RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-223ENST00000582114 USP12O75317 370 aa11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 TMCC1O94876 653 aa11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 GSRP00390 522 aa11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 TPM2P07951 284 aa11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 KRT3P12035 628 aa11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 NME1P15531 152 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 GPD1P21695 349 aa11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 RFC1P35251 1148 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 ACTN2P35609 894 aa11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 ETFBP38117 255 aa11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 STAT1P42224 750 aa11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 PTPN9P43378 593 aa11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 NSFP46459 744 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 SNRPD1P62314 119 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 GABREP78334 506 aa11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 NRG1Q02297 640 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 PTP4A2Q12974 167 aa11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 EIF2B5Q13144 721 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 C1orf61Q13536 156 aa11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 MYLK3Q32MK0 819 aa11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 CDKAL1Q5VV42 579 aa11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 CDCP2Q5VXM1 449 aa11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 STRADAQ7RTN6 431 aa11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 TTC7BQ86TV6 843 aa11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 DCP2Q8IU60 420 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 ENOX1Q8TC92 643 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 VOPP1Q96AW1 172 aa11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 ISG20Q96AZ6 181 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 IFT43Q96FT9 208 aa11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 EXOC2Q96KP1 924 aa11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 DEPDC7Q96QD5 511 aa11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 UBL7Q96S82 380 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 LGMNQ99538 433 aa11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 WRAP53Q9BUR4 548 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 DUSP23Q9BVJ7 150 aa11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 MAGEH1Q9H213 219 aa11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 PRORYQ9H606 182 aa11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 NOL6Q9H6R4 1146 aaKnown RBP11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 FANCLQ9NW38 375 aa11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 PNMA8BQ9ULN7 279 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-223ENST00000582114 MUSKO15146 869 aa11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 INSIG1O15503 277 aa11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 CCP110O43303 1012 aa11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 KDELR3O43731 214 aa11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 CREB3O43889 395 aa11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 POP4O95707 220 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 UNGP13051 313 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 TGM2P21980 687 aa11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 EPHB2P29323 1055 aa11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 IGFALSP35858 605 aa11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 DUSP3P51452 185 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 GEMIN4P57678 1058 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 PFN3P60673 137 aa11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 RHOAP61586 193 aa11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 CXADRP78310 365 aa11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 SYCP1Q15431 976 aa11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 CLEC16AQ2KHT3 1053 aa11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 WDR59Q6PJI9 974 aa11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 GDPD4Q6W3E5 623 aa11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 TRIM72Q6ZMU5 477 aa11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 EFL1Q7Z2Z2 1120 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 SLFN11Q7Z7L1 901 aa11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 SPACA3Q8IXA5 215 aa11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 CACTIN-AS1Q8N1I8 211 aa11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 FAM181AQ8N9Y4 354 aa11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 FAM174AQ8TBP5 190 aa11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 CXorf40AQ8TE69 158 aa11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 CENPIQ92674 756 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 RAB7BQ96AH8 199 aa11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 HMCESQ96FZ2 354 aa11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 LENG8Q96PV6 779 aaPredicted RBP11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 SYNDIG1Q9H7V2 258 aa11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 MBNL1Q9NR56 388 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 APOBEC3BQ9UH17 382 aaKnown RBP11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 SIK3Q9Y2K2 1263 aa11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 COQ6Q9Y2Z9 468 aa11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 CHD5Q8TDI0 1954 aa11.79□□□□□ -0.52
CDK5RAP3-223ENST00000582114 GCATO75600 419 aa11.78□□□□□ -0.52
CDK5RAP3-223ENST00000582114 PIGNO95427 931 aa11.78□□□□□ -0.52
CDK5RAP3-223ENST00000582114 IGSF6O95976 241 aa11.78□□□□□ -0.52
CDK5RAP3-223ENST00000582114 GP1BAP07359 652 aa11.78□□□□□ -0.52
CDK5RAP3-223ENST00000582114 CELA2BP08218 269 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-223ENST00000582114 THOP1P52888 689 aa11.78□□□□□ -0.52
CDK5RAP3-223ENST00000582114 COPB1P53618 953 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-223ENST00000582114 ADKP55263 362 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-223ENST00000582114 TLE3Q04726 772 aa11.78□□□□□ -0.52
CDK5RAP3-223ENST00000582114 KLHL40Q2TBA0 621 aa11.78□□□□□ -0.52
CDK5RAP3-223ENST00000582114 PRRT3Q5FWE3 981 aa11.78□□□□□ -0.52
CDK5RAP3-223ENST00000582114 C3orf38Q5JPI3 329 aa11.78□□□□□ -0.52
CDK5RAP3-223ENST00000582114 EFHC2Q5JST6 749 aa11.78□□□□□ -0.52
CDK5RAP3-223ENST00000582114 PERM1Q5SV97 790 aa11.78□□□□□ -0.52
CDK5RAP3-223ENST00000582114 ZCCHC8Q6NZY4 707 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-223ENST00000582114 DNAJC24Q6P3W2 148 aa11.78□□□□□ -0.52
CDK5RAP3-223ENST00000582114 FOXR1Q6PIV2 292 aa11.78□□□□□ -0.52
CDK5RAP3-223ENST00000582114 PLPP6Q8IY26 295 aa11.78□□□□□ -0.52
CDK5RAP3-223ENST00000582114 NEK11Q8NG66 645 aa11.78□□□□□ -0.52
CDK5RAP3-223ENST00000582114 SLC39A7Q92504 469 aa11.78□□□□□ -0.52
CDK5RAP3-223ENST00000582114 CENPTQ96BT3 561 aa11.78□□□□□ -0.52
CDK5RAP3-223ENST00000582114 GDAP1L1Q96MZ0 367 aa11.78□□□□□ -0.52
CDK5RAP3-223ENST00000582114 MCEEQ96PE7 176 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms