RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 IGLV3-10A0A075B6K4 115 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 C16orf96A6NNT2 1141 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 I6L893 689 aaPredicted RBP11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 NVLO15381 856 aaKnown RBP11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 ZMPSTE24O75844 475 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 AFPP02771 609 aaKnown RBP11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 HGFP14210 728 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 CCKBRP32239 447 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 IGFALSP35858 605 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 PPP1R2P41236 205 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 CXCR3P49682 368 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 BLKP51451 505 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 SNX16P57768 344 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 ARF5P84085 180 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 PPARDQ03181 441 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 C1QBPQ07021 282 aaKnown RBP11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 ELOCQ15369 112 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 ZNF805Q5CZA5 627 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 MANEAQ5SRI9 462 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 PASD1Q8IV76 773 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 TRIM59Q8IWR1 403 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 PLPP6Q8IY26 295 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 FSTL5Q8N475 847 aaPredicted RBP11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 WDTC1Q8N5D0 677 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 ZSCAN1Q8NBB4 408 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 KYQ8NBH2 561 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 PCDH19Q8TAB3 1148 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 SPATA20Q8TB22 786 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 CCDC74AQ96AQ1 378 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 CENPTQ96BT3 561 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 C1orf74Q96LT6 269 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 NPY6RQ99463 290 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 C1QTNF7Q9BXJ2 289 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 CPEB1Q9BZB8 566 aaKnown RBP11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 TM6SF2Q9BZW4 377 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 SYNCQ9H7C4 482 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 ATP13A1Q9HD20 1204 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 HECAQ9UBI9 543 aaPredicted RBP11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 GULP1Q9UBP9 304 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 PISDQ9UG56 409 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 GGT7Q9UJ14 662 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 PNMA8BQ9ULN7 279 aaPredicted RBP11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 STAP1Q9ULZ2 295 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 ITM2BQ9Y287 266 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 FCF1Q9Y324 198 aaKnown RBP11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 PCDHGA4Q9Y5G9 962 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 ATP6V1DQ9Y5K8 247 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 SNX10Q9Y5X0 201 aa11.99□□□□□ -0.49
GTF3C1-209ENST00000568569 TOR1BO14657 336 aa11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 PPFIA2O75334 1257 aa11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 GNA14O95837 355 aa11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 ERBB2P04626 1255 aa11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 RPLP0P05388 317 aaKnown RBP11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 CELA2BP08218 269 aaPredicted RBP11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 ALPIP09923 528 aa11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 EIF4A3P38919 411 aaKnown RBP11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 SULT1E1P49888 294 aa11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 CCL7P80098 99 aa11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 SLC6A3Q01959 620 aa11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 TTI2Q6NXR4 508 aa11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 FOXR2Q6PJQ5 311 aa11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 LVRNQ6Q4G3 990 aa11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 VPS36Q86VN1 386 aa11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 FMR1NBQ8N0W7 255 aaPredicted RBP11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 SDR16C5Q8N3Y7 309 aa11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 RYBPQ8N488 228 aaPredicted RBP11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 C1orf131Q8NDD1 294 aaKnown RBP11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 ZNF397Q8NF99 534 aaPredicted RBP11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 OR6C4Q8NGE1 309 aa11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 ISG20Q96AZ6 181 aaKnown RBP11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 TMEM159Q96B96 161 aa11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 PGAP3Q96FM1 320 aaPredicted RBP11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 FAM81BQ96LP2 452 aa11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 TMEM51Q9NW97 253 aa11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 SIRPGQ9P1W8 387 aa11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 SEPT3Q9UH03 358 aa11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 RABGEF1Q9UJ41 708 aa11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 PCDHGC3Q9UN70 934 aa11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 LOXL2Q9Y4K0 774 aa11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 PCDHB11Q9Y5F2 797 aa11.98□□□□□ -0.49
GTF3C1-209ENST00000568569 FLNCQ14315 2725 aa11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 CXorf51AA0A1B0GTR3 108 aa11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 A0A1W2PQM1 296 aa11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 BECN2A8MW95 431 aa11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 AREL1O15033 823 aa11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 SRGAP2O75044 1071 aa11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 TM7SF2O76062 418 aa11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 F9P00740 461 aa11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 CTSEP14091 401 aa11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 TFE3P19532 575 aaPredicted RBP11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 GKP32189 559 aa11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 USP8P40818 1118 aa11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 HK3P52790 923 aa11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 MARSP56192 900 aaKnown RBP11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 GNA12Q03113 381 aa11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 TLE1Q04724 770 aa11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 DEUP1Q05D60 604 aa11.97□□□□□ -0.49
GTF3C1-209ENST00000568569 TBR1Q16650 682 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms