RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 ARL4DP49703 201 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 CLCN3P51790 818 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 TPI1P60174 286 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 PSME3P61289 254 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 BMPR2Q13873 1038 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 INAQ16352 499 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 TRIM71Q2Q1W2 868 aaKnown RBP4.19□□□□□ -1.74
UBE4A-201ENST00000252108 TTC23Q5W5X9 447 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 PM20D1Q6GTS8 502 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 PRR23CQ6ZRP0 262 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 CEP68Q76N32 757 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 AQP12AQ8IXF9 295 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 MPP5Q8N3R9 675 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 DHRSXQ8N5I4 330 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 EMC1Q8N766 993 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 BHLHE22Q8NFJ8 381 aaPredicted RBP4.19□□□□□ -1.74
UBE4A-201ENST00000252108 HMGCLL1Q8TB92 370 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 ACSF2Q96CM8 615 aaPredicted RBP4.19□□□□□ -1.74
UBE4A-201ENST00000252108 RHBDL2Q9NX52 303 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 REV3LO60673 3130 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 EME2A4GXA9 379 aaPredicted RBP4.19□□□□□ -1.74
UBE4A-201ENST00000252108 BCAS2O75934 225 aaPredicted RBP4.19□□□□□ -1.74
UBE4A-201ENST00000252108 USP1O94782 785 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 APOA1P02647 267 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 OCM2P0CE71 109 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 OCMP0CE72 109 aaPredicted RBP4.19□□□□□ -1.74
UBE4A-201ENST00000252108 S100A1P23297 94 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 ARNTP27540 789 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 CD68P34810 354 aaPredicted RBP4.19□□□□□ -1.74
UBE4A-201ENST00000252108 DEFA1P59665 94 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 DEFA3P59666 94 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 FOXM1Q08050 763 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 TUBA3CQ13748 450 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 PDE1CQ14123 709 aaPredicted RBP4.19□□□□□ -1.74
UBE4A-201ENST00000252108 DSC3Q14574 896 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 ZNF846Q147U1 533 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 RGS21Q2M5E4 152 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 RFX4Q33E94 735 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 ZBED5Q49AG3 693 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 DENND5AQ6IQ26 1287 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 IYDQ6PHW0 289 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 HACD2Q6Y1H2 254 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 DENND5BQ6ZUT9 1274 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 MOB2Q70IA6 237 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 ANKRD23Q86SG2 305 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 CLEC4CQ8WTT0 213 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 CASP10Q92851 521 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 ASB9Q96DX5 294 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 AGAP3Q96P47 875 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 RBBP8Q99708 897 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 MRPL57Q9BQC6 102 aaKnown RBP4.19□□□□□ -1.74
UBE4A-201ENST00000252108 ARHGAP9Q9BRR9 750 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 SNRNP25Q9BV90 132 aaKnown RBP4.19□□□□□ -1.74
UBE4A-201ENST00000252108 MRPL46Q9H2W6 279 aaKnown RBP4.19□□□□□ -1.74
UBE4A-201ENST00000252108 DPEP3Q9H4B8 488 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 DNAAF2Q9NVR5 837 aaKnown RBP4.19□□□□□ -1.74
UBE4A-201ENST00000252108 IL37Q9NZH6 218 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 DENND4AQ7Z401 1863 aa4.19□□□□□ -1.74
UBE4A-201ENST00000252108 E9PBE3 544 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 GSTA4O15217 222 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 HUS1O60921 280 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 BEST1O76090 585 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 SNRPB2P08579 225 aaKnown RBP4.18□□□□□ -1.74
UBE4A-201ENST00000252108 ATP6V1E1P36543 226 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 SULT1E1P49888 294 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 NDST1P52848 882 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 USP46P62068 366 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 PITX1P78337 314 aaPredicted RBP4.18□□□□□ -1.74
UBE4A-201ENST00000252108 UBAP2LQ14157 1087 aaKnown RBP4.18□□□□□ -1.74
UBE4A-201ENST00000252108 C15orf59Q2T9L4 293 aaPredicted RBP4.18□□□□□ -1.74
UBE4A-201ENST00000252108 USP41Q3LFD5 358 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 SV2CQ496J9 727 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 ZNF618Q5T7W0 954 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 C9orf57Q5W0N0 161 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 KIAA0408Q6ZU52 694 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 TMC7Q7Z402 723 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 KBTBD2Q8IY47 623 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 DSELQ8IZU8 1212 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 SFRP1Q8N474 314 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 SNX31Q8N9S9 440 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 ZBTB8BQ8NAP8 495 aaPredicted RBP4.18□□□□□ -1.74
UBE4A-201ENST00000252108 OR6B3Q8NGW1 331 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 NPLOC4Q8TAT6 608 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 URGCPQ8TCY9 931 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 TSPEARQ8WU66 669 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 BRI3BPQ8WY22 251 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 NTAN1Q96AB6 310 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 BCL7BQ9BQE9 202 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 MED10Q9BTT4 135 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 C12orf65Q9H3J6 166 aaKnown RBP4.18□□□□□ -1.74
UBE4A-201ENST00000252108 RHOJQ9H4E5 214 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 ANKHQ9HCJ1 492 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 SLC52A3Q9NQ40 469 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 ARHGEF38Q9NXL2 777 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 TMED5Q9Y3A6 229 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 FAM170AA1A519 330 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 IFRD1O00458 451 aaPredicted RBP4.18□□□□□ -1.74
UBE4A-201ENST00000252108 MRASO14807 208 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 UGT1A9O60656 530 aa4.18□□□□□ -1.74
UBE4A-201ENST00000252108 CRTAMO95727 393 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms