RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 SP110Q9HB58 689 aa15.41■□□□□ 0.06
ERCC1-213ENST00000592023 CWC15Q9P013 229 aaKnown RBP15.41■□□□□ 0.06
ERCC1-213ENST00000592023 IP6K2Q9UHH9 426 aa15.41■□□□□ 0.06
ERCC1-213ENST00000592023 KLK13Q9UKR3 277 aa15.41■□□□□ 0.06
ERCC1-213ENST00000592023 NENFQ9UMX5 172 aa15.41■□□□□ 0.06
ERCC1-213ENST00000592023 MFHAS1Q9Y4C4 1052 aa15.41■□□□□ 0.06
ERCC1-213ENST00000592023 GOLGA8CPA6NN73 597 aa15.4■□□□□ 0.06
ERCC1-213ENST00000592023 NEMP1O14524 444 aa15.4■□□□□ 0.06
ERCC1-213ENST00000592023 YKT6O15498 198 aa15.4■□□□□ 0.06
ERCC1-213ENST00000592023 INSIG1O15503 277 aa15.4■□□□□ 0.06
ERCC1-213ENST00000592023 SPINT1O43278 529 aa15.4■□□□□ 0.06
ERCC1-213ENST00000592023 AP1G1O43747 822 aa15.4■□□□□ 0.06
ERCC1-213ENST00000592023 MAGEC1O60732 1142 aa15.4■□□□□ 0.06
ERCC1-213ENST00000592023 PIGNO95427 931 aa15.4■□□□□ 0.06
ERCC1-213ENST00000592023 ITGAVP06756 1048 aa15.4■□□□□ 0.06
ERCC1-213ENST00000592023 THEGLP0DJG4 465 aa15.4■□□□□ 0.06
ERCC1-213ENST00000592023 HNRNPH3P31942 346 aaKnown RBP15.4■□□□□ 0.06
ERCC1-213ENST00000592023 GJC1P36383 396 aa15.4■□□□□ 0.06
ERCC1-213ENST00000592023 ARL4AP40617 200 aa15.4■□□□□ 0.06
ERCC1-213ENST00000592023 SSR1P43307 286 aaKnown RBP15.4■□□□□ 0.06
ERCC1-213ENST00000592023 ARRB1P49407 418 aaPredicted RBP15.4■□□□□ 0.06
ERCC1-213ENST00000592023 ZNF135P52742 658 aaPredicted RBP15.4■□□□□ 0.06
ERCC1-213ENST00000592023 CLDN2P57739 230 aa15.4■□□□□ 0.06
ERCC1-213ENST00000592023 RPS21P63220 83 aaKnown RBP15.4■□□□□ 0.06
ERCC1-213ENST00000592023 OVGP1Q12889 678 aa15.4■□□□□ 0.06
ERCC1-213ENST00000592023 DPYSQ14117 519 aa15.4■□□□□ 0.06
ERCC1-213ENST00000592023 FGL2Q14314 439 aa15.4■□□□□ 0.06
ERCC1-213ENST00000592023 DPYSL2Q16555 572 aa15.4■□□□□ 0.06
ERCC1-213ENST00000592023 TXNRD3NBQ6F5E7 133 aa15.4■□□□□ 0.06
ERCC1-213ENST00000592023 GCNT7Q6ZNI0 430 aa15.4■□□□□ 0.06
ERCC1-213ENST00000592023 ARHGAP36Q6ZRI8 547 aa15.4■□□□□ 0.06
ERCC1-213ENST00000592023 GLRX5Q86SX6 157 aa15.4■□□□□ 0.06
ERCC1-213ENST00000592023 VSTM4Q8IW00 320 aa15.4■□□□□ 0.06
ERCC1-213ENST00000592023 CHCHD4Q8N4Q1 142 aa15.4■□□□□ 0.06
ERCC1-213ENST00000592023 OXR1Q8N573 874 aa15.4■□□□□ 0.06
ERCC1-213ENST00000592023 NIPA2Q8N8Q9 360 aa15.4■□□□□ 0.06
ERCC1-213ENST00000592023 ZNF564Q8TBZ8 553 aaPredicted RBP15.4■□□□□ 0.06
ERCC1-213ENST00000592023 CDC6Q99741 560 aa15.4■□□□□ 0.06
ERCC1-213ENST00000592023 CALN1Q9BXU9 219 aa15.4■□□□□ 0.06
ERCC1-213ENST00000592023 DEF6Q9H4E7 631 aa15.4■□□□□ 0.06
ERCC1-213ENST00000592023 APOBEC2Q9Y235 224 aaKnown RBP15.4■□□□□ 0.06
ERCC1-213ENST00000592023 PCNX2A6NKB5 2137 aa15.4■□□□□ 0.06
ERCC1-213ENST00000592023 SDC3O75056 442 aa15.39■□□□□ 0.05
ERCC1-213ENST00000592023 TRIM16O95361 564 aa15.39■□□□□ 0.05
ERCC1-213ENST00000592023 TPM1P09493 284 aa15.39■□□□□ 0.05
ERCC1-213ENST00000592023 RARAP10276 462 aa15.39■□□□□ 0.05
ERCC1-213ENST00000592023 SLC25A11Q02978 314 aaKnown RBP15.39■□□□□ 0.05
ERCC1-213ENST00000592023 AFMIDQ63HM1 303 aa15.39■□□□□ 0.05
ERCC1-213ENST00000592023 PTAR1Q7Z6K3 402 aaPredicted RBP15.39■□□□□ 0.05
ERCC1-213ENST00000592023 TP53INP2Q8IXH6 220 aa15.39■□□□□ 0.05
ERCC1-213ENST00000592023 OR13H1Q8NG92 308 aa15.39■□□□□ 0.05
ERCC1-213ENST00000592023 RAB7BQ96AH8 199 aa15.39■□□□□ 0.05
ERCC1-213ENST00000592023 KLHDC7BQ96G42 594 aa15.39■□□□□ 0.05
ERCC1-213ENST00000592023 FEM1CQ96JP0 617 aa15.39■□□□□ 0.05
ERCC1-213ENST00000592023 DNAJC7Q99615 494 aa15.39■□□□□ 0.05
ERCC1-213ENST00000592023 PACSIN1Q9BY11 444 aa15.39■□□□□ 0.05
ERCC1-213ENST00000592023 CTTNBP2NLQ9P2B4 639 aa15.39■□□□□ 0.05
ERCC1-213ENST00000592023 FTSJ1Q9UET6 329 aa15.39■□□□□ 0.05
ERCC1-213ENST00000592023 A6NNZ2 444 aa15.38■□□□□ 0.05
ERCC1-213ENST00000592023 MYO1FO00160 1098 aa15.38■□□□□ 0.05
ERCC1-213ENST00000592023 RAD51BO15315 384 aa15.38■□□□□ 0.05
ERCC1-213ENST00000592023 TSPAN6O43657 245 aa15.38■□□□□ 0.05
ERCC1-213ENST00000592023 MFAP3LO75121 409 aa15.38■□□□□ 0.05
ERCC1-213ENST00000592023 PALMO75781 387 aa15.38■□□□□ 0.05
ERCC1-213ENST00000592023 ATXN1LP0C7T5 689 aaKnown RBP15.38■□□□□ 0.05
ERCC1-213ENST00000592023 AMPD1P23109 780 aa15.38■□□□□ 0.05
ERCC1-213ENST00000592023 RGRP47804 291 aa15.38■□□□□ 0.05
ERCC1-213ENST00000592023 HCAR3P49019 387 aa15.38■□□□□ 0.05
ERCC1-213ENST00000592023 KRT81Q14533 505 aa15.38■□□□□ 0.05
ERCC1-213ENST00000592023 SLC18A3Q16572 532 aa15.38■□□□□ 0.05
ERCC1-213ENST00000592023 BOLA3Q53S33 107 aa15.38■□□□□ 0.05
ERCC1-213ENST00000592023 CCDC157Q569K6 752 aa15.38■□□□□ 0.05
ERCC1-213ENST00000592023 TMCO3Q6UWJ1 677 aa15.38■□□□□ 0.05
ERCC1-213ENST00000592023 UNQ6494/PRO21346Q6UXR6 183 aa15.38■□□□□ 0.05
ERCC1-213ENST00000592023 POLNQ7Z5Q5 900 aa15.38■□□□□ 0.05
ERCC1-213ENST00000592023 RAB44Q7Z6P3 723 aaPredicted RBP15.38■□□□□ 0.05
ERCC1-213ENST00000592023 SLCO6A1Q86UG4 719 aa15.38■□□□□ 0.05
ERCC1-213ENST00000592023 CPNE8Q86YQ8 564 aa15.38■□□□□ 0.05
ERCC1-213ENST00000592023 OR8K1Q8NGG5 319 aa15.38■□□□□ 0.05
ERCC1-213ENST00000592023 SAP25Q8TEE9 199 aa15.38■□□□□ 0.05
ERCC1-213ENST00000592023 TEKT4Q8WW24 435 aa15.38■□□□□ 0.05
ERCC1-213ENST00000592023 CTNNBL1Q8WYA6 563 aaPredicted RBP15.38■□□□□ 0.05
ERCC1-213ENST00000592023 CSPG4P5Q96PW8 444 aa15.38■□□□□ 0.05
ERCC1-213ENST00000592023 CINPQ9BW66 212 aaPredicted RBP15.38■□□□□ 0.05
ERCC1-213ENST00000592023 SLC17A9Q9BYT1 436 aa15.38■□□□□ 0.05
ERCC1-213ENST00000592023 ERVMER34-1Q9H9K5 563 aa15.38■□□□□ 0.05
ERCC1-213ENST00000592023 PCDH18Q9HCL0 1135 aa15.38■□□□□ 0.05
ERCC1-213ENST00000592023 ABHD10Q9NUJ1 306 aa15.38■□□□□ 0.05
ERCC1-213ENST00000592023 ETNK2Q9NVF9 386 aa15.38■□□□□ 0.05
ERCC1-213ENST00000592023 ZNHIT6Q9NWK9 470 aaKnown RBP15.38■□□□□ 0.05
ERCC1-213ENST00000592023 COL5A1P20908 1838 aaPredicted RBP15.38■□□□□ 0.05
ERCC1-213ENST00000592023 TRPM6Q9BX84 2022 aa15.38■□□□□ 0.05
ERCC1-213ENST00000592023 IGLON5A6NGN9 336 aa15.37■□□□□ 0.05
ERCC1-213ENST00000592023 C1QTNF9BB2RNN3 333 aa15.37■□□□□ 0.05
ERCC1-213ENST00000592023 AREL1O15033 823 aa15.37■□□□□ 0.05
ERCC1-213ENST00000592023 PAK4O96013 591 aaPredicted RBP15.37■□□□□ 0.05
ERCC1-213ENST00000592023 C1QTNF9P0C862 333 aa15.37■□□□□ 0.05
ERCC1-213ENST00000592023 XPAP23025 273 aaPredicted RBP15.37■□□□□ 0.05
ERCC1-213ENST00000592023 ADKP55263 362 aaKnown RBP15.37■□□□□ 0.05
ERCC1-213ENST00000592023 CDH6P55285 790 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms