RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 SNX15Q9NRS6 342 aa23.6■■□□□ 1.37
SYNGR3-201ENST00000248121 SIRPGQ9P1W8 387 aa23.6■■□□□ 1.37
SYNGR3-201ENST00000248121 KLHL14Q9P2G3 628 aa23.6■■□□□ 1.37
SYNGR3-201ENST00000248121 CDH22Q9UJ99 828 aa23.6■■□□□ 1.37
SYNGR3-201ENST00000248121 STOML2Q9UJZ1 356 aa23.6■■□□□ 1.37
SYNGR3-201ENST00000248121 TRAV19A0A0A6YYK7 116 aa23.6■■□□□ 1.37
SYNGR3-201ENST00000248121 TMCO4Q5TGY1 634 aa23.6■■□□□ 1.37
SYNGR3-201ENST00000248121 BBS7Q8IWZ6 715 aa23.6■■□□□ 1.37
SYNGR3-201ENST00000248121 FITM2Q8N6M3 262 aa23.6■■□□□ 1.37
SYNGR3-201ENST00000248121 PTCD2Q8WV60 388 aaKnown RBP23.6■■□□□ 1.37
SYNGR3-201ENST00000248121 KLF11O14901 512 aa23.59■■□□□ 1.37
SYNGR3-201ENST00000248121 FSBPO95073 299 aa23.59■■□□□ 1.37
SYNGR3-201ENST00000248121 GABRB3P28472 473 aa23.59■■□□□ 1.37
SYNGR3-201ENST00000248121 HOXA9P31269 272 aa23.59■■□□□ 1.37
SYNGR3-201ENST00000248121 ACTN3Q08043 901 aaPredicted RBP23.59■■□□□ 1.37
SYNGR3-201ENST00000248121 OVGP1Q12889 678 aa23.59■■□□□ 1.37
SYNGR3-201ENST00000248121 PRSS36Q5K4E3 855 aa23.59■■□□□ 1.37
SYNGR3-201ENST00000248121 TSSK1BQ9BXA7 367 aa23.59■■□□□ 1.37
SYNGR3-201ENST00000248121 MAGEH1Q9H213 219 aa23.59■■□□□ 1.37
SYNGR3-201ENST00000248121 LEFTY2O00292 366 aa23.58■■□□□ 1.37
SYNGR3-201ENST00000248121 VAPBO95292 243 aa23.58■■□□□ 1.37
SYNGR3-201ENST00000248121 GLDCP23378 1020 aa23.58■■□□□ 1.37
SYNGR3-201ENST00000248121 TYK2P29597 1187 aa23.58■■□□□ 1.37
SYNGR3-201ENST00000248121 SCTRP47872 440 aa23.58■■□□□ 1.37
SYNGR3-201ENST00000248121 CSE1LP55060 971 aaKnown RBP23.58■■□□□ 1.37
SYNGR3-201ENST00000248121 CNGA3Q16281 694 aa23.58■■□□□ 1.37
SYNGR3-201ENST00000248121 RABGAP1LQ5R372 815 aa23.58■■□□□ 1.37
SYNGR3-201ENST00000248121 N4BP2L1Q5TBK1 243 aaPredicted RBP23.58■■□□□ 1.37
SYNGR3-201ENST00000248121 CNTN4Q8IWV2 1026 aa23.58■■□□□ 1.37
SYNGR3-201ENST00000248121 WFDC5Q8TCV5 224 aa23.58■■□□□ 1.37
SYNGR3-201ENST00000248121 ZSWIM3Q96MP5 696 aa23.58■■□□□ 1.37
SYNGR3-201ENST00000248121 PRKD2Q9BZL6 878 aa23.58■■□□□ 1.37
SYNGR3-201ENST00000248121 RETREG1Q9H6L5 497 aa23.58■■□□□ 1.37
SYNGR3-201ENST00000248121 TLE6Q9H808 572 aa23.58■■□□□ 1.37
SYNGR3-201ENST00000248121 MSRAQ9UJ68 235 aa23.58■■□□□ 1.37
SYNGR3-201ENST00000248121 GFRA2O00451 464 aa23.58■■□□□ 1.36
SYNGR3-201ENST00000248121 GLRA3O75311 464 aa23.58■■□□□ 1.36
SYNGR3-201ENST00000248121 UBOX5O94941 541 aa23.58■■□□□ 1.36
SYNGR3-201ENST00000248121 PRAMEF12O95522 483 aa23.58■■□□□ 1.36
SYNGR3-201ENST00000248121 BPGMP07738 259 aa23.58■■□□□ 1.36
SYNGR3-201ENST00000248121 DLG2Q15700 870 aa23.58■■□□□ 1.36
SYNGR3-201ENST00000248121 GALNTL6Q49A17 601 aa23.58■■□□□ 1.36
SYNGR3-201ENST00000248121 PDE12Q6L8Q7 609 aaKnown RBP23.58■■□□□ 1.36
SYNGR3-201ENST00000248121 KYAT3Q6YP21 454 aaKnown RBP23.58■■□□□ 1.36
SYNGR3-201ENST00000248121 VPS39Q96JC1 886 aa23.58■■□□□ 1.36
SYNGR3-201ENST00000248121 SEMA3CQ99985 751 aa23.58■■□□□ 1.36
SYNGR3-201ENST00000248121 PLCD4Q9BRC7 762 aa23.58■■□□□ 1.36
SYNGR3-201ENST00000248121 CAB39LQ9H9S4 337 aa23.58■■□□□ 1.36
SYNGR3-201ENST00000248121 SLC28A3Q9HAS3 691 aa23.58■■□□□ 1.36
SYNGR3-201ENST00000248121 NPHS2Q9NP85 383 aa23.58■■□□□ 1.36
SYNGR3-201ENST00000248121 SLC12A4Q9UP95 1085 aa23.58■■□□□ 1.36
SYNGR3-201ENST00000248121 EYSQ5T1H1 3165 aa23.57■■□□□ 1.36
SYNGR3-201ENST00000248121 E2F8A0AVK6 867 aa23.57■■□□□ 1.36
SYNGR3-201ENST00000248121 CEBPBP17676 345 aa23.57■■□□□ 1.36
SYNGR3-201ENST00000248121 MAGEA9P43362 315 aa23.57■■□□□ 1.36
SYNGR3-201ENST00000248121 IRX4P78413 519 aa23.57■■□□□ 1.36
SYNGR3-201ENST00000248121 CBX2Q14781 532 aaPredicted RBP23.57■■□□□ 1.36
SYNGR3-201ENST00000248121 DUSP6Q16828 381 aa23.57■■□□□ 1.36
SYNGR3-201ENST00000248121 FSCBQ5H9T9 825 aa23.57■■□□□ 1.36
SYNGR3-201ENST00000248121 TMC5Q6UXY8 1006 aa23.57■■□□□ 1.36
SYNGR3-201ENST00000248121 ZC3HC1Q86WB0 502 aaKnown RBP23.57■■□□□ 1.36
SYNGR3-201ENST00000248121 CMTM8Q8IZV2 173 aa23.57■■□□□ 1.36
SYNGR3-201ENST00000248121 ZNF358Q9NW07 568 aa23.57■■□□□ 1.36
SYNGR3-201ENST00000248121 DCDC2Q9UHG0 476 aa23.57■■□□□ 1.36
SYNGR3-201ENST00000248121 LOC285095A0A1B0GVY8 99 aa23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 PLIN3O60664 434 aa23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 TBL1XO60907 577 aa23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 CLDN11O75508 207 aa23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 IL1BP01584 269 aa23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 HNRNPA1P09651 372 aaKnown RBP eCLIP23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 ATXN1LP0C7T5 689 aaKnown RBP23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 NEFHP12036 1026 aa23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 SERPINB8P50452 374 aa23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 SERPINH1P50454 418 aaKnown RBP23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 CSRP3P50461 194 aa23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 SEPT6Q14141 434 aa23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 CXorf57Q6NSI4 855 aaKnown RBP23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 DENND6AQ8IWF6 608 aa23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 RFWD2Q8NHY2 731 aa23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 SH3RF2Q8TEC5 729 aa23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 POLR1EQ9GZS1 481 aaKnown RBP23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 ACTR5Q9H9F9 607 aaPredicted RBP23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 HAUS2Q9NVX0 235 aa23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 AHSGP02765 367 aa23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 BST1Q10588 318 aa23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 NUDCD3Q8IVD9 361 aa23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 CNPY4Q8N129 248 aa23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 PLD6Q8N2A8 252 aaKnown RBP23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 ITFG1Q8TB96 612 aa23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 USP13Q92995 863 aaPredicted RBP23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 ZNF599Q96NL3 588 aa23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 ZDHHC7Q9NXF8 308 aa23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 PLK2Q9NYY3 685 aa23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 TMEM216Q9P0N5 145 aa23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 SH3BP1Q9Y3L3 701 aa23.56■■□□□ 1.36
SYNGR3-201ENST00000248121 A0A1B0GVM2 712 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 TCAF2A6NFQ2 919 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 TIMM44O43615 452 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 XYLBO75191 536 aa23.55■■□□□ 1.36
SYNGR3-201ENST00000248121 KCNC3Q14003 757 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms