RNA–Protein interactions for RNA: ENST00000579256.1

AC004408.1-201, humanhuman

TSL 4 BASIC

Gene AC004408.1, Length 573 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004408.1-201ENST00000579256 ATP1A3P13637 1013 aa16.56■□□□□ 0.24
AC004408.1-201ENST00000579256 NME1P15531 152 aaKnown RBP16.56■□□□□ 0.24
AC004408.1-201ENST00000579256 UBXN1Q04323 297 aa16.56■□□□□ 0.24
AC004408.1-201ENST00000579256 EIF2B5Q13144 721 aaKnown RBP16.56■□□□□ 0.24
AC004408.1-201ENST00000579256 CDCP2Q5VXM1 449 aa16.56■□□□□ 0.24
AC004408.1-201ENST00000579256 SLFN11Q7Z7L1 901 aa16.56■□□□□ 0.24
AC004408.1-201ENST00000579256 DNAAF5Q86Y56 855 aa16.56■□□□□ 0.24
AC004408.1-201ENST00000579256 CACTIN-AS1Q8N1I8 211 aa16.56■□□□□ 0.24
AC004408.1-201ENST00000579256 RTL3Q8N8U3 475 aaKnown RBP16.56■□□□□ 0.24
AC004408.1-201ENST00000579256 NEK11Q8NG66 645 aa16.56■□□□□ 0.24
AC004408.1-201ENST00000579256 CENPTQ96BT3 561 aa16.56■□□□□ 0.24
AC004408.1-201ENST00000579256 IFT43Q96FT9 208 aa16.56■□□□□ 0.24
AC004408.1-201ENST00000579256 HMCESQ96FZ2 354 aa16.56■□□□□ 0.24
AC004408.1-201ENST00000579256 NRSN2Q9GZP1 204 aa16.56■□□□□ 0.24
AC004408.1-201ENST00000579256 TCEAL2Q9H3H9 227 aaPredicted RBP16.56■□□□□ 0.24
AC004408.1-201ENST00000579256 FZD10Q9ULW2 581 aa16.56■□□□□ 0.24
AC004408.1-201ENST00000579256 CLCA2Q9UQC9 943 aa16.56■□□□□ 0.24
AC004408.1-201ENST00000579256 DAAM1Q9Y4D1 1078 aa16.56■□□□□ 0.24
AC004408.1-201ENST00000579256 TSPAN6O43657 245 aa16.55■□□□□ 0.24
AC004408.1-201ENST00000579256 BUB1O43683 1085 aa16.55■□□□□ 0.24
AC004408.1-201ENST00000579256 POP4O95707 220 aaKnown RBP16.55■□□□□ 0.24
AC004408.1-201ENST00000579256 CSF2P04141 144 aa16.55■□□□□ 0.24
AC004408.1-201ENST00000579256 CALB1P05937 261 aa16.55■□□□□ 0.24
AC004408.1-201ENST00000579256 TIMP2P16035 220 aa16.55■□□□□ 0.24
AC004408.1-201ENST00000579256 ETFBP38117 255 aa16.55■□□□□ 0.24
AC004408.1-201ENST00000579256 EIF2S3P41091 472 aaKnown RBP16.55■□□□□ 0.24
AC004408.1-201ENST00000579256 ZNF143P52747 638 aaPredicted RBP16.55■□□□□ 0.24
AC004408.1-201ENST00000579256 PFN3P60673 137 aa16.55■□□□□ 0.24
AC004408.1-201ENST00000579256 MYL5Q02045 173 aa16.55■□□□□ 0.24
AC004408.1-201ENST00000579256 CYTH1Q15438 398 aa16.55■□□□□ 0.24
AC004408.1-201ENST00000579256 NYAP1Q6ZVC0 841 aa16.55■□□□□ 0.24
AC004408.1-201ENST00000579256 ARFGAP1Q8N6T3 406 aa16.55■□□□□ 0.24
AC004408.1-201ENST00000579256 ZNF548Q8NEK5 533 aaPredicted RBP16.55■□□□□ 0.24
AC004408.1-201ENST00000579256 MCEEQ96PE7 176 aa16.55■□□□□ 0.24
AC004408.1-201ENST00000579256 MBNL1Q9NR56 388 aaKnown RBP16.55■□□□□ 0.24
AC004408.1-201ENST00000579256 NLGN3Q9NZ94 848 aa16.55■□□□□ 0.24
AC004408.1-201ENST00000579256 LHX3Q9UBR4 397 aa16.55■□□□□ 0.24
AC004408.1-201ENST00000579256 RAI2Q9Y5P3 530 aa16.55■□□□□ 0.24
AC004408.1-201ENST00000579256 AK5Q9Y6K8 562 aa16.55■□□□□ 0.24
AC004408.1-201ENST00000579256 MGAQ8IWI9 3026 aa16.55■□□□□ 0.24
AC004408.1-201ENST00000579256 WASH4PA8MWX3 477 aa16.54■□□□□ 0.24
AC004408.1-201ENST00000579256 RASA4BC9J798 803 aa16.54■□□□□ 0.24
AC004408.1-201ENST00000579256 TEX33O43247 280 aa16.54■□□□□ 0.24
AC004408.1-201ENST00000579256 RASA4O43374 803 aa16.54■□□□□ 0.24
AC004408.1-201ENST00000579256 OPA1O60313 960 aa16.54■□□□□ 0.24
AC004408.1-201ENST00000579256 BRINP1O60477 761 aa16.54■□□□□ 0.24
AC004408.1-201ENST00000579256 EPHB2P29323 1055 aa16.54■□□□□ 0.24
AC004408.1-201ENST00000579256 IGFALSP35858 605 aa16.54■□□□□ 0.24
AC004408.1-201ENST00000579256 SNRPD1P62314 119 aaKnown RBP16.54■□□□□ 0.24
AC004408.1-201ENST00000579256 DAB2P98082 770 aa16.54■□□□□ 0.24
AC004408.1-201ENST00000579256 SERINC3Q13530 473 aa16.54■□□□□ 0.24
AC004408.1-201ENST00000579256 PDE1CQ14123 709 aaPredicted RBP16.54■□□□□ 0.24
AC004408.1-201ENST00000579256 DNAJC24Q6P3W2 148 aa16.54■□□□□ 0.24
AC004408.1-201ENST00000579256 SCYL2Q6P3W7 929 aa16.54■□□□□ 0.24
AC004408.1-201ENST00000579256 GDPD4Q6W3E5 623 aa16.54■□□□□ 0.24
AC004408.1-201ENST00000579256 IRF2BP2Q7Z5L9 587 aa16.54■□□□□ 0.24
AC004408.1-201ENST00000579256 DCP2Q8IU60 420 aaKnown RBP16.54■□□□□ 0.24
AC004408.1-201ENST00000579256 MCOLN2Q8IZK6 566 aa16.54■□□□□ 0.24
AC004408.1-201ENST00000579256 RBFAQ8N0V3 343 aa16.54■□□□□ 0.24
AC004408.1-201ENST00000579256 FAM181AQ8N9Y4 354 aa16.54■□□□□ 0.24
AC004408.1-201ENST00000579256 ASB12Q8WXK4 309 aa16.54■□□□□ 0.24
AC004408.1-201ENST00000579256 RAB7BQ96AH8 199 aa16.54■□□□□ 0.24
AC004408.1-201ENST00000579256 PCMTD1Q96MG8 357 aaPredicted RBP16.54■□□□□ 0.24
AC004408.1-201ENST00000579256 TTYH3Q9C0H2 523 aa16.54■□□□□ 0.24
AC004408.1-201ENST00000579256 SEPT11Q9NVA2 429 aaKnown RBP16.54■□□□□ 0.24
AC004408.1-201ENST00000579256 ANO10Q9NW15 660 aa16.54■□□□□ 0.24
AC004408.1-201ENST00000579256 GPATCH2LQ9NWQ4 482 aa16.54■□□□□ 0.24
AC004408.1-201ENST00000579256 COL27A1Q8IZC6 1860 aaPredicted RBP16.54■□□□□ 0.24
AC004408.1-201ENST00000579256 KALRNO60229 2985 aa16.53■□□□□ 0.24
AC004408.1-201ENST00000579256 CREB3O43889 395 aa16.53■□□□□ 0.24
AC004408.1-201ENST00000579256 MMP20O60882 483 aa16.53■□□□□ 0.24
AC004408.1-201ENST00000579256 GCATO75600 419 aa16.53■□□□□ 0.24
AC004408.1-201ENST00000579256 TPM2P07951 284 aa16.53■□□□□ 0.24
AC004408.1-201ENST00000579256 RABIFP47224 123 aa16.53■□□□□ 0.24
AC004408.1-201ENST00000579256 GEMIN4P57678 1058 aaKnown RBP16.53■□□□□ 0.24
AC004408.1-201ENST00000579256 HNRNPKP61978 463 aaKnown RBP eCLIP16.53■□□□□ 0.24
AC004408.1-201ENST00000579256 E2F1Q01094 437 aa16.53■□□□□ 0.24
AC004408.1-201ENST00000579256 SGCGQ13326 291 aa16.53■□□□□ 0.24
AC004408.1-201ENST00000579256 STX1AQ16623 288 aa16.53■□□□□ 0.24
AC004408.1-201ENST00000579256 CA9Q16790 459 aa16.53■□□□□ 0.24
AC004408.1-201ENST00000579256 ACAD10Q6JQN1 1059 aa16.53■□□□□ 0.24
AC004408.1-201ENST00000579256 PARGQ86W56 976 aa16.53■□□□□ 0.24
AC004408.1-201ENST00000579256 FAM174AQ8TBP5 190 aa16.53■□□□□ 0.24
AC004408.1-201ENST00000579256 EXOC2Q96KP1 924 aa16.53■□□□□ 0.24
AC004408.1-201ENST00000579256 CNPY3Q9BT09 278 aa16.53■□□□□ 0.24
AC004408.1-201ENST00000579256 PDFQ9HBH1 243 aa16.53■□□□□ 0.24
AC004408.1-201ENST00000579256 HPCAL4Q9UM19 191 aa16.53■□□□□ 0.24
AC004408.1-201ENST00000579256 MFHAS1Q9Y4C4 1052 aa16.53■□□□□ 0.24
AC004408.1-201ENST00000579256 A0A1W2PNU3 283 aaPredicted RBP16.52■□□□□ 0.24
AC004408.1-201ENST00000579256 J3KR12 359 aa16.52■□□□□ 0.24
AC004408.1-201ENST00000579256 FPGTO14772 594 aa16.52■□□□□ 0.24
AC004408.1-201ENST00000579256 PIGNO95427 931 aa16.52■□□□□ 0.24
AC004408.1-201ENST00000579256 DEFB133Q30KQ1 61 aa16.52■□□□□ 0.24
AC004408.1-201ENST00000579256 EFHC2Q5JST6 749 aa16.52■□□□□ 0.24
AC004408.1-201ENST00000579256 E4F1Q66K89 784 aaPredicted RBP16.52■□□□□ 0.24
AC004408.1-201ENST00000579256 SASS6Q6UVJ0 657 aa16.52■□□□□ 0.24
AC004408.1-201ENST00000579256 TTC7BQ86TV6 843 aa16.52■□□□□ 0.24
AC004408.1-201ENST00000579256 VPS36Q86VN1 386 aa16.52■□□□□ 0.24
AC004408.1-201ENST00000579256 ZSWIM9Q86XI8 627 aa16.52■□□□□ 0.24
AC004408.1-201ENST00000579256 UMODL1-AS1Q8N2C9 162 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms