RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Ighg3A0A1Y7VJN6 399 aa17.02■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Tnnc2P20801 160 aa17.02■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Krt26Q3TRJ4 462 aa17.02■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Gucy2gQ6TL19 1100 aa17.02■□□□□ 0.32
Ctcf-201ENSMUST00000005841 4933402J07RikQ8BHX0 270 aa17.02■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Zfp398Q8BV16 643 aa17.02■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Bend5Q8C6D4 421 aa17.02■□□□□ 0.32
Ctcf-201ENSMUST00000005841 ClmpQ8R373 373 aa17.02■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Ddx50Q99MJ9 734 aaKnown RBP17.02■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Shmt2Q9CZN7 504 aaKnown RBP17.02■□□□□ 0.32
Ctcf-201ENSMUST00000005841 CtsrQ9JIA9 334 aa17.02■□□□□ 0.32
Ctcf-201ENSMUST00000005841 SqorQ9R112 450 aa17.02■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Cpxm1Q9Z100 722 aa17.02■□□□□ 0.32
Ctcf-201ENSMUST00000005841 Gm10424A0A0J9YVD0 481 aa17.02■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Zbed5B2RPU8 756 aa17.02■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Serpina3iD3Z450 408 aa17.02■□□□□ 0.31
Ctcf-201ENSMUST00000005841 4930426L09RikE9Q0N7 123 aa17.02■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Gm7535F7CXE4 302 aa17.02■□□□□ 0.31
Ctcf-201ENSMUST00000005841 F830016B08RikG3UWE2 416 aa17.02■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Gm7971J3QMM8 481 aa17.02■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Serpinb9eO08806 377 aa17.02■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Faf1P54731 649 aa17.02■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Atp5jP97450 108 aa17.02■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Samd12Q0VE29 161 aa17.02■□□□□ 0.31
Ctcf-201ENSMUST00000005841 TceancQ3US16 359 aa17.02■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Bhlha9Q5RJB0 231 aa17.02■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Prl3a1Q78Y73 227 aa17.02■□□□□ 0.31
Ctcf-201ENSMUST00000005841 DdnQ80TS7 710 aa17.02■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Nrde2Q80XC6 1172 aa17.02■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Dnajb13Q80Y75 316 aa17.02■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Siglec10Q80ZE3 688 aa17.02■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Cxcr1Q810W6 351 aa17.02■□□□□ 0.31
Ctcf-201ENSMUST00000005841 SowahaQ8BLS7 548 aa17.02■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Snx17Q8BVL3 470 aa17.02■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Acsm2Q8K0L3 575 aa17.02■□□□□ 0.31
Ctcf-201ENSMUST00000005841 HnmtQ91VF2 295 aa17.02■□□□□ 0.31
Ctcf-201ENSMUST00000005841 TrilQ9DBY4 809 aa17.02■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Wdr49A0A0N4SUK7 710 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Fbrsl1E9Q9T0 1031 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Gm44G3UW88 330 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Ifrd1P19182 449 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Ptchd3Q0EEE2 906 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 StimateQ3UF25 288 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Nat9Q3UG98 241 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Esrp1Q3US41 680 aaKnown RBP17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 EfsQ64355 560 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 CapslQ6P8Y1 208 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Olfr1057Q7TR75 315 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Sfr1Q8BP27 319 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Usp43Q8BUM9 1132 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Camk1dQ8BW96 385 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Pgm5Q8BZF8 567 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Vmn1r198Q8R263 300 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Map3k14Q9WUL6 942 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Mageb2A2AHM0 380 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Lrrc73B2RWC4 316 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Itga3Q62470 1053 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 HjurpQ6PG16 667 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Zdhhc3Q8R173 299 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Slc15a4Q91W98 574 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Prmt3Q922H1 532 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 GOLGA7BQ9D428 167 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Kctd4Q9D7X1 259 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 RhojQ9ER71 214 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Nectin1Q9JKF6 515 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Morf4l2Q9R0Q4 288 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Arhgef10lA2AWP8 1280 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 GclmO09172 274 aaKnown RBP17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Smad1P70340 465 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Cyp4f37Q3V1F1 546 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Deup1Q7M6Y5 601 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Slc4a7Q8BTY2 1034 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Stx16Q8BVI5 326 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Sept8Q8CHH9 429 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Gramd1aQ8VEF1 722 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Olfr395Q8VGR3 312 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 HnrnprQ8VHM5 632 aaKnown RBP17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Gorasp1Q91X51 446 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Cyp4f16Q99N17 524 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Cog8Q9JJA2 640 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Ly6iQ9WU67 134 aa17.01■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Plxna4Q80UG2 1893 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Gm6509A0A0J9YUV1 481 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Slc43a3A2AVZ9 502 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Gm6351K9J7D1 481 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Psma3O70435 255 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Camk4P08414 469 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Xrra1Q3U3V8 786 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Mocs1Q5RKZ7 636 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Znf148Q61624 794 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Lpcat4Q6NVG1 524 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Cnpy4Q8BQ47 245 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Dis3lQ8C0S1 1053 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 NcaphQ8C156 731 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Hid1Q8R1F6 788 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Tmem98Q91X86 226 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Vangl2Q91ZD4 521 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Oxct2aQ9JJN4 520 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Mpp6Q9JLB0 553 aa17■□□□□ 0.31
Ctcf-201ENSMUST00000005841 Rai2Q9QVY8 529 aa17■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms