16.16■□□□□ 0.18
SYNM-201ENST00000328642 SMG9Q9H0W8 520 aaKnown RBP16.16■□□□□ 0.18
SYNM-201ENST00000328642 ENO4A6NNW6 628 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 CCL16O15467 120 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 RGS4P49798 205 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 USP46P62068 366 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 BCL2L1Q07817 233 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 PRKAA1Q13131 559 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 TMPRSS6Q8IU80 811 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 CNPY4Q8N129 248 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 PLD6Q8N2A8 252 aaKnown RBP16.15■□□□□ 0.18
SYNM-201ENST00000328642 CXorf38Q8TB03 319 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 DPF3Q92784 378 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 MRPL46Q9H2W6 279 aaKnown RBP16.15■□□□□ 0.18
SYNM-201ENST00000328642 VWA7Q9Y334 891 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 TIMM22Q9Y584 194 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 SNX13Q9Y5W8 968 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 RBP1P09455 135 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 RPL14P50914 215 aaKnown RBP16.15■□□□□ 0.18
SYNM-201ENST00000328642 WASHC5Q12768 1159 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 NR6A1Q15406 480 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 SYTL3Q4VX76 610 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 COL24A1Q17RW2 1714 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 A0A0D9SEW6 157 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 IQCF5A8MTL0 148 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 APOA4P06727 396 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 HAPLN1P10915 354 aaPredicted RBP16.15■□□□□ 0.18
SYNM-201ENST00000328642 FGFR3P22607 806 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 PPP3CCP48454 512 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 TCEAL1Q15170 157 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 FAM156AQ8NDB6 213 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 FAM13CQ8NE31 585 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 ZMIZ2Q8NF64 920 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 RNF217Q8TC41 542 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 SDCCAG3Q96C92 435 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 SUSD3Q96L08 255 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 C1orf50Q9BV19 199 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 Q9H521 79 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 EFCAB1Q9HAE3 211 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 HPS4Q9NQG7 708 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 PCDHB8Q9UN66 801 aa16.15■□□□□ 0.18
SYNM-201ENST00000328642 TMEM233B4DJY2 109 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms