RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 RGSL1A5PLK6 1076 aa17■□□□□ 0.31
PHGDH-223ENST00000641597 M0QZ92 97 aa17■□□□□ 0.31
PHGDH-223ENST00000641597 CACNG3O60359 315 aa17■□□□□ 0.31
PHGDH-223ENST00000641597 IGLV3-25P01717 112 aa17■□□□□ 0.31
PHGDH-223ENST00000641597 ADRA1AP35348 466 aa17■□□□□ 0.31
PHGDH-223ENST00000641597 GRIK1P39086 918 aa17■□□□□ 0.31
PHGDH-223ENST00000641597 CYLC2Q14093 348 aaPredicted RBP17■□□□□ 0.31
PHGDH-223ENST00000641597 TRIM67Q6ZTA4 783 aa17■□□□□ 0.31
PHGDH-223ENST00000641597 LILRA2Q8N149 483 aa17■□□□□ 0.31
PHGDH-223ENST00000641597 ANKRD49Q8WVL7 239 aa17■□□□□ 0.31
PHGDH-223ENST00000641597 PPP2R3CQ969Q6 453 aa17■□□□□ 0.31
PHGDH-223ENST00000641597 PKMYT1Q99640 499 aa17■□□□□ 0.31
PHGDH-223ENST00000641597 IL12RB2Q99665 862 aa17■□□□□ 0.31
PHGDH-223ENST00000641597 SENP6Q9GZR1 1112 aaPredicted RBP17■□□□□ 0.31
PHGDH-223ENST00000641597 FAM96AQ9H5X1 160 aa17■□□□□ 0.31
PHGDH-223ENST00000641597 NOL6Q9H6R4 1146 aaKnown RBP17■□□□□ 0.31
PHGDH-223ENST00000641597 PADI3Q9ULW8 664 aa17■□□□□ 0.31
PHGDH-223ENST00000641597 TRPV2Q9Y5S1 764 aa17■□□□□ 0.31
PHGDH-223ENST00000641597 HS3ST4Q9Y661 456 aa17■□□□□ 0.31
PHGDH-223ENST00000641597 ATP6AP2A0A1C7CYW4 349 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 A0A1W2PQH9 124 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 KCNU1A8MYU2 1149 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 ATP6AP2O75787 350 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 TBX18O95935 607 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 HAPLN1P10915 354 aaPredicted RBP16.99■□□□□ 0.31
PHGDH-223ENST00000641597 CCNCP24863 283 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 PPARGP37231 505 aaPredicted RBP16.99■□□□□ 0.31
PHGDH-223ENST00000641597 KCNC1P48547 511 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 C1QTNF8P60827 252 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 ITKQ08881 620 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 EIF4EBP2Q13542 120 aaPredicted RBP16.99■□□□□ 0.31
PHGDH-223ENST00000641597 SDCCAG8Q86SQ7 713 aaPredicted RBP16.99■□□□□ 0.31
PHGDH-223ENST00000641597 BHLHE22Q8NFJ8 381 aaPredicted RBP16.99■□□□□ 0.31
PHGDH-223ENST00000641597 TSNARE1Q96NA8 513 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 FCRL5Q96RD9 977 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 ZNF385DQ9H6B1 395 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 COPS7BQ9H9Q2 264 aaPredicted RBP16.99■□□□□ 0.31
PHGDH-223ENST00000641597 PAPOLBQ9NRJ5 636 aaKnown RBP16.99■□□□□ 0.31
PHGDH-223ENST00000641597 GMPR2Q9P2T1 348 aaKnown RBP16.99■□□□□ 0.31
PHGDH-223ENST00000641597 FBXO5Q9UKT4 447 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 CDYLQ9Y232 598 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 CNTN5O94779 1100 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 ODC1P11926 461 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 THPOP40225 353 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 WNT3AP56704 352 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 SLC10A7Q0GE19 358 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 PRKAA1Q13131 559 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 FRG1Q14331 258 aaKnown RBP16.99■□□□□ 0.31
PHGDH-223ENST00000641597 ZNF423Q2M1K9 1284 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 MMEL1Q495T6 779 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 BTBD8Q5XKL5 378 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 OVOS1Q6IE37 1185 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 LINC00523Q86TU6 105 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 PIM3Q86V86 326 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 CIR1Q86X95 450 aaPredicted RBP16.99■□□□□ 0.31
PHGDH-223ENST00000641597 PPHLN1Q8NEY8 458 aaKnown RBP16.99■□□□□ 0.31
PHGDH-223ENST00000641597 HMGCLL1Q8TB92 370 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 KLHL32Q96NJ5 620 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 ZCWPW1Q9H0M4 648 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 TREX1Q9NSU2 369 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 ARHGEF38Q9NXL2 777 aa16.99■□□□□ 0.31
PHGDH-223ENST00000641597 AAR2Q9Y312 384 aaKnown RBP16.99■□□□□ 0.31
PHGDH-223ENST00000641597 TCAF2A6NFQ2 919 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 MATN3O15232 486 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 SOAT2O75908 522 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 THRAP10827 490 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 ARSDP51689 593 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 HNRNPDQ14103 355 aaKnown RBP16.98■□□□□ 0.31
PHGDH-223ENST00000641597 FLOT2Q14254 428 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 TLR1Q15399 786 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 DDR2Q16832 855 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 METTL21CQ5VZV1 264 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 ADGRG6Q86SQ4 1221 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 TTC9BQ8N6N2 239 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 SREK1Q8WXA9 508 aaKnown RBP16.98■□□□□ 0.31
PHGDH-223ENST00000641597 SLC45A3Q96JT2 553 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 GBP5Q96PP8 586 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 NR1H4Q96RI1 486 aaPredicted RBP16.98■□□□□ 0.31
PHGDH-223ENST00000641597 WDR41Q9HAD4 459 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 NT5MQ9NPB1 228 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 IGSF5Q9NSI5 407 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 STK39Q9UEW8 545 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 E9PAM4 449 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 SDHDO14521 159 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 OR6B1O95007 311 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 PGM3O95394 542 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 UQCRBP14927 111 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 ALDH1A3P47895 512 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 DSC2Q02487 901 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 TRIM32Q13049 653 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 GSTA3Q16772 222 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 ALFQ53S48 1182 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 PIGGQ5H8A4 983 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 PIK3R6Q5UE93 754 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 CLEC6AQ6EIG7 209 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 NEPROQ6NW34 567 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 TAF2Q6P1X5 1199 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 RANBP10Q6VN20 620 aa16.98■□□□□ 0.31
PHGDH-223ENST00000641597 BNC2Q6ZN30 1099 aaPredicted RBP16.98■□□□□ 0.31
PHGDH-223ENST00000641597 ACAD11Q709F0 780 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms