RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 PCDH8O95206 1070 aa20.46■□□□□ 0.87
CIRBP-239ENST00000592467 HNRNPA2B1P22626 353 aaKnown RBP20.46■□□□□ 0.87
CIRBP-239ENST00000592467 GRK6P43250 576 aa20.46■□□□□ 0.87
CIRBP-239ENST00000592467 SLC25A11Q02978 314 aaKnown RBP20.46■□□□□ 0.87
CIRBP-239ENST00000592467 STAT4Q14765 748 aa20.46■□□□□ 0.87
CIRBP-239ENST00000592467 SLC45A4Q5BKX6 768 aa20.46■□□□□ 0.87
CIRBP-239ENST00000592467 PPP6R3Q5H9R7 873 aaPredicted RBP20.46■□□□□ 0.87
CIRBP-239ENST00000592467 FBXL19Q6PCT2 694 aa20.46■□□□□ 0.87
CIRBP-239ENST00000592467 ARHGAP36Q6ZRI8 547 aa20.46■□□□□ 0.87
CIRBP-239ENST00000592467 ZNF354CQ86Y25 554 aa20.46■□□□□ 0.87
CIRBP-239ENST00000592467 GATAD2AQ86YP4 633 aa20.46■□□□□ 0.87
CIRBP-239ENST00000592467 RYBPQ8N488 228 aaPredicted RBP20.46■□□□□ 0.87
CIRBP-239ENST00000592467 CHCHD4Q8N4Q1 142 aa20.46■□□□□ 0.87
CIRBP-239ENST00000592467 PNPLA1Q8N8W4 532 aa20.46■□□□□ 0.87
CIRBP-239ENST00000592467 ADAMTS14Q8WXS8 1223 aa20.46■□□□□ 0.87
CIRBP-239ENST00000592467 GATA6Q92908 595 aa20.46■□□□□ 0.87
CIRBP-239ENST00000592467 GDAP1L1Q96MZ0 367 aa20.46■□□□□ 0.87
CIRBP-239ENST00000592467 KLHL32Q96NJ5 620 aa20.46■□□□□ 0.87
CIRBP-239ENST00000592467 DNAJC7Q99615 494 aa20.46■□□□□ 0.87
CIRBP-239ENST00000592467 MYOCQ99972 504 aa20.46■□□□□ 0.87
CIRBP-239ENST00000592467 NCAPGQ9BPX3 1015 aa20.46■□□□□ 0.87
CIRBP-239ENST00000592467 OSBPL1AQ9BXW6 950 aa20.46■□□□□ 0.87
CIRBP-239ENST00000592467 GPR27Q9NS67 375 aa20.46■□□□□ 0.87
CIRBP-239ENST00000592467 KLK13Q9UKR3 277 aa20.46■□□□□ 0.87
CIRBP-239ENST00000592467 ITM2BQ9Y287 266 aa20.46■□□□□ 0.87
CIRBP-239ENST00000592467 NEUROG3Q9Y4Z2 214 aa20.46■□□□□ 0.87
CIRBP-239ENST00000592467 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.46■□□□□ 0.87
CIRBP-239ENST00000592467 USP24Q9UPU5 2620 aa20.46■□□□□ 0.87
CIRBP-239ENST00000592467 RAD51BO15315 384 aa20.45■□□□□ 0.86
CIRBP-239ENST00000592467 TRIM16O95361 564 aa20.45■□□□□ 0.86
CIRBP-239ENST00000592467 ATXN1LP0C7T5 689 aaKnown RBP20.45■□□□□ 0.86
CIRBP-239ENST00000592467 RARAP10276 462 aa20.45■□□□□ 0.86
CIRBP-239ENST00000592467 EPHA8P29322 1005 aaPredicted RBP20.45■□□□□ 0.86
CIRBP-239ENST00000592467 ZNF135P52742 658 aaPredicted RBP20.45■□□□□ 0.86
CIRBP-239ENST00000592467 RHOAP61586 193 aa20.45■□□□□ 0.86
CIRBP-239ENST00000592467 BNIP3Q12983 259 aa20.45■□□□□ 0.86
CIRBP-239ENST00000592467 PIGHQ14442 188 aaPredicted RBP20.45■□□□□ 0.86
CIRBP-239ENST00000592467 SMTNL2Q2TAL5 461 aa20.45■□□□□ 0.86
CIRBP-239ENST00000592467 KIAA1161Q6NSJ0 714 aa20.45■□□□□ 0.86
CIRBP-239ENST00000592467 GDPD4Q6W3E5 623 aa20.45■□□□□ 0.86
CIRBP-239ENST00000592467 ABI3BPQ7Z7G0 1075 aa20.45■□□□□ 0.86
CIRBP-239ENST00000592467 VPS36Q86VN1 386 aa20.45■□□□□ 0.86
CIRBP-239ENST00000592467 RAB7BQ96AH8 199 aa20.45■□□□□ 0.86
CIRBP-239ENST00000592467 EXOC2Q96KP1 924 aa20.45■□□□□ 0.86
CIRBP-239ENST00000592467 BMFQ96LC9 184 aa20.45■□□□□ 0.86
CIRBP-239ENST00000592467 KLF6Q99612 283 aaPredicted RBP20.45■□□□□ 0.86
CIRBP-239ENST00000592467 CDC6Q99741 560 aa20.45■□□□□ 0.86
CIRBP-239ENST00000592467 NUP85Q9BW27 656 aa20.45■□□□□ 0.86
CIRBP-239ENST00000592467 C1QTNF2Q9BXJ5 285 aa20.45■□□□□ 0.86
CIRBP-239ENST00000592467 TSPY26PQ9H489 355 aa20.45■□□□□ 0.86
CIRBP-239ENST00000592467 CAAP1Q9H8G2 361 aa20.45■□□□□ 0.86
CIRBP-239ENST00000592467 ETNK2Q9NVF9 386 aa20.45■□□□□ 0.86
CIRBP-239ENST00000592467 DONSONQ9NYP3 566 aa20.45■□□□□ 0.86
CIRBP-239ENST00000592467 UBA2Q9UBT2 640 aaPredicted RBP20.45■□□□□ 0.86
CIRBP-239ENST00000592467 C1QTNF9BB2RNN3 333 aa20.44■□□□□ 0.86
CIRBP-239ENST00000592467 IGSF6O95976 241 aa20.44■□□□□ 0.86
CIRBP-239ENST00000592467 C1QTNF9P0C862 333 aa20.44■□□□□ 0.86
CIRBP-239ENST00000592467 EIF4A3P38919 411 aaKnown RBP20.44■□□□□ 0.86
CIRBP-239ENST00000592467 RGRP47804 291 aa20.44■□□□□ 0.86
CIRBP-239ENST00000592467 CLDN2P57739 230 aa20.44■□□□□ 0.86
CIRBP-239ENST00000592467 RPS21P63220 83 aaKnown RBP20.44■□□□□ 0.86
CIRBP-239ENST00000592467 BOLA3Q53S33 107 aa20.44■□□□□ 0.86
CIRBP-239ENST00000592467 CCDC122Q5T0U0 273 aa20.44■□□□□ 0.86
CIRBP-239ENST00000592467 SPECC1LQ69YQ0 1117 aa20.44■□□□□ 0.86
CIRBP-239ENST00000592467 POLNQ7Z5Q5 900 aa20.44■□□□□ 0.86
CIRBP-239ENST00000592467 CPNE8Q86YQ8 564 aa20.44■□□□□ 0.86
CIRBP-239ENST00000592467 SLC22A18ASQ8N1D0 253 aa20.44■□□□□ 0.86
CIRBP-239ENST00000592467 OR13H1Q8NG92 308 aa20.44■□□□□ 0.86
CIRBP-239ENST00000592467 TSC1Q92574 1164 aa20.44■□□□□ 0.86
CIRBP-239ENST00000592467 KLHDC7BQ96G42 594 aa20.44■□□□□ 0.86
CIRBP-239ENST00000592467 FEM1CQ96JP0 617 aa20.44■□□□□ 0.86
CIRBP-239ENST00000592467 SLC17A9Q9BYT1 436 aa20.44■□□□□ 0.86
CIRBP-239ENST00000592467 CPEB1Q9BZB8 566 aaKnown RBP20.44■□□□□ 0.86
CIRBP-239ENST00000592467 DKK3Q9UBP4 350 aa20.44■□□□□ 0.86
CIRBP-239ENST00000592467 ANAPC7Q9UJX3 599 aa20.44■□□□□ 0.86
CIRBP-239ENST00000592467 TSPAN11A1L157 253 aa20.43■□□□□ 0.86
CIRBP-239ENST00000592467 ARHGAP42A6NI28 874 aa20.43■□□□□ 0.86
CIRBP-239ENST00000592467 YKT6O15498 198 aa20.43■□□□□ 0.86
CIRBP-239ENST00000592467 TSPAN6O43657 245 aa20.43■□□□□ 0.86
CIRBP-239ENST00000592467 PAK4O96013 591 aaPredicted RBP20.43■□□□□ 0.86
CIRBP-239ENST00000592467 THEGLP0DJG4 465 aa20.43■□□□□ 0.86
CIRBP-239ENST00000592467 TIMP2P16035 220 aa20.43■□□□□ 0.86
CIRBP-239ENST00000592467 ITIH2P19823 946 aa20.43■□□□□ 0.86
CIRBP-239ENST00000592467 MAPK8IP2Q13387 824 aaPredicted RBP20.43■□□□□ 0.86
CIRBP-239ENST00000592467 NFKBIBQ15653 356 aa20.43■□□□□ 0.86
CIRBP-239ENST00000592467 VSTM4Q8IW00 320 aa20.43■□□□□ 0.86
CIRBP-239ENST00000592467 OXR1Q8N573 874 aa20.43■□□□□ 0.86
CIRBP-239ENST00000592467 FAM71BQ8TC56 605 aa20.43■□□□□ 0.86
CIRBP-239ENST00000592467 TEKT4Q8WW24 435 aa20.43■□□□□ 0.86
CIRBP-239ENST00000592467 ASB12Q8WXK4 309 aa20.43■□□□□ 0.86
CIRBP-239ENST00000592467 NSMCE3Q96MG7 304 aa20.43■□□□□ 0.86
CIRBP-239ENST00000592467 PACSIN1Q9BY11 444 aa20.43■□□□□ 0.86
CIRBP-239ENST00000592467 ZWILCHQ9H900 591 aa20.43■□□□□ 0.86
CIRBP-239ENST00000592467 PCDH18Q9HCL0 1135 aa20.43■□□□□ 0.86
CIRBP-239ENST00000592467 IP6K2Q9UHH9 426 aa20.43■□□□□ 0.86
CIRBP-239ENST00000592467 MSRB2Q9Y3D2 182 aa20.43■□□□□ 0.86
CIRBP-239ENST00000592467 POM121BA6NF01 834 aa20.42■□□□□ 0.86
CIRBP-239ENST00000592467 IGLON5A6NGN9 336 aa20.42■□□□□ 0.86
CIRBP-239ENST00000592467 TNFSF14O43557 240 aa20.42■□□□□ 0.86
CIRBP-239ENST00000592467 BUB1BO60566 1050 aaPredicted RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms