RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 CDCP2Q5VXM1 449 aa13.73□□□□□ -0.21
SOX2-OT-241ENST00000626948 KIAA1161Q6NSJ0 714 aa13.73□□□□□ -0.21
SOX2-OT-241ENST00000626948 CYP4V2Q6ZWL3 525 aaPredicted RBP13.73□□□□□ -0.21
SOX2-OT-241ENST00000626948 TMC6Q7Z403 805 aa13.73□□□□□ -0.21
SOX2-OT-241ENST00000626948 PTAR1Q7Z6K3 402 aaPredicted RBP13.73□□□□□ -0.21
SOX2-OT-241ENST00000626948 SLFN11Q7Z7L1 901 aa13.73□□□□□ -0.21
SOX2-OT-241ENST00000626948 RTL3Q8N8U3 475 aaKnown RBP13.73□□□□□ -0.21
SOX2-OT-241ENST00000626948 CENPTQ96BT3 561 aa13.73□□□□□ -0.21
SOX2-OT-241ENST00000626948 PPP1R16AQ96I34 528 aa13.73□□□□□ -0.21
SOX2-OT-241ENST00000626948 APOLD1Q96LR9 279 aa13.73□□□□□ -0.21
SOX2-OT-241ENST00000626948 NSMCE3Q96MG7 304 aa13.73□□□□□ -0.21
SOX2-OT-241ENST00000626948 MCEEQ96PE7 176 aa13.73□□□□□ -0.21
SOX2-OT-241ENST00000626948 LENG8Q96PV6 779 aaPredicted RBP13.73□□□□□ -0.21
SOX2-OT-241ENST00000626948 SELENOOQ9BVL4 669 aa13.73□□□□□ -0.21
SOX2-OT-241ENST00000626948 GPATCH2LQ9NWQ4 482 aa13.73□□□□□ -0.21
SOX2-OT-241ENST00000626948 LHX3Q9UBR4 397 aa13.73□□□□□ -0.21
SOX2-OT-241ENST00000626948 ATMQ13315 3056 aa13.73□□□□□ -0.21
SOX2-OT-241ENST00000626948 PTPRQQ9UMZ3 2332 aa13.73□□□□□ -0.21
SOX2-OT-241ENST00000626948 A0A1W2PNU3 283 aaPredicted RBP13.72□□□□□ -0.21
SOX2-OT-241ENST00000626948 WASH4PA8MWX3 477 aa13.72□□□□□ -0.21
SOX2-OT-241ENST00000626948 K7ESM1 405 aa13.72□□□□□ -0.21
SOX2-OT-241ENST00000626948 SCAMP1O15126 338 aa13.72□□□□□ -0.21
SOX2-OT-241ENST00000626948 CSF2P04141 144 aa13.72□□□□□ -0.21
SOX2-OT-241ENST00000626948 CKMT1AP12532 417 aa13.72□□□□□ -0.21
SOX2-OT-241ENST00000626948 NME1P15531 152 aaKnown RBP13.72□□□□□ -0.21
SOX2-OT-241ENST00000626948 TIMP2P16035 220 aa13.72□□□□□ -0.21
SOX2-OT-241ENST00000626948 IGFALSP35858 605 aa13.72□□□□□ -0.21
SOX2-OT-241ENST00000626948 SEMG2Q02383 582 aa13.72□□□□□ -0.21
SOX2-OT-241ENST00000626948 CYTH1Q15438 398 aa13.72□□□□□ -0.21
SOX2-OT-241ENST00000626948 ZSWIM9Q86XI8 627 aa13.72□□□□□ -0.21
SOX2-OT-241ENST00000626948 MCOLN2Q8IZK6 566 aa13.72□□□□□ -0.21
SOX2-OT-241ENST00000626948 RBFAQ8N0V3 343 aa13.72□□□□□ -0.21
SOX2-OT-241ENST00000626948 CACTIN-AS1Q8N1I8 211 aa13.72□□□□□ -0.21
SOX2-OT-241ENST00000626948 ZNF548Q8NEK5 533 aaPredicted RBP13.72□□□□□ -0.21
SOX2-OT-241ENST00000626948 NEK11Q8NG66 645 aa13.72□□□□□ -0.21
SOX2-OT-241ENST00000626948 FEM1CQ96JP0 617 aa13.72□□□□□ -0.21
SOX2-OT-241ENST00000626948 PEBP4Q96S96 227 aa13.72□□□□□ -0.21
SOX2-OT-241ENST00000626948 TRIM7Q9C029 511 aa13.72□□□□□ -0.21
SOX2-OT-241ENST00000626948 NRSN2Q9GZP1 204 aa13.72□□□□□ -0.21
SOX2-OT-241ENST00000626948 RETREG1Q9H6L5 497 aa13.72□□□□□ -0.21
SOX2-OT-241ENST00000626948 PDFQ9HBH1 243 aa13.72□□□□□ -0.21
SOX2-OT-241ENST00000626948 MBNL1Q9NR56 388 aaKnown RBP13.72□□□□□ -0.21
SOX2-OT-241ENST00000626948 DNAJC28Q9NX36 388 aa13.72□□□□□ -0.21
SOX2-OT-241ENST00000626948 TMEM63CQ9P1W3 806 aa13.72□□□□□ -0.21
SOX2-OT-241ENST00000626948 DAAM1Q9Y4D1 1078 aa13.72□□□□□ -0.21
SOX2-OT-241ENST00000626948 KALRNO60229 2985 aa13.72□□□□□ -0.21
SOX2-OT-241ENST00000626948 LRP4O75096 1905 aa13.72□□□□□ -0.21
SOX2-OT-241ENST00000626948 RP1P56715 2156 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 RASA4BC9J798 803 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 ATMINO43313 823 aaPredicted RBP13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 RASA4O43374 803 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 TSPAN6O43657 245 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 BUB1O43683 1085 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 GCATO75600 419 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 POP4O95707 220 aaKnown RBP13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 MT-CO3P00414 261 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 CALB1P05937 261 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 CDK4P11802 303 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 EPHB2P29323 1055 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 HNF1BP35680 557 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 ETFBP38117 255 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 EIF2S3P41091 472 aaKnown RBP13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 RGRP47804 291 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 CCDC15Q0P6D6 951 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 SERINC3Q13530 473 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 PDE1CQ14123 709 aaPredicted RBP13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 KCTD16Q68DU8 428 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 ACAD10Q6JQN1 1059 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 SCYL2Q6P3W7 929 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 UMODL1-AS1Q8N2C9 162 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 RYBPQ8N488 228 aaPredicted RBP13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 TP53I13Q8NBR0 393 aaPredicted RBP13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 ASB12Q8WXK4 309 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 NXPE2Q96DL1 559 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 IFT43Q96FT9 208 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 EXOC2Q96KP1 924 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 DCBLD2Q96PD2 775 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 TTYH3Q9C0H2 523 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 LRRC19Q9H756 370 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 ANO10Q9NW15 660 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 NLGN3Q9NZ94 848 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 CLCA2Q9UQC9 943 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 RAI2Q9Y5P3 530 aa13.71□□□□□ -0.21
SOX2-OT-241ENST00000626948 J3KR12 359 aa13.7□□□□□ -0.22
SOX2-OT-241ENST00000626948 CREB3O43889 395 aa13.7□□□□□ -0.22
SOX2-OT-241ENST00000626948 OPA1O60313 960 aa13.7□□□□□ -0.22
SOX2-OT-241ENST00000626948 BRINP1O60477 761 aa13.7□□□□□ -0.22
SOX2-OT-241ENST00000626948 BUB1BO60566 1050 aaPredicted RBP13.7□□□□□ -0.22
SOX2-OT-241ENST00000626948 MMP20O60882 483 aa13.7□□□□□ -0.22
SOX2-OT-241ENST00000626948 PIGNO95427 931 aa13.7□□□□□ -0.22
SOX2-OT-241ENST00000626948 CELA2BP08218 269 aaPredicted RBP13.7□□□□□ -0.22
SOX2-OT-241ENST00000626948 SNRPD1P62314 119 aaKnown RBP13.7□□□□□ -0.22
SOX2-OT-241ENST00000626948 STX1AQ16623 288 aa13.7□□□□□ -0.22
SOX2-OT-241ENST00000626948 DNAJC24Q6P3W2 148 aa13.7□□□□□ -0.22
SOX2-OT-241ENST00000626948 GDPD4Q6W3E5 623 aa13.7□□□□□ -0.22
SOX2-OT-241ENST00000626948 PARGQ86W56 976 aa13.7□□□□□ -0.22
SOX2-OT-241ENST00000626948 TP53INP2Q8IXH6 220 aa13.7□□□□□ -0.22
SOX2-OT-241ENST00000626948 AOPEPQ8N6M6 819 aa13.7□□□□□ -0.22
SOX2-OT-241ENST00000626948 FAM181AQ8N9Y4 354 aa13.7□□□□□ -0.22
SOX2-OT-241ENST00000626948 RAB7BQ96AH8 199 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms