RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 DPYSQ14117 519 aa20.71■□□□□ 0.91
SS18-224ENST00000584083 TXNRD3NBQ6F5E7 133 aa20.71■□□□□ 0.91
SS18-224ENST00000584083 IQCHQ86VS3 1027 aa20.71■□□□□ 0.91
SS18-224ENST00000584083 ARHGAP12Q8IWW6 846 aa20.71■□□□□ 0.91
SS18-224ENST00000584083 NPWQ8N729 165 aa20.71■□□□□ 0.91
SS18-224ENST00000584083 TEKT4Q8WW24 435 aa20.71■□□□□ 0.91
SS18-224ENST00000584083 RAB7BQ96AH8 199 aa20.71■□□□□ 0.91
SS18-224ENST00000584083 KLHDC7BQ96G42 594 aa20.71■□□□□ 0.91
SS18-224ENST00000584083 SP110Q9HB58 689 aa20.71■□□□□ 0.91
SS18-224ENST00000584083 FZD3Q9NPG1 666 aa20.71■□□□□ 0.91
SS18-224ENST00000584083 ABHD10Q9NUJ1 306 aa20.71■□□□□ 0.91
SS18-224ENST00000584083 SSU72P8A0A1W2PR75 194 aa20.7■□□□□ 0.9
SS18-224ENST00000584083 AP1G1O43747 822 aa20.7■□□□□ 0.9
SS18-224ENST00000584083 PCDHGA12O60330 932 aa20.7■□□□□ 0.9
SS18-224ENST00000584083 MFAP3LO75121 409 aa20.7■□□□□ 0.9
SS18-224ENST00000584083 PALMO75781 387 aa20.7■□□□□ 0.9
SS18-224ENST00000584083 H2AFZP0C0S5 128 aa20.7■□□□□ 0.9
SS18-224ENST00000584083 HNRNPA2B1P22626 353 aaKnown RBP20.7■□□□□ 0.9
SS18-224ENST00000584083 AMPD1P23109 780 aa20.7■□□□□ 0.9
SS18-224ENST00000584083 ABL2P42684 1182 aa20.7■□□□□ 0.9
SS18-224ENST00000584083 SHC2P98077 582 aa20.7■□□□□ 0.9
SS18-224ENST00000584083 OVGP1Q12889 678 aa20.7■□□□□ 0.9
SS18-224ENST00000584083 KRT81Q14533 505 aa20.7■□□□□ 0.9
SS18-224ENST00000584083 HADHQ16836 314 aaKnown RBP20.7■□□□□ 0.9
SS18-224ENST00000584083 TMEM259Q4ZIN3 620 aa20.7■□□□□ 0.9
SS18-224ENST00000584083 AFMIDQ63HM1 303 aa20.7■□□□□ 0.9
SS18-224ENST00000584083 KIAA1161Q6NSJ0 714 aa20.7■□□□□ 0.9
SS18-224ENST00000584083 DBX2Q6ZNG2 339 aa20.7■□□□□ 0.9
SS18-224ENST00000584083 H2AFVQ71UI9 128 aa20.7■□□□□ 0.9
SS18-224ENST00000584083 POLNQ7Z5Q5 900 aa20.7■□□□□ 0.9
SS18-224ENST00000584083 TTC7BQ86TV6 843 aa20.7■□□□□ 0.9
SS18-224ENST00000584083 LZTR1Q8N653 840 aa20.7■□□□□ 0.9
SS18-224ENST00000584083 PACSIN1Q9BY11 444 aa20.7■□□□□ 0.9
SS18-224ENST00000584083 BTBD3Q9Y2F9 522 aa20.7■□□□□ 0.9
SS18-224ENST00000584083 MFHAS1Q9Y4C4 1052 aa20.7■□□□□ 0.9
SS18-224ENST00000584083 ANKRD36A6QL64 1941 aa20.69■□□□□ 0.9
SS18-224ENST00000584083 SHROOM3Q8TF72 1996 aa20.69■□□□□ 0.9
SS18-224ENST00000584083 INSIG1O15503 277 aa20.69■□□□□ 0.9
SS18-224ENST00000584083 TSPAN6O43657 245 aa20.69■□□□□ 0.9
SS18-224ENST00000584083 CBFA2T3O75081 653 aa20.69■□□□□ 0.9
SS18-224ENST00000584083 GRK6P43250 576 aa20.69■□□□□ 0.9
SS18-224ENST00000584083 ARRB1P49407 418 aaPredicted RBP20.69■□□□□ 0.9
SS18-224ENST00000584083 SLC25A11Q02978 314 aaKnown RBP20.69■□□□□ 0.9
SS18-224ENST00000584083 ASTE1Q2TB18 679 aaPredicted RBP20.69■□□□□ 0.9
SS18-224ENST00000584083 INAVAQ3KP66 663 aa20.69■□□□□ 0.9
SS18-224ENST00000584083 TMCO3Q6UWJ1 677 aa20.69■□□□□ 0.9
SS18-224ENST00000584083 SPATS2Q86XZ4 545 aaKnown RBP20.69■□□□□ 0.9
SS18-224ENST00000584083 CCDC42Q96M95 316 aa20.69■□□□□ 0.9
SS18-224ENST00000584083 CSPG4P5Q96PW8 444 aa20.69■□□□□ 0.9
SS18-224ENST00000584083 CHP1Q99653 195 aa20.69■□□□□ 0.9
SS18-224ENST00000584083 CDC6Q99741 560 aa20.69■□□□□ 0.9
SS18-224ENST00000584083 SLC17A9Q9BYT1 436 aa20.69■□□□□ 0.9
SS18-224ENST00000584083 TRIM5Q9C035 493 aa20.69■□□□□ 0.9
SS18-224ENST00000584083 ERVMER34-1Q9H9K5 563 aa20.69■□□□□ 0.9
SS18-224ENST00000584083 PCDH18Q9HCL0 1135 aa20.69■□□□□ 0.9
SS18-224ENST00000584083 UVRAGQ9P2Y5 699 aa20.69■□□□□ 0.9
SS18-224ENST00000584083 ITM2BQ9Y287 266 aa20.69■□□□□ 0.9
SS18-224ENST00000584083 TDRD6O60522 2096 aaKnown RBP20.68■□□□□ 0.9
SS18-224ENST00000584083 TOP3BO95985 862 aaKnown RBP20.68■□□□□ 0.9
SS18-224ENST00000584083 PAK4O96013 591 aaPredicted RBP20.68■□□□□ 0.9
SS18-224ENST00000584083 ITGAVP06756 1048 aa20.68■□□□□ 0.9
SS18-224ENST00000584083 XPAP23025 273 aaPredicted RBP20.68■□□□□ 0.9
SS18-224ENST00000584083 GJC1P36383 396 aa20.68■□□□□ 0.9
SS18-224ENST00000584083 CDH6P55285 790 aa20.68■□□□□ 0.9
SS18-224ENST00000584083 CLDN2P57739 230 aa20.68■□□□□ 0.9
SS18-224ENST00000584083 IL10RBQ08334 325 aa20.68■□□□□ 0.9
SS18-224ENST00000584083 SGCGQ13326 291 aa20.68■□□□□ 0.9
SS18-224ENST00000584083 LRRC73Q5JTD7 316 aa20.68■□□□□ 0.9
SS18-224ENST00000584083 ARHGAP36Q6ZRI8 547 aa20.68■□□□□ 0.9
SS18-224ENST00000584083 GATAD2AQ86YP4 633 aa20.68■□□□□ 0.9
SS18-224ENST00000584083 OXR1Q8N573 874 aa20.68■□□□□ 0.9
SS18-224ENST00000584083 TMEM145Q8NBT3 493 aa20.68■□□□□ 0.9
SS18-224ENST00000584083 VOPP1Q96AW1 172 aa20.68■□□□□ 0.9
SS18-224ENST00000584083 CNTNAP3BQ96NU0 1288 aa20.68■□□□□ 0.9
SS18-224ENST00000584083 CINPQ9BW66 212 aaPredicted RBP20.68■□□□□ 0.9
SS18-224ENST00000584083 CNTNAP3Q9BZ76 1288 aa20.68■□□□□ 0.9
SS18-224ENST00000584083 CPEB1Q9BZB8 566 aaKnown RBP20.68■□□□□ 0.9
SS18-224ENST00000584083 IPO11Q9UI26 975 aaKnown RBP20.68■□□□□ 0.9
SS18-224ENST00000584083 IGLON5A6NGN9 336 aa20.67■□□□□ 0.9
SS18-224ENST00000584083 AKR1B15C9JRZ8 316 aaPredicted RBP20.67■□□□□ 0.9
SS18-224ENST00000584083 YKT6O15498 198 aa20.67■□□□□ 0.9
SS18-224ENST00000584083 PROSCO94903 275 aa20.67■□□□□ 0.9
SS18-224ENST00000584083 PIGNO95427 931 aa20.67■□□□□ 0.9
SS18-224ENST00000584083 THEGLP0DJG4 465 aa20.67■□□□□ 0.9
SS18-224ENST00000584083 SPINK2P20155 84 aa20.67■□□□□ 0.9
SS18-224ENST00000584083 GRM3Q14832 879 aa20.67■□□□□ 0.9
SS18-224ENST00000584083 CFAP58Q5T655 872 aa20.67■□□□□ 0.9
SS18-224ENST00000584083 GLRX5Q86SX6 157 aa20.67■□□□□ 0.9
SS18-224ENST00000584083 ZSCAN30Q86W11 494 aa20.67■□□□□ 0.9
SS18-224ENST00000584083 CNGA4Q8IV77 575 aa20.67■□□□□ 0.9
SS18-224ENST00000584083 TP53INP2Q8IXH6 220 aa20.67■□□□□ 0.9
SS18-224ENST00000584083 TSEN2Q8NCE0 465 aaKnown RBP20.67■□□□□ 0.9
SS18-224ENST00000584083 CALN1Q9BXU9 219 aa20.67■□□□□ 0.9
SS18-224ENST00000584083 NHEJ1Q9H9Q4 299 aaPredicted RBP20.67■□□□□ 0.9
SS18-224ENST00000584083 SPTLC3Q9NUV7 552 aa20.67■□□□□ 0.9
SS18-224ENST00000584083 ETNK2Q9NVF9 386 aa20.67■□□□□ 0.9
SS18-224ENST00000584083 DKK3Q9UBP4 350 aa20.67■□□□□ 0.9
SS18-224ENST00000584083 GGT7Q9UJ14 662 aa20.67■□□□□ 0.9
SS18-224ENST00000584083 APOBEC2Q9Y235 224 aaKnown RBP20.67■□□□□ 0.9
SS18-224ENST00000584083 TPRP12270 2363 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms