RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Mtx3D3YTP3 312 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Vmn2r17E9PYF5 849 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Psmc3O88685 442 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 TxnP10639 105 aaKnown RBP13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Mup5P11591 180 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Ppp3cbP48453 525 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 GemP55041 295 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 ArsiQ32KI9 573 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Cd300lfQ6SJQ7 337 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Olfr1037Q7TR84 321 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Olfr295Q7TS08 309 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Actr5Q80US4 605 aaKnown RBP13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Gabra5Q8BHJ7 463 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Atp6v1g3Q8BMC1 118 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Sik2Q8CFH6 931 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Lims2Q91XD2 341 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 DeraQ91YP3 318 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Rnf31Q924T7 1066 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Smim11aQ99J19 55 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 GatbQ99JT1 557 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Syvn1Q9DBY1 612 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Maged2Q9ER67 616 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Arid3bQ9Z1N7 568 aa13.03□□□□□ -0.32
Nup88-203ENSMUST00000108531 Ptchd4B9EKX1 904 aa13.02□□□□□ -0.32
Nup88-203ENSMUST00000108531 Vmn2r14E9Q759 848 aa13.02□□□□□ -0.32
Nup88-203ENSMUST00000108531 Zbtb10E9Q8X5 861 aa13.02□□□□□ -0.32
Nup88-203ENSMUST00000108531 Vmn2r5K7N788 911 aa13.02□□□□□ -0.32
Nup88-203ENSMUST00000108531 Fitm2P59266 262 aa13.02□□□□□ -0.32
Nup88-203ENSMUST00000108531 Tial1P70318 392 aaKnown RBP13.02□□□□□ -0.32
Nup88-203ENSMUST00000108531 Adra1dP97714 562 aa13.02□□□□□ -0.32
Nup88-203ENSMUST00000108531 Fam117bQ3U3E2 584 aa13.02□□□□□ -0.32
Nup88-203ENSMUST00000108531 Nr1h2Q60644 446 aa13.02□□□□□ -0.32
Nup88-203ENSMUST00000108531 Krt32Q62168 407 aa13.02□□□□□ -0.32
Nup88-203ENSMUST00000108531 Brsk2Q69Z98 735 aa13.02□□□□□ -0.32
Nup88-203ENSMUST00000108531 Nacc1Q7TSZ8 514 aa13.02□□□□□ -0.32
Nup88-203ENSMUST00000108531 4930503B20RikQ80ZP0 234 aa13.02□□□□□ -0.32
Nup88-203ENSMUST00000108531 Itpk1Q8BYN3 419 aa13.02□□□□□ -0.32
Nup88-203ENSMUST00000108531 Ccdc90bQ8C3X2 256 aa13.02□□□□□ -0.32
Nup88-203ENSMUST00000108531 PvrQ8K094 408 aa13.02□□□□□ -0.32
Nup88-203ENSMUST00000108531 Eva1bQ8K2Y3 164 aa13.02□□□□□ -0.32
Nup88-203ENSMUST00000108531 Nsl1Q8K305 281 aa13.02□□□□□ -0.32
Nup88-203ENSMUST00000108531 Nmd3Q99L48 503 aaKnown RBP13.02□□□□□ -0.32
Nup88-203ENSMUST00000108531 Neurl2Q9D0S4 285 aa13.02□□□□□ -0.32
Nup88-203ENSMUST00000108531 Hormad1Q9D5T7 392 aa13.02□□□□□ -0.32
Nup88-203ENSMUST00000108531 ApipQ9WVQ5 241 aa13.02□□□□□ -0.32
Nup88-203ENSMUST00000108531 Gm5485A0A1D5RM98 91 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Gm5751A2AHC8 147 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Ssxb8B1AY40 170 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Vmn2r24D3YUI0 854 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Gm21293E9Q4G9 266 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Gm2832F7AEC7 200 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Sema3aO08665 772 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 EgfP01132 1217 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Rb1P13405 921 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Sult1e1P49891 295 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Adcyap1r1P70205 496 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Tmem207P86045 143 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Muc1Q02496 630 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Treml2Q2LA85 329 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Col28a1Q2UY11 1141 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Pik3r6Q3U6Q4 756 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Fam35aQ3UEN2 891 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Rbm44Q3V089 1013 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Fam160a1Q505K2 1081 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Smarcd1Q61466 515 aaKnown RBP13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Ssxb3Q6XAS4 170 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Olfr867Q7TRF3 331 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Fam181bQ80VF6 417 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Kank2Q8BX02 843 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Bend5Q8C6D4 421 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Lrrc56Q8K375 552 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Vps39Q8R5L3 886 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 PclafQ9CQX4 110 aaKnown RBP13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 EtfbQ9DCW4 255 aaKnown RBP13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Trim54Q9ERP3 366 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Stk19Q9JHN8 254 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Cngb3Q9JJZ9 694 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Nrf1Q9WU00 503 aa13.02□□□□□ -0.33
Nup88-203ENSMUST00000108531 Dock1Q8BUR4 1865 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 LctF8VPT3 1931 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Gm6509A0A0J9YUV1 481 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Gm44511A0A0N4SW10 223 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Cyp2b13A6H6J2 491 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Supt3B0QZW4 406 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Gm8113E0CXS8 587 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Gm6351K9J7D1 481 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Rgs2O08849 211 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Cd151O35566 253 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Apobec1P51908 229 aaKnown RBP13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Gsdmc2Q2KHK6 480 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Lsmem1Q3UQS2 128 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Gpr139Q80UC8 345 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Gsdmc3Q8CB12 480 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Ssh3Q8K330 649 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Rab15Q8K386 212 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Wnt9aQ8R5M2 365 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Rxfp2Q91ZZ5 737 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Mat2bQ99LB6 334 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Tomm70Q9CZW5 611 aa13.01□□□□□ -0.33
Nup88-203ENSMUST00000108531 Cdyl2Q9D5D8 503 aa13.01□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 38 ms