RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 TBC1D22AQ8WUA7 517 aa3.5□□□□□ -1.85
UBR1-209ENST00000569243 LRFN5Q96NI6 719 aa3.5□□□□□ -1.85
UBR1-209ENST00000569243 CLK4Q9HAZ1 481 aaKnown RBP3.5□□□□□ -1.85
UBR1-209ENST00000569243 CH25HO95992 272 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 TNNT1P13805 278 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 GYS1P13807 737 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 AMD1P17707 334 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 PNPLA4P41247 253 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 VEGFCP49767 419 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 ARL16Q0P5N6 197 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 UBE4AQ14139 1066 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 KRT72Q14CN4 511 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 RPE65Q16518 533 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 ACCSLQ4AC99 568 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 PLEKHO1Q53GL0 409 aaPredicted RBP3.49□□□□□ -1.85
UBR1-209ENST00000569243 XKR9Q5GH70 373 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 TYW3Q6IPR3 259 aaKnown RBP3.49□□□□□ -1.85
UBR1-209ENST00000569243 UNQ6126/PRO20091Q6UXV3 157 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 C9orf139Q6ZV77 190 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 TUBA1AQ71U36 451 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 SMIM29Q86T20 159 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 CACNA2D3Q8IZS8 1091 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 AADATQ8N5Z0 425 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 SORCS1Q8WY21 1168 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 NCSTNQ92542 709 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 SLC39A13Q96H72 371 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 UHRF2Q96PU4 802 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 EPYCQ99645 322 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 TUBA1CQ9BQE3 449 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 CRB3Q9BUF7 120 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 LHPPQ9H008 270 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 MVB12BQ9H7P6 319 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 EVA1AQ9H8M9 152 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 SDF2L1Q9HCN8 221 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 THAP1Q9NVV9 213 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 TMEM51Q9NW97 253 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 DACT1Q9NYF0 836 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 LRFN1Q9P244 771 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 PAM16Q9Y3D7 125 aa3.49□□□□□ -1.85
UBR1-209ENST00000569243 CPED1A4D0V7 1026 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 C17orf100A8MU93 164 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 PRAC2D3DTV9 90 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 WNT9BO14905 357 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 CSTBP04080 98 aaKnown RBP3.48□□□□□ -1.85
UBR1-209ENST00000569243 ACP5P13686 325 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 AZU1P20160 251 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 DGKAP23743 735 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 RPL3P39023 403 aaKnown RBP3.48□□□□□ -1.85
UBR1-209ENST00000569243 MTNR1AP48039 350 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 CHAF1AQ13111 956 aaPredicted RBP3.48□□□□□ -1.85
UBR1-209ENST00000569243 BLMHQ13867 455 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 LPIN1Q14693 890 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 SMAD1Q15797 465 aaKnown RBP3.48□□□□□ -1.85
UBR1-209ENST00000569243 CALCRLQ16602 461 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 FAM69BQ5VUD6 431 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 RETSATQ6NUM9 610 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 ZNF449Q6P9G9 518 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 RHBDF2Q6PJF5 856 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 PGBD5Q8N414 524 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 SAMD3Q8N6K7 520 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 RFWD2Q8NHY2 731 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 TRIB2Q92519 343 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 OTULINQ96BN8 352 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 C3orf49Q96BT1 292 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 SDCCAG3Q96C92 435 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 SCMH1Q96GD3 660 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 FEM1CQ96JP0 617 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 CLPBQ9H078 707 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 EBF2Q9HAK2 575 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 PLCB1Q9NQ66 1216 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 G6PC2Q9NQR9 355 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 ATP8A2Q9NTI2 1148 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 SMARCAL1Q9NZC9 954 aa3.48□□□□□ -1.85
UBR1-209ENST00000569243 IGHV4OR15-8A0A075B7B6 117 aa3.47□□□□□ -1.85
UBR1-209ENST00000569243 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.47□□□□□ -1.85
UBR1-209ENST00000569243 TARSL2A2RTX5 802 aaKnown RBP3.47□□□□□ -1.85
UBR1-209ENST00000569243 CLGNO14967 610 aa3.47□□□□□ -1.85
UBR1-209ENST00000569243 LYL1P12980 280 aa3.47□□□□□ -1.85
UBR1-209ENST00000569243 GM2AP17900 193 aa3.47□□□□□ -1.85
UBR1-209ENST00000569243 CST5P28325 142 aaPredicted RBP3.47□□□□□ -1.85
UBR1-209ENST00000569243 KRT2P35908 639 aa3.47□□□□□ -1.85
UBR1-209ENST00000569243 CYP4A11Q02928 519 aa3.47□□□□□ -1.85
UBR1-209ENST00000569243 MORC3Q14149 939 aa3.47□□□□□ -1.85
UBR1-209ENST00000569243 RUNDC3AQ59EK9 446 aa3.47□□□□□ -1.85
UBR1-209ENST00000569243 SYCP2LQ5T4T6 812 aa3.47□□□□□ -1.85
UBR1-209ENST00000569243 FAM122CQ6P4D5 195 aa3.47□□□□□ -1.85
UBR1-209ENST00000569243 CCDC129Q6ZRS4 1044 aa3.47□□□□□ -1.85
UBR1-209ENST00000569243 MYLK4Q86YV6 388 aaPredicted RBP3.47□□□□□ -1.85
UBR1-209ENST00000569243 DENND6AQ8IWF6 608 aa3.47□□□□□ -1.85
UBR1-209ENST00000569243 OR6Y1Q8NGX8 325 aa3.47□□□□□ -1.85
UBR1-209ENST00000569243 GPT2Q8TD30 523 aa3.47□□□□□ -1.85
UBR1-209ENST00000569243 DUX3Q96PT4 197 aa3.47□□□□□ -1.85
UBR1-209ENST00000569243 TRAPPC9Q96Q05 1148 aa3.47□□□□□ -1.85
UBR1-209ENST00000569243 MMP28Q9H239 520 aa3.47□□□□□ -1.85
UBR1-209ENST00000569243 ANKRD10Q9NXR5 420 aa3.47□□□□□ -1.85
UBR1-209ENST00000569243 ADAM18Q9Y3Q7 739 aa3.47□□□□□ -1.85
UBR1-209ENST00000569243 TAF1P21675 1872 aa3.47□□□□□ -1.85
UBR1-209ENST00000569243 TP53BP1Q12888 1972 aaPredicted RBP3.46□□□□□ -1.86
UBR1-209ENST00000569243 CCDC194A0A1B0GVG4 234 aa3.46□□□□□ -1.86
UBR1-209ENST00000569243 FAM172BPA6NC97 362 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms