RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 BEND7Q8N7W2 519 aaPredicted RBP11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 TMEM138Q9NPI0 162 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 FMN2Q9NZ56 1722 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 MOXD2PA6NHM9 499 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 SLC35G4P0C7Q5 338 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 CSH1P0DML2 217 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 CSH2P0DML3 217 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 CBX5P45973 191 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 CDH8P55286 799 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 RBBP4Q09028 425 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 PCID2Q5JVF3 399 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 WASHC2DQ5SRD0 308 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 FIBCD1Q8N539 461 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 HEXDCQ8WVB3 486 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 ERLEC1Q96DZ1 483 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 KCNQ5Q9NR82 932 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 PCDHGB3Q9Y5G1 929 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 KCNK1O00180 336 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 SLC28A1O00337 649 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 TPP1O14773 563 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 PTPN1P18031 435 aaKnown RBP11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 IRF8Q02556 426 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 NR1D2Q14995 579 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 XKR6Q5GH73 641 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 ZSWIM2Q8NEG5 633 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 TEX47Q8TBZ9 253 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 OR8D1Q8WZ84 308 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 ERGIC3Q9Y282 383 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 PTPRUQ92729 1446 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 LTA4HP09960 611 aaKnown RBP11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 NDUFV1P49821 464 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 UGT2B15P54855 530 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 TSC22D1Q15714 1073 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 INTS5Q6P9B9 1019 aaKnown RBP11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 REXO1L1PQ8IX06 675 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 EFCAB3Q8N7B9 438 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 SLC5A5Q92911 643 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 TATDN2Q93075 761 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 WNT8BQ93098 351 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 STX16-NPEPL1H3BU86 382 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 STX16O14662 325 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 LDOC1O95751 146 aaPredicted RBP11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 CHRNGP07510 517 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 H2AFXP16104 143 aaPredicted RBP11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 PHYKPLQ8IUZ5 450 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 DEFB106AQ8N104 65 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 DAW1Q8N136 415 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 ZCCHC9Q8N567 271 aaKnown RBP11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 A0A087WXM4 84 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 IQCMA0A1B0GVH7 501 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 CCDC182A6NF36 153 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 DCXO43602 365 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 TSPAN18Q96SJ8 248 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 RASSF1Q9NS23 344 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 FRMPD4Q14CM0 1322 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 HNRNPH1P31943 449 aaKnown RBP11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 SLC12A3P55017 1021 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 MAPK11Q15759 364 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 MAPKAPK3Q16644 382 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 AP5B1Q2VPB7 878 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 PPP3R2Q96LZ3 170 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 FERD3LQ96RJ6 166 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 CRNNQ9UBG3 495 aaPredicted RBP11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 CAPN6Q9Y6Q1 641 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 SSNA1O43805 119 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 TLL1O43897 1013 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 ELFN1P0C7U0 828 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 SLC6A2P23975 617 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 MIPP30301 263 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 EIF2B2P49770 351 aaKnown RBP11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 RARRES1P49788 294 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 ITGADQ13349 1161 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 ADAMTSL2Q86TH1 951 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 SNRNP27Q8WVK2 155 aaKnown RBP11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 BRD9Q9H8M2 597 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 CMTM6Q9NX76 183 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 COG5Q9UP83 839 aa11.26□□□□□ -0.61
CCDC144B-208ENST00000618081 RBMXL2O75526 392 aaKnown RBP11.25□□□□□ -0.61
CCDC144B-208ENST00000618081 CCDC166P0CW27 439 aa11.25□□□□□ -0.61
CCDC144B-208ENST00000618081 KELP23276 732 aa11.25□□□□□ -0.61
CCDC144B-208ENST00000618081 RPL14P50914 215 aaKnown RBP11.25□□□□□ -0.61
CCDC144B-208ENST00000618081 SPIRE1Q08AE8 756 aa11.25□□□□□ -0.61
CCDC144B-208ENST00000618081 SQLEQ14534 574 aa11.25□□□□□ -0.61
CCDC144B-208ENST00000618081 KCNS3Q9BQ31 491 aa11.25□□□□□ -0.61
CCDC144B-208ENST00000618081 ALG9Q9H6U8 611 aa11.25□□□□□ -0.61
CCDC144B-208ENST00000618081 NUDT5Q9UKK9 219 aa11.25□□□□□ -0.61
CCDC144B-208ENST00000618081 A0A0A0MRY4 1105 aa11.25□□□□□ -0.61
CCDC144B-208ENST00000618081 IRGMA1A4Y4 181 aa11.25□□□□□ -0.61
CCDC144B-208ENST00000618081 IFNGP01579 166 aa11.25□□□□□ -0.61
CCDC144B-208ENST00000618081 ACTR3P61158 418 aa11.25□□□□□ -0.61
CCDC144B-208ENST00000618081 TXNDC11Q6PKC3 985 aa11.25□□□□□ -0.61
CCDC144B-208ENST00000618081 OTOP1Q7RTM1 612 aa11.25□□□□□ -0.61
CCDC144B-208ENST00000618081 KATNAL2Q8IYT4 538 aa11.25□□□□□ -0.61
CCDC144B-208ENST00000618081 ATXN2LQ8WWM7 1075 aaKnown RBP11.25□□□□□ -0.61
CCDC144B-208ENST00000618081 SPATA13Q96N96 652 aa11.25□□□□□ -0.61
CCDC144B-208ENST00000618081 GAD1Q99259 594 aa11.25□□□□□ -0.61
CCDC144B-208ENST00000618081 NRDE2Q9H7Z3 1164 aa11.25□□□□□ -0.61
CCDC144B-208ENST00000618081 E5RJQ4 531 aa11.25□□□□□ -0.61
CCDC144B-208ENST00000618081 FDPSP14324 419 aaKnown RBP11.25□□□□□ -0.61
CCDC144B-208ENST00000618081 ST3GAL1Q11201 340 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms