RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 MAF1Q9H063 256 aa14.19□□□□□ -0.14
CACNA1A-228ENST00000636610 OSBPL2Q9H1P3 480 aa14.19□□□□□ -0.14
CACNA1A-228ENST00000636610 ADAM28Q9UKQ2 775 aa14.19□□□□□ -0.14
CACNA1A-228ENST00000636610 KCTD3Q9Y597 815 aa14.19□□□□□ -0.14
CACNA1A-228ENST00000636610 COL1A2P08123 1366 aa14.18□□□□□ -0.14
CACNA1A-228ENST00000636610 CLPTM1O96005 669 aa14.18□□□□□ -0.14
CACNA1A-228ENST00000636610 ME2P23368 584 aa14.18□□□□□ -0.14
CACNA1A-228ENST00000636610 CALRP27797 417 aaKnown RBP14.18□□□□□ -0.14
CACNA1A-228ENST00000636610 RAB10P61026 200 aa14.18□□□□□ -0.14
CACNA1A-228ENST00000636610 PRKAA1Q13131 559 aa14.18□□□□□ -0.14
CACNA1A-228ENST00000636610 SEMA3BQ13214 749 aa14.18□□□□□ -0.14
CACNA1A-228ENST00000636610 TIGD5Q53EQ6 642 aa14.18□□□□□ -0.14
CACNA1A-228ENST00000636610 C16orf89Q6UX73 402 aa14.18□□□□□ -0.14
CACNA1A-228ENST00000636610 DQX1Q8TE96 717 aaKnown RBP14.18□□□□□ -0.14
CACNA1A-228ENST00000636610 NAT14Q8WUY8 206 aa14.18□□□□□ -0.14
CACNA1A-228ENST00000636610 ABHD16BQ9H3Z7 469 aa14.18□□□□□ -0.14
CACNA1A-228ENST00000636610 FAM96AQ9H5X1 160 aa14.18□□□□□ -0.14
CACNA1A-228ENST00000636610 LRRC14BA6NHZ5 514 aa14.18□□□□□ -0.14
CACNA1A-228ENST00000636610 CCDC166P0CW27 439 aa14.18□□□□□ -0.14
CACNA1A-228ENST00000636610 WARSP23381 471 aaKnown RBP14.18□□□□□ -0.14
CACNA1A-228ENST00000636610 RPL34P49207 117 aaKnown RBP14.18□□□□□ -0.14
CACNA1A-228ENST00000636610 NAB1Q13506 487 aa14.18□□□□□ -0.14
CACNA1A-228ENST00000636610 HNRNPDQ14103 355 aaKnown RBP14.18□□□□□ -0.14
CACNA1A-228ENST00000636610 PIGGQ5H8A4 983 aa14.18□□□□□ -0.14
CACNA1A-228ENST00000636610 RARS2Q5T160 578 aaKnown RBP14.18□□□□□ -0.14
CACNA1A-228ENST00000636610 PKN3Q6P5Z2 889 aa14.18□□□□□ -0.14
CACNA1A-228ENST00000636610 SCN4BQ8IWT1 228 aa14.18□□□□□ -0.14
CACNA1A-228ENST00000636610 MYO1HQ8N1T3 1032 aa14.18□□□□□ -0.14
CACNA1A-228ENST00000636610 METTL25Q8N6Q8 603 aa14.18□□□□□ -0.14
CACNA1A-228ENST00000636610 LRTOMTQ8WZ04 291 aa14.18□□□□□ -0.14
CACNA1A-228ENST00000636610 OLFM1Q99784 485 aa14.18□□□□□ -0.14
CACNA1A-228ENST00000636610 LIN28AQ9H9Z2 209 aaKnown RBP14.18□□□□□ -0.14
CACNA1A-228ENST00000636610 EFCAB1Q9HAE3 211 aa14.18□□□□□ -0.14
CACNA1A-228ENST00000636610 TCAF2A6NFQ2 919 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 RRN3P2A6NIE6 340 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 TMEM114B3SHH9 223 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 GPC4O75487 556 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 HLA-DQB2P05538 268 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 NPY2RP49146 381 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 PRAMEP78395 509 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 GALNT2Q10471 571 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 NADK2Q4G0N4 442 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 KDM1BQ8NB78 822 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 OR52K2Q8NGK3 314 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 STYXQ8WUJ0 223 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 PDCD6IPQ8WUM4 868 aaKnown RBP14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 BRI3BPQ8WY22 251 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 HDAC11Q96DB2 347 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 LRCH3Q96II8 777 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 B3GALT6Q96L58 329 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 CIB1Q99828 191 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 FLRT1Q9NZU1 646 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 TSR3Q9UJK0 312 aaKnown RBP14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 DSEQ9UL01 958 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 PAGE1O75459 146 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 CABYRO75952 493 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 ATP5BP06576 529 aaKnown RBP14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 UGT1A6P19224 532 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 C14orf80Q86SX3 495 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 RP9Q8TA86 221 aaKnown RBP14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 ANKRD49Q8WVL7 239 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 FAM192AQ9GZU8 254 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 ALG9Q9H6U8 611 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 ZBTB26Q9HCK0 441 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 FBXO5Q9UKT4 447 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 A0A0G2JMZ2 1700 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 LRRC37A2A6NM11 1700 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 FAM149AA5PLN7 773 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 SUPT7LO94864 414 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 ITGB1P05556 798 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 HMBSP08397 361 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 CKMT2P17540 419 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 CBLBQ13191 982 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 OGFRL1Q5TC84 451 aaPredicted RBP14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 ADGRG6Q86SQ4 1221 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 LRRTM3Q86VH5 581 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 TOP6BLQ8N6T0 577 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 FCRL2Q96LA5 508 aaPredicted RBP14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 ZNF512Q96ME7 567 aaPredicted RBP14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 NT5MQ9NPB1 228 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 ARHGEF38Q9NXL2 777 aa14.17□□□□□ -0.14
CACNA1A-228ENST00000636610 SDHDO14521 159 aa14.16□□□□□ -0.14
CACNA1A-228ENST00000636610 SEC24DO94855 1032 aaPredicted RBP14.16□□□□□ -0.14
CACNA1A-228ENST00000636610 THP07101 528 aa14.16□□□□□ -0.14
CACNA1A-228ENST00000636610 KCNE1P15382 129 aa14.16□□□□□ -0.14
CACNA1A-228ENST00000636610 KCNC1P48547 511 aa14.16□□□□□ -0.14
CACNA1A-228ENST00000636610 CSE1LP55060 971 aaKnown RBP14.16□□□□□ -0.14
CACNA1A-228ENST00000636610 MYBPC1Q00872 1141 aa14.16□□□□□ -0.14
CACNA1A-228ENST00000636610 ADGRE1Q14246 886 aa14.16□□□□□ -0.14
CACNA1A-228ENST00000636610 MTX3Q5HYI7 312 aa14.16□□□□□ -0.14
CACNA1A-228ENST00000636610 C9orf131Q5VYM1 1079 aa14.16□□□□□ -0.14
CACNA1A-228ENST00000636610 MRPL1Q9BYD6 325 aaKnown RBP14.16□□□□□ -0.14
CACNA1A-228ENST00000636610 V9GYQ6 96 aa14.16□□□□□ -0.14
CACNA1A-228ENST00000636610 TFAP2AP05549 437 aa14.16□□□□□ -0.14
CACNA1A-228ENST00000636610 SMIM18P0DKX4 95 aa14.16□□□□□ -0.14
CACNA1A-228ENST00000636610 SCNN1AP37088 669 aa14.16□□□□□ -0.14
CACNA1A-228ENST00000636610 PSEN2P49810 448 aa14.16□□□□□ -0.14
CACNA1A-228ENST00000636610 PSME3P61289 254 aa14.16□□□□□ -0.14
CACNA1A-228ENST00000636610 YBX1P67809 324 aaKnown RBP14.16□□□□□ -0.14
CACNA1A-228ENST00000636610 DBN1Q16643 649 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms