RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 FAM117BQ6P1L5 589 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 GADL1Q6ZQY3 521 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 TMEM26Q6ZUK4 368 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 SPRED1Q7Z699 444 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 TMEM192Q8IY95 271 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 LEMD2Q8NC56 503 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 MFSD3Q96ES6 412 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 WNK4Q96J92 1243 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 CEP41Q9BYV8 373 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 SETD4Q9NVD3 440 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 DPP3Q9NY33 737 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 ADAMTS5Q9UNA0 930 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 AURKCQ9UQB9 309 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 TRIM17Q9Y577 477 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 PTPRFP10586 1907 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 PHGDHO43175 533 aaKnown RBP12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 B4GALT5O43286 388 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 XPOTO43592 962 aaKnown RBP12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 SEC24DO94855 1032 aaPredicted RBP12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 GPIP06744 558 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 GJA8P48165 433 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 HLCSP50747 726 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 SLC7A2P52569 658 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 GTF2A2P52657 109 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 ATXN1P54253 815 aaKnown RBP12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 BNIP3Q12983 259 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 PRPSAP1Q14558 356 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 CCNYL2Q5T2Q4 361 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 ARHGAP17Q68EM7 881 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 OGFOD2Q6N063 350 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 LRRC71Q8N4P6 559 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 MINDY2Q8NBR6 621 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 MOCOSQ96EN8 888 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 MAGED4Q96JG8 741 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 B3GNT5Q9BYG0 378 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 UNKQ9C0B0 810 aaKnown RBP12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 MUC13Q9H3R2 512 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 AS3MTQ9HBK9 375 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 TBC1D13Q9NVG8 400 aa12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 TRNAU1APQ9NX07 287 aaKnown RBP12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 SCHIP1Q9P0W5 487 aaPredicted RBP12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 GPC6Q9Y625 555 aaPredicted RBP12.5□□□□□ -0.41
CHMP2B-201ENST00000263780 COL11A2P13942 1736 aaPredicted RBP12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 GOLGA8TH3BQL2 631 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 DLGAP1O14490 977 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 CNOT3O75175 753 aaKnown RBP12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 GNAO1P09471 354 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 TGFB3P10600 412 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 JUNBP17275 347 aaPredicted RBP12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 CYP2B6P20813 491 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 BACE1P56817 501 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 GALNT2Q10471 571 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 GALNT1Q10472 559 aaPredicted RBP12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 TRAF2Q12933 501 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 TRIM16LQ309B1 348 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 LINC00523Q86TU6 105 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 ACOT1Q86TX2 421 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 CENPLQ8N0S6 344 aaPredicted RBP12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 PYROXD2Q8N2H3 581 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 RAB2BQ8WUD1 216 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 VAT1Q99536 393 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 SLX1AQ9BQ83 275 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 NFKBIZQ9BYH8 718 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 ACSS2Q9NR19 701 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 NDUFAF1Q9Y375 327 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 FAM32AQ9Y421 112 aaKnown RBP12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 FOXD2O60548 495 aaPredicted RBP12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 ADAM23O75077 832 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 RAD17O75943 681 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 HSD17B1P14061 328 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 JAK1P23458 1154 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 PTPN3P26045 913 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 MATKP42679 507 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 MBTD1Q05BQ5 628 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 BST2Q10589 180 aaKnown RBP12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 TMEM132BQ14DG7 1078 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 SLC25A52Q3SY17 297 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 DCAF6Q58WW2 860 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 CERCAMQ5T4B2 595 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 KCTD11Q693B1 232 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 NAPEPLDQ6IQ20 393 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 TMEM53Q6P2H8 277 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 UNC93AQ86WB7 457 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 ACVR1CQ8NER5 493 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 FLAD1Q8NFF5 587 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 ACDQ96AP0 544 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 PPP1R10Q96QC0 940 aaKnown RBP12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 MAGEB5Q9BZ81 275 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 GBA3Q9H227 469 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 POMKQ9H5K3 350 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 CHRAC1Q9NRG0 131 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 RIC8BQ9NVN3 520 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 SMPD3Q9NY59 655 aaPredicted RBP12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 ACTR3BQ9P1U1 418 aa12.49□□□□□ -0.41
CHMP2B-201ENST00000263780 USP12O75317 370 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 CLPXO76031 633 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 CPNE6O95741 557 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 EPHX2P34913 555 aa12.48□□□□□ -0.41
CHMP2B-201ENST00000263780 EIF2B2P49770 351 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms