RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 EFHC2Q5JST6 749 aa19.03■□□□□ 0.64
PNKP-213ENST00000599543 DNAJC24Q6P3W2 148 aa19.03■□□□□ 0.64
PNKP-213ENST00000599543 WDR59Q6PJI9 974 aa19.03■□□□□ 0.64
PNKP-213ENST00000599543 KYAT3Q6YP21 454 aaKnown RBP19.03■□□□□ 0.64
PNKP-213ENST00000599543 MON1BQ7L1V2 547 aa19.03■□□□□ 0.64
PNKP-213ENST00000599543 SLFN11Q7Z7L1 901 aa19.03■□□□□ 0.64
PNKP-213ENST00000599543 DCP2Q8IU60 420 aaKnown RBP19.03■□□□□ 0.64
PNKP-213ENST00000599543 OR4C6Q8NH72 309 aa19.03■□□□□ 0.64
PNKP-213ENST00000599543 RAB7BQ96AH8 199 aa19.03■□□□□ 0.64
PNKP-213ENST00000599543 IFT43Q96FT9 208 aa19.03■□□□□ 0.64
PNKP-213ENST00000599543 MAGEB5Q9BZ81 275 aa19.03■□□□□ 0.64
PNKP-213ENST00000599543 SCUBE2Q9NQ36 999 aa19.03■□□□□ 0.64
PNKP-213ENST00000599543 UCKL1Q9NWZ5 548 aa19.03■□□□□ 0.64
PNKP-213ENST00000599543 DNAJC28Q9NX36 388 aa19.03■□□□□ 0.64
PNKP-213ENST00000599543 AIPL1Q9NZN9 384 aa19.03■□□□□ 0.64
PNKP-213ENST00000599543 CAPN11Q9UMQ6 739 aa19.03■□□□□ 0.64
PNKP-213ENST00000599543 HS3ST3A1Q9Y663 406 aa19.03■□□□□ 0.64
PNKP-213ENST00000599543 A0A1W2PQJ5 194 aa19.02■□□□□ 0.64
PNKP-213ENST00000599543 ZSCAN5CA6NGD5 496 aaPredicted RBP19.02■□□□□ 0.64
PNKP-213ENST00000599543 SIGLEC16A6NMB1 481 aa19.02■□□□□ 0.64
PNKP-213ENST00000599543 C16orf96A6NNT2 1141 aa19.02■□□□□ 0.64
PNKP-213ENST00000599543 TSPAN6O43657 245 aa19.02■□□□□ 0.64
PNKP-213ENST00000599543 PIAS2O75928 621 aa19.02■□□□□ 0.64
PNKP-213ENST00000599543 ALPPL2P10696 532 aa19.02■□□□□ 0.64
PNKP-213ENST00000599543 TNFAIP3P21580 790 aa19.02■□□□□ 0.64
PNKP-213ENST00000599543 EPHB2P29323 1055 aa19.02■□□□□ 0.64
PNKP-213ENST00000599543 GKP32189 559 aa19.02■□□□□ 0.64
PNKP-213ENST00000599543 ZBED6P86452 979 aa19.02■□□□□ 0.64
PNKP-213ENST00000599543 C1QBPQ07021 282 aaKnown RBP19.02■□□□□ 0.64
PNKP-213ENST00000599543 FGL2Q14314 439 aa19.02■□□□□ 0.64
PNKP-213ENST00000599543 SCYL2Q6P3W7 929 aa19.02■□□□□ 0.64
PNKP-213ENST00000599543 LEKR1Q6ZMV7 388 aa19.02■□□□□ 0.64
PNKP-213ENST00000599543 PDZD3Q86UT5 571 aa19.02■□□□□ 0.64
PNKP-213ENST00000599543 VSTM4Q8IW00 320 aa19.02■□□□□ 0.64
PNKP-213ENST00000599543 ARHGEF26Q96DR7 871 aa19.02■□□□□ 0.64
PNKP-213ENST00000599543 MCEEQ96PE7 176 aa19.02■□□□□ 0.64
PNKP-213ENST00000599543 SYT11Q9BT88 431 aa19.02■□□□□ 0.64
PNKP-213ENST00000599543 OSBPL1AQ9BXW6 950 aa19.02■□□□□ 0.64
PNKP-213ENST00000599543 EDEM3Q9BZQ6 932 aa19.02■□□□□ 0.64
PNKP-213ENST00000599543 POM121BA6NF01 834 aa19.01■□□□□ 0.63
PNKP-213ENST00000599543 NEMP2A6NFY4 417 aa19.01■□□□□ 0.63
PNKP-213ENST00000599543 CCP110O43303 1012 aa19.01■□□□□ 0.63
PNKP-213ENST00000599543 BUB1O43683 1085 aa19.01■□□□□ 0.63
PNKP-213ENST00000599543 KDELR3O43731 214 aa19.01■□□□□ 0.63
PNKP-213ENST00000599543 UGT2B4P06133 528 aa19.01■□□□□ 0.63
PNKP-213ENST00000599543 CCDC172P0C7W6 258 aa19.01■□□□□ 0.63
PNKP-213ENST00000599543 DESP17661 470 aa19.01■□□□□ 0.63
PNKP-213ENST00000599543 RABIFP47224 123 aa19.01■□□□□ 0.63
PNKP-213ENST00000599543 ZNF143P52747 638 aaPredicted RBP19.01■□□□□ 0.63
PNKP-213ENST00000599543 HNRNPKP61978 463 aaKnown RBP eCLIP19.01■□□□□ 0.63
PNKP-213ENST00000599543 TDRD12Q587J7 1177 aaKnown RBP19.01■□□□□ 0.63
PNKP-213ENST00000599543 SPECC1LQ69YQ0 1117 aa19.01■□□□□ 0.63
PNKP-213ENST00000599543 TMC6Q7Z403 805 aa19.01■□□□□ 0.63
PNKP-213ENST00000599543 PYROXD2Q8N2H3 581 aa19.01■□□□□ 0.63
PNKP-213ENST00000599543 RTL3Q8N8U3 475 aaKnown RBP19.01■□□□□ 0.63
PNKP-213ENST00000599543 GDAP1L1Q96MZ0 367 aa19.01■□□□□ 0.63
PNKP-213ENST00000599543 NLGN3Q9NZ94 848 aa19.01■□□□□ 0.63
PNKP-213ENST00000599543 CLCA2Q9UQC9 943 aa19.01■□□□□ 0.63
PNKP-213ENST00000599543 LUC7L2Q9Y383 392 aaKnown RBP19.01■□□□□ 0.63
PNKP-213ENST00000599543 AK5Q9Y6K8 562 aa19.01■□□□□ 0.63
PNKP-213ENST00000599543 BAHCC1Q9P281 2608 aa19.01■□□□□ 0.63
PNKP-213ENST00000599543 IGLON5A6NGN9 336 aa19■□□□□ 0.63
PNKP-213ENST00000599543 FPGTO14772 594 aa19■□□□□ 0.63
PNKP-213ENST00000599543 RAD51BO15315 384 aa19■□□□□ 0.63
PNKP-213ENST00000599543 CREB3O43889 395 aa19■□□□□ 0.63
PNKP-213ENST00000599543 TMCC1O94876 653 aa19■□□□□ 0.63
PNKP-213ENST00000599543 POP4O95707 220 aaKnown RBP19■□□□□ 0.63
PNKP-213ENST00000599543 HOXB3P14651 431 aaPredicted RBP19■□□□□ 0.63
PNKP-213ENST00000599543 ABL2P42684 1182 aa19■□□□□ 0.63
PNKP-213ENST00000599543 E2F1Q01094 437 aa19■□□□□ 0.63
PNKP-213ENST00000599543 INSM1Q01101 510 aaPredicted RBP19■□□□□ 0.63
PNKP-213ENST00000599543 MYLK3Q32MK0 819 aa19■□□□□ 0.63
PNKP-213ENST00000599543 ZNF542PQ5EBM4 170 aa19■□□□□ 0.63
PNKP-213ENST00000599543 ATXN7L2Q5T6C5 722 aaPredicted RBP19■□□□□ 0.63
PNKP-213ENST00000599543 HGSNATQ68CP4 663 aa19■□□□□ 0.63
PNKP-213ENST00000599543 SARM1Q6SZW1 724 aa19■□□□□ 0.63
PNKP-213ENST00000599543 PARGQ86W56 976 aa19■□□□□ 0.63
PNKP-213ENST00000599543 CASKIN2Q8WXE0 1202 aa19■□□□□ 0.63
PNKP-213ENST00000599543 RFFLQ8WZ73 363 aa19■□□□□ 0.63
PNKP-213ENST00000599543 BMFQ96LC9 184 aa19■□□□□ 0.63
PNKP-213ENST00000599543 KLHL32Q96NJ5 620 aa19■□□□□ 0.63
PNKP-213ENST00000599543 DCBLD2Q96PD2 775 aa19■□□□□ 0.63
PNKP-213ENST00000599543 EPAS1Q99814 870 aa19■□□□□ 0.63
PNKP-213ENST00000599543 C1QTNF2Q9BXJ5 285 aa19■□□□□ 0.63
PNKP-213ENST00000599543 NRSN2Q9GZP1 204 aa19■□□□□ 0.63
PNKP-213ENST00000599543 GPR27Q9NS67 375 aa19■□□□□ 0.63
PNKP-213ENST00000599543 IPO11Q9UI26 975 aaKnown RBP19■□□□□ 0.63
PNKP-213ENST00000599543 GGT7Q9UJ14 662 aa19■□□□□ 0.63
PNKP-213ENST00000599543 ITM2BQ9Y287 266 aa19■□□□□ 0.63
PNKP-213ENST00000599543 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19■□□□□ 0.632e-9■■□□□ 13.4
PNKP-213ENST00000599543 FASNP49327 2511 aaKnown RBP19■□□□□ 0.63
PNKP-213ENST00000599543 A0A087WV48 116 aa18.99■□□□□ 0.63
PNKP-213ENST00000599543 SPTY2D1-AS1A0A0U1RR47 76 aa18.99■□□□□ 0.63
PNKP-213ENST00000599543 H3BM21 787 aa18.99■□□□□ 0.63
PNKP-213ENST00000599543 DDX3XO00571 662 aaKnown RBP eCLIP18.99■□□□□ 0.63
PNKP-213ENST00000599543 ATMINO43313 823 aaPredicted RBP18.99■□□□□ 0.63
PNKP-213ENST00000599543 IGSF6O95976 241 aa18.99■□□□□ 0.63
PNKP-213ENST00000599543 CKMT1AP12532 417 aa18.99■□□□□ 0.63
PNKP-213ENST00000599543 PRKCIP41743 596 aa18.99■□□□□ 0.63
PNKP-213ENST00000599543 AIF1P55008 147 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms