RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 CNGA2Q16280 664 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 PPP1R26Q5T8A7 1209 aaPredicted RBP12.19□□□□□ -0.46
COL8A1-201ENST00000261037 HIST3H2AQ7L7L0 130 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 ALYREFQ86V81 257 aaKnown RBP12.19□□□□□ -0.46
COL8A1-201ENST00000261037 UNC93AQ86WB7 457 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 NELL1Q92832 810 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 HIST1H2ACQ93077 130 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 RNF157Q96PX1 679 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 EPB41L4BQ9H329 900 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 BRD9Q9H8M2 597 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 EHD3Q9NZN3 535 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 ST3GAL5Q9UNP4 418 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 MRPS23Q9Y3D9 190 aaKnown RBP12.19□□□□□ -0.46
COL8A1-201ENST00000261037 SNPHO15079 494 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 HNRNPLP14866 589 aaKnown RBP eCLIP12.19□□□□□ -0.46
COL8A1-201ENST00000261037 GTF2BQ00403 316 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 FMO1Q01740 532 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 ZFP1Q6P2D0 407 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 STK32AQ8WU08 396 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 SKA1Q96BD8 255 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 CEP44Q9C0F1 390 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 ACSS2Q9NR19 701 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 MORF4L1Q9UBU8 362 aa12.19□□□□□ -0.46
COL8A1-201ENST00000261037 ARIH1Q9Y4X5 557 aaPredicted RBP12.19□□□□□ -0.46
COL8A1-201ENST00000261037 LRRC14BA6NHZ5 514 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 PDE2AO00408 941 aaPredicted RBP12.18□□□□□ -0.46
COL8A1-201ENST00000261037 ZW10O43264 779 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 ELF3P78545 371 aaPredicted RBP12.18□□□□□ -0.46
COL8A1-201ENST00000261037 TARBP2Q15633 366 aaKnown RBP12.18□□□□□ -0.46
COL8A1-201ENST00000261037 PABPC1LQ4VXU2 614 aaKnown RBP12.18□□□□□ -0.46
COL8A1-201ENST00000261037 TREML2Q5T2D2 321 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 NKAPQ8N5F7 415 aaKnown RBP12.18□□□□□ -0.46
COL8A1-201ENST00000261037 C2orf73Q8N5S3 287 aaPredicted RBP12.18□□□□□ -0.46
COL8A1-201ENST00000261037 SCAIQ8N9R8 606 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 MECRQ9BV79 373 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 POLR1BQ9H9Y6 1135 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 ERBB2P04626 1255 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 IL6P05231 212 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 TKTP29401 623 aaKnown RBP12.18□□□□□ -0.46
COL8A1-201ENST00000261037 TAS2R40P59535 323 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 RPL7AP62424 266 aaKnown RBP12.18□□□□□ -0.46
COL8A1-201ENST00000261037 ZNHIT3Q15649 155 aaPredicted RBP12.18□□□□□ -0.46
COL8A1-201ENST00000261037 NAIF1Q69YI7 327 aaPredicted RBP12.18□□□□□ -0.46
COL8A1-201ENST00000261037 PARGQ86W56 976 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 KLHL5Q96PQ7 755 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 TMEM191CA6NGB0 347 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 CAPN15O75808 1086 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 TLX1P31314 330 aaPredicted RBP12.18□□□□□ -0.46
COL8A1-201ENST00000261037 BRCC3P46736 316 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 RAB10P61026 200 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 PTPRNQ16849 979 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 ZNF549Q6P9A3 640 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 UTS2BQ765I0 119 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 KRT73Q86Y46 540 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 OFCC1Q8IZS5 231 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 RAB21Q9UL25 225 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 OGDHLQ9ULD0 1010 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 MYO5BQ9ULV0 1848 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 NPEPPSL1A6NEC2 478 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 RCCD1A6NED2 376 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 H3BMM5 538 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 ECM1Q16610 540 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 C10orf107Q8IVU9 208 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 ADHFE1Q8IWW8 467 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 OR4A15Q8NGL6 344 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 VPS35Q96QK1 796 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 KIFC1Q9BW19 673 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 TMEM216Q9P0N5 145 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 OR10H1Q9Y4A9 318 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 MSI1O43347 362 aaKnown RBP12.18□□□□□ -0.46
COL8A1-201ENST00000261037 SNRPB2P08579 225 aaKnown RBP12.18□□□□□ -0.46
COL8A1-201ENST00000261037 RPL4P36578 427 aaKnown RBP12.18□□□□□ -0.46
COL8A1-201ENST00000261037 C21orf59P57076 290 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 SNAP47Q5SQN1 464 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 APTXQ7Z2E3 356 aaKnown RBP12.18□□□□□ -0.46
COL8A1-201ENST00000261037 IPCEF1Q8WWN9 437 aaPredicted RBP12.18□□□□□ -0.46
COL8A1-201ENST00000261037 ZFRQ96KR1 1074 aaKnown RBP12.18□□□□□ -0.46
COL8A1-201ENST00000261037 KLHL31Q9H511 634 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 POLR3HQ9Y535 204 aaPredicted RBP12.18□□□□□ -0.46
COL8A1-201ENST00000261037 UBIAD1Q9Y5Z9 338 aa12.18□□□□□ -0.46
COL8A1-201ENST00000261037 NCANO14594 1321 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 ISM1B1AKI9 464 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 SGTAO43765 313 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 GUCY1B2O75343 617 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 MC4RP32245 332 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 SPIBQ01892 262 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 RAPSNQ13702 412 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 INO80DQ53TQ3 878 aaPredicted RBP12.17□□□□□ -0.46
COL8A1-201ENST00000261037 PROSER1Q86XN7 944 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 OR52L1Q8NGH7 329 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 NDRG1Q92597 394 aaKnown RBP12.17□□□□□ -0.46
COL8A1-201ENST00000261037 LINGO1Q96FE5 620 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 QRFPRQ96P65 431 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 ENOPH1Q9UHY7 261 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 MTF2Q9Y483 593 aaPredicted RBP12.17□□□□□ -0.46
COL8A1-201ENST00000261037 NEDD8-MDP1E9PL57 170 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 CLCN5P51795 746 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 SRSF11Q05519 484 aaKnown RBP12.17□□□□□ -0.46
COL8A1-201ENST00000261037 PPIDQ08752 370 aaKnown RBP12.17□□□□□ -0.46
COL8A1-201ENST00000261037 AUHQ13825 339 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms