RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 KIAA1161Q6NSJ0 714 aa18.38■□□□□ 0.53
CHD3-214ENST00000572579 CYP4V2Q6ZWL3 525 aaPredicted RBP18.38■□□□□ 0.53
CHD3-214ENST00000572579 OR4C6Q8NH72 309 aa18.38■□□□□ 0.53
CHD3-214ENST00000572579 RFFLQ8WZ73 363 aa18.38■□□□□ 0.53
CHD3-214ENST00000572579 CENPTQ96BT3 561 aa18.38■□□□□ 0.53
CHD3-214ENST00000572579 CRELD1Q96HD1 420 aa18.38■□□□□ 0.53
CHD3-214ENST00000572579 NAP1L5Q96NT1 182 aaPredicted RBP18.38■□□□□ 0.53
CHD3-214ENST00000572579 LENG8Q96PV6 779 aaPredicted RBP18.38■□□□□ 0.53
CHD3-214ENST00000572579 PEBP4Q96S96 227 aa18.38■□□□□ 0.53
CHD3-214ENST00000572579 TP53BP1Q12888 1972 aaPredicted RBP18.37■□□□□ 0.53
CHD3-214ENST00000572579 CHD5Q8TDI0 1954 aa18.37■□□□□ 0.53
CHD3-214ENST00000572579 RASA4BC9J798 803 aa18.37■□□□□ 0.53
CHD3-214ENST00000572579 RASA4O43374 803 aa18.37■□□□□ 0.53
CHD3-214ENST00000572579 CREB3O43889 395 aa18.37■□□□□ 0.53
CHD3-214ENST00000572579 NEBLO76041 1014 aa18.37■□□□□ 0.53
CHD3-214ENST00000572579 PFN3P60673 137 aa18.37■□□□□ 0.53
CHD3-214ENST00000572579 EIF2B5Q13144 721 aaKnown RBP18.37■□□□□ 0.53
CHD3-214ENST00000572579 SERINC3Q13530 473 aa18.37■□□□□ 0.53
CHD3-214ENST00000572579 ANO6Q4KMQ2 910 aa18.37■□□□□ 0.53
CHD3-214ENST00000572579 KYAT3Q6YP21 454 aaKnown RBP18.37■□□□□ 0.53
CHD3-214ENST00000572579 UMODL1-AS1Q8N2C9 162 aa18.37■□□□□ 0.53
CHD3-214ENST00000572579 LRIG1Q96JA1 1093 aa18.37■□□□□ 0.53
CHD3-214ENST00000572579 TTYH3Q9C0H2 523 aa18.37■□□□□ 0.53
CHD3-214ENST00000572579 LRRC19Q9H756 370 aa18.37■□□□□ 0.53
CHD3-214ENST00000572579 LHX3Q9UBR4 397 aa18.37■□□□□ 0.53
CHD3-214ENST00000572579 SPTY2D1-AS1A0A0U1RR47 76 aa18.36■□□□□ 0.53
CHD3-214ENST00000572579 A6NNZ2 444 aa18.36■□□□□ 0.53
CHD3-214ENST00000572579 TMCO5BA8MYB1 307 aa18.36■□□□□ 0.53
CHD3-214ENST00000572579 J3KR12 359 aa18.36■□□□□ 0.53
CHD3-214ENST00000572579 ATMINO43313 823 aaPredicted RBP18.36■□□□□ 0.53
CHD3-214ENST00000572579 TSPAN6O43657 245 aa18.36■□□□□ 0.53
CHD3-214ENST00000572579 TLX3O43711 291 aaPredicted RBP18.36■□□□□ 0.53
CHD3-214ENST00000572579 CSF2P04141 144 aa18.36■□□□□ 0.53
CHD3-214ENST00000572579 FERP16591 822 aa18.36■□□□□ 0.53
CHD3-214ENST00000572579 SNRPD1P62314 119 aaKnown RBP18.36■□□□□ 0.53
CHD3-214ENST00000572579 ILKQ13418 452 aa18.36■□□□□ 0.53
CHD3-214ENST00000572579 EFHC2Q5JST6 749 aa18.36■□□□□ 0.53
CHD3-214ENST00000572579 PLEKHA7Q6IQ23 1121 aa18.36■□□□□ 0.53
CHD3-214ENST00000572579 GDPD4Q6W3E5 623 aa18.36■□□□□ 0.53
CHD3-214ENST00000572579 NYAP1Q6ZVC0 841 aa18.36■□□□□ 0.53
CHD3-214ENST00000572579 ZNF571Q7Z3V5 609 aaPredicted RBP18.36■□□□□ 0.53
CHD3-214ENST00000572579 PTAR1Q7Z6K3 402 aaPredicted RBP18.36■□□□□ 0.53
CHD3-214ENST00000572579 ANKRD20A12PQ8NF67 263 aa18.36■□□□□ 0.53
CHD3-214ENST00000572579 IFT43Q96FT9 208 aa18.36■□□□□ 0.53
CHD3-214ENST00000572579 NSMCE3Q96MG7 304 aa18.36■□□□□ 0.53
CHD3-214ENST00000572579 TCEAL2Q9H3H9 227 aaPredicted RBP18.36■□□□□ 0.53
CHD3-214ENST00000572579 PDFQ9HBH1 243 aa18.36■□□□□ 0.53
CHD3-214ENST00000572579 MBNL1Q9NR56 388 aaKnown RBP18.36■□□□□ 0.53
CHD3-214ENST00000572579 DNAJC28Q9NX36 388 aa18.36■□□□□ 0.53
CHD3-214ENST00000572579 HPCAL4Q9UM19 191 aa18.36■□□□□ 0.53
CHD3-214ENST00000572579 MFHAS1Q9Y4C4 1052 aa18.36■□□□□ 0.53
CHD3-214ENST00000572579 ATRXP46100 2492 aa18.35■□□□□ 0.53
CHD3-214ENST00000572579 A0A087WV48 116 aa18.35■□□□□ 0.53
CHD3-214ENST00000572579 LRRC53A6NM62 1247 aa18.35■□□□□ 0.53
CHD3-214ENST00000572579 K7ESM1 405 aa18.35■□□□□ 0.53
CHD3-214ENST00000572579 SCAMP1O15126 338 aa18.35■□□□□ 0.53
CHD3-214ENST00000572579 BUB1BO60566 1050 aaPredicted RBP18.35■□□□□ 0.53
CHD3-214ENST00000572579 MMP20O60882 483 aa18.35■□□□□ 0.53
CHD3-214ENST00000572579 CDK4P11802 303 aa18.35■□□□□ 0.53
CHD3-214ENST00000572579 CKMT1AP12532 417 aa18.35■□□□□ 0.53
CHD3-214ENST00000572579 NME1P15531 152 aaKnown RBP18.35■□□□□ 0.53
CHD3-214ENST00000572579 GEMIN4P57678 1058 aaKnown RBP18.35■□□□□ 0.53
CHD3-214ENST00000572579 INO80DQ53TQ3 878 aaPredicted RBP18.35■□□□□ 0.53
CHD3-214ENST00000572579 TMC6Q7Z403 805 aa18.35■□□□□ 0.53
CHD3-214ENST00000572579 TTC7BQ86TV6 843 aa18.35■□□□□ 0.53
CHD3-214ENST00000572579 DCBLD1Q8N8Z6 715 aa18.35■□□□□ 0.53
CHD3-214ENST00000572579 ASB12Q8WXK4 309 aa18.35■□□□□ 0.53
CHD3-214ENST00000572579 RAB7BQ96AH8 199 aa18.35■□□□□ 0.53
CHD3-214ENST00000572579 CELF6Q96J87 481 aaKnown RBP18.35■□□□□ 0.53
CHD3-214ENST00000572579 EXOC2Q96KP1 924 aa18.35■□□□□ 0.53
CHD3-214ENST00000572579 APOLD1Q96LR9 279 aa18.35■□□□□ 0.53
CHD3-214ENST00000572579 TRPM6Q9BX84 2022 aa18.35■□□□□ 0.53
CHD3-214ENST00000572579 TMEM191CA6NGB0 347 aa18.34■□□□□ 0.53
CHD3-214ENST00000572579 DDX3XO00571 662 aaKnown RBP eCLIP18.34■□□□□ 0.53
CHD3-214ENST00000572579 CASC3O15234 703 aaKnown RBP18.34■□□□□ 0.53
CHD3-214ENST00000572579 TNFAIP3P21580 790 aa18.34■□□□□ 0.53
CHD3-214ENST00000572579 IGFALSP35858 605 aa18.34■□□□□ 0.53
CHD3-214ENST00000572579 RGRP47804 291 aa18.34■□□□□ 0.53
CHD3-214ENST00000572579 YBEYP58557 167 aaPredicted RBP18.34■□□□□ 0.53
CHD3-214ENST00000572579 SGCGQ13326 291 aa18.34■□□□□ 0.53
CHD3-214ENST00000572579 RTP5Q14D33 572 aa18.34■□□□□ 0.53
CHD3-214ENST00000572579 CDCP2Q5VXM1 449 aa18.34■□□□□ 0.53
CHD3-214ENST00000572579 DCUN1D2Q6PH85 259 aa18.34■□□□□ 0.53
CHD3-214ENST00000572579 PDZD3Q86UT5 571 aa18.34■□□□□ 0.53
CHD3-214ENST00000572579 ZSWIM9Q86XI8 627 aa18.34■□□□□ 0.53
CHD3-214ENST00000572579 DCP2Q8IU60 420 aaKnown RBP18.34■□□□□ 0.53
CHD3-214ENST00000572579 TP53INP2Q8IXH6 220 aa18.34■□□□□ 0.53
CHD3-214ENST00000572579 CACTIN-AS1Q8N1I8 211 aa18.34■□□□□ 0.53
CHD3-214ENST00000572579 ZNF548Q8NEK5 533 aaPredicted RBP18.34■□□□□ 0.53
CHD3-214ENST00000572579 BPIFA3Q9BQP9 254 aa18.34■□□□□ 0.53
CHD3-214ENST00000572579 FUCA2Q9BTY2 467 aa18.34■□□□□ 0.53
CHD3-214ENST00000572579 SLC39A8Q9C0K1 460 aa18.34■□□□□ 0.53
CHD3-214ENST00000572579 HAUS4Q9H6D7 363 aa18.34■□□□□ 0.53
CHD3-214ENST00000572579 MYO6Q9UM54 1294 aa18.34■□□□□ 0.53
CHD3-214ENST00000572579 BPTFQ12830 3046 aa18.34■□□□□ 0.53
CHD3-214ENST00000572579 ADAMTS20P59510 1910 aa18.33■□□□□ 0.53
CHD3-214ENST00000572579 IGSF10Q6WRI0 2623 aa18.33■□□□□ 0.53
CHD3-214ENST00000572579 ZSCAN5CA6NGD5 496 aaPredicted RBP18.33■□□□□ 0.52
CHD3-214ENST00000572579 GCATO75600 419 aa18.33■□□□□ 0.52
CHD3-214ENST00000572579 PIGNO95427 931 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms