RNA–Protein interactions for RNA: ENST00000255320.6

HMGB1P5-201, Transcript of high mobility group box 1 pseudogene 5, humanhuman

BASIC

Gene HMGB1P5, Length 642 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P5-201ENST00000255320 HOXD9P28356 352 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 CDAP32320 146 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 TNFSF8P32971 234 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 PSMB10P40306 273 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 UBA7P41226 1012 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 GPR12P47775 334 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 GABRB2P47870 512 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 PIP4K2AP48426 406 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 CXCR3P49682 368 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 GNAQP50148 359 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 CSTF3Q12996 717 aaKnown RBP4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 FRG1Q14331 258 aaKnown RBP4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 VEPH1Q14D04 833 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 WTAPQ15007 396 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 HIST2H2ACQ16777 129 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 DPCR1Q3MIW9 517 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 SUPT20HL1Q3ZLR7 823 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 GALNT5Q7Z7M9 940 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 NOXA1Q86UR1 476 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 TDRPQ86YL5 185 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 GPSM1Q86YR5 675 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 TMC8Q8IU68 726 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 ARHGAP12Q8IWW6 846 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 ZDHHC23Q8IYP9 409 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 FAM185AQ8N0U4 392 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 MCPH1Q8NEM0 835 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 SNRNP27Q8WVK2 155 aaKnown RBP4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 NELL1Q92832 810 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 SMARCE1Q969G3 411 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 BBS4Q96RK4 519 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 QTRT1Q9BXR0 403 aaKnown RBP4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 SEMA4CQ9C0C4 833 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 TKTL2Q9H0I9 626 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 SPATS2LQ9NUQ6 558 aaKnown RBP4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 PLK2Q9NYY3 685 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 MSRB1Q9NZV6 116 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 POLG2Q9UHN1 485 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 CARD8Q9Y2G2 431 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 RAP2CQ9Y3L5 183 aa4.53□□□□□ -1.68
HMGB1P5-201ENST00000255320 A0A096LPK6 155 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 A0A1W2PPC1 479 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 A0A1W2PRG0 241 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 hCG_1807616A0A1W2PRN6 198 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 FRMD3A2A2Y4 597 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 C17orf102A2RUQ5 167 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 TTC36A6NLP5 189 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 KLRF2D3W0D1 207 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 USP17L23D6RBM5 183 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 MASP2O00187 686 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 ADAM10O14672 748 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 PRPF4O43172 522 aaKnown RBP eCLIP4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 AKAP8O43823 692 aaKnown RBP4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 KLK8O60259 260 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 TMCC2O75069 709 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 PGM3O95394 542 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 HOXB5P09067 269 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 IRF1P10914 325 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 DCTDP32321 178 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 ACSL1P33121 698 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 PPARGP37231 505 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 ID2Q02363 134 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 NUCB1Q02818 461 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 ZNF91Q05481 1191 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 PPP2R5BQ15173 497 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 COL28A1Q2UY09 1125 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 CXorf66Q5JRM2 361 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 C6orf10Q5SRN2 563 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 HMBOX1Q6NT76 420 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 TMEM71Q6P5X7 295 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 SRBD1Q8N5C6 995 aaKnown RBP4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 HORMAD2Q8N7B1 307 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 YME1L1Q96TA2 773 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 FTOQ9C0B1 505 aaKnown RBP eCLIP4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 B3GNT4Q9C0J1 378 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 MVB12BQ9H7P6 319 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 MAP6D1Q9H9H5 199 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 ASAH2Q9NR71 780 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 PLSCR4Q9NRQ2 329 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 ANKEF1Q9NU02 776 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 HAO1Q9UJM8 370 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 A3GALT2U3KPV4 340 aa4.52□□□□□ -1.69
HMGB1P5-201ENST00000255320 FAM90A8PA6NJQ4 464 aa4.51□□□□□ -1.69
HMGB1P5-201ENST00000255320 CGB1A6NKQ9 187 aa4.51□□□□□ -1.69
HMGB1P5-201ENST00000255320 EIF3CLB5ME19 914 aaKnown RBP4.51□□□□□ -1.69
HMGB1P5-201ENST00000255320 ZNF814B7Z6K7 855 aa4.51□□□□□ -1.69
HMGB1P5-201ENST00000255320 HSPB6O14558 160 aa4.51□□□□□ -1.69
HMGB1P5-201ENST00000255320 KIF1CO43896 1103 aaKnown RBP4.51□□□□□ -1.69
HMGB1P5-201ENST00000255320 TLR2O60603 784 aa4.51□□□□□ -1.69
HMGB1P5-201ENST00000255320 ATG13O75143 517 aa4.51□□□□□ -1.69
HMGB1P5-201ENST00000255320 MT-CYBP00156 380 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P5-201ENST00000255320 FAM90A13PP0C7W8 464 aa4.51□□□□□ -1.69
HMGB1P5-201ENST00000255320 FAM90A24PP0C7X0 464 aa4.51□□□□□ -1.69
HMGB1P5-201ENST00000255320 CSH1P0DML2 217 aa4.51□□□□□ -1.69
HMGB1P5-201ENST00000255320 CSH2P0DML3 217 aa4.51□□□□□ -1.69
HMGB1P5-201ENST00000255320 CHRNB1P11230 501 aa4.51□□□□□ -1.69
HMGB1P5-201ENST00000255320 ITGAXP20702 1163 aa4.51□□□□□ -1.69
HMGB1P5-201ENST00000255320 CLCN5P51795 746 aa4.51□□□□□ -1.69
HMGB1P5-201ENST00000255320 F2RL1P55085 397 aa4.51□□□□□ -1.69
HMGB1P5-201ENST00000255320 TMPRSS3P57727 454 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms