RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 TDRD12Q587J7 1177 aaKnown RBP17.93■□□□□ 0.46
NME3-205ENST00000563854 PLEKHA7Q6IQ23 1121 aa17.93■□□□□ 0.46
NME3-205ENST00000563854 KDM7AQ6ZMT4 941 aa17.93■□□□□ 0.46
NME3-205ENST00000563854 KANSL1Q7Z3B3 1105 aa17.93■□□□□ 0.46
NME3-205ENST00000563854 ABI3BPQ7Z7G0 1075 aa17.93■□□□□ 0.46
NME3-205ENST00000563854 PROSER1Q86XN7 944 aa17.93■□□□□ 0.46
NME3-205ENST00000563854 SLC22A18ASQ8N1D0 253 aa17.93■□□□□ 0.46
NME3-205ENST00000563854 RAB7BQ96AH8 199 aa17.93■□□□□ 0.46
NME3-205ENST00000563854 PEBP4Q96S96 227 aa17.93■□□□□ 0.46
NME3-205ENST00000563854 SNRNP25Q9BV90 132 aaKnown RBP17.93■□□□□ 0.46
NME3-205ENST00000563854 TRIM7Q9C029 511 aa17.93■□□□□ 0.46
NME3-205ENST00000563854 TTYH3Q9C0H2 523 aa17.93■□□□□ 0.46
NME3-205ENST00000563854 KLHL11Q9NVR0 708 aa17.93■□□□□ 0.46
NME3-205ENST00000563854 UBA2Q9UBT2 640 aaPredicted RBP17.93■□□□□ 0.46
NME3-205ENST00000563854 POM121BA6NF01 834 aa17.92■□□□□ 0.46
NME3-205ENST00000563854 WASH4PA8MWX3 477 aa17.92■□□□□ 0.46
NME3-205ENST00000563854 TAF4O00268 1085 aa17.92■□□□□ 0.46
NME3-205ENST00000563854 DDX3XO00571 662 aaKnown RBP eCLIP17.92■□□□□ 0.463e-7■■■■■ 28.4
NME3-205ENST00000563854 TSPAN6O43657 245 aa17.92■□□□□ 0.46
NME3-205ENST00000563854 SIGLEC6O43699 453 aa17.92■□□□□ 0.46
NME3-205ENST00000563854 XPAP23025 273 aaPredicted RBP17.92■□□□□ 0.46
NME3-205ENST00000563854 DGKAP23743 735 aa17.92■□□□□ 0.46
NME3-205ENST00000563854 DAB2P98082 770 aa17.92■□□□□ 0.46
NME3-205ENST00000563854 PPP6R3Q5H9R7 873 aaPredicted RBP17.92■□□□□ 0.46
NME3-205ENST00000563854 KYAT3Q6YP21 454 aaKnown RBP17.92■□□□□ 0.46
NME3-205ENST00000563854 TTC7BQ86TV6 843 aa17.92■□□□□ 0.46
NME3-205ENST00000563854 LUZP1Q86V48 1076 aa17.92■□□□□ 0.46
NME3-205ENST00000563854 UMODL1-AS1Q8N2C9 162 aa17.92■□□□□ 0.46
NME3-205ENST00000563854 CASKIN2Q8WXE0 1202 aa17.92■□□□□ 0.46
NME3-205ENST00000563854 BMFQ96LC9 184 aa17.92■□□□□ 0.46
NME3-205ENST00000563854 FUCA2Q9BTY2 467 aa17.92■□□□□ 0.46
NME3-205ENST00000563854 AIPL1Q9NZN9 384 aa17.92■□□□□ 0.46
NME3-205ENST00000563854 IPO11Q9UI26 975 aaKnown RBP17.92■□□□□ 0.46
NME3-205ENST00000563854 PCDHGA1Q9Y5H4 931 aa17.92■□□□□ 0.46
NME3-205ENST00000563854 ZZEF1O43149 2961 aa17.91■□□□□ 0.46
NME3-205ENST00000563854 TRABD2BA6NFA1 517 aa17.91■□□□□ 0.46
NME3-205ENST00000563854 TMEM191CA6NGB0 347 aa17.91■□□□□ 0.46
NME3-205ENST00000563854 TRIM38O00635 465 aa17.91■□□□□ 0.46
NME3-205ENST00000563854 FPGTO14772 594 aa17.91■□□□□ 0.46
NME3-205ENST00000563854 INSIG1O15503 277 aa17.91■□□□□ 0.46
NME3-205ENST00000563854 SPINT1O43278 529 aa17.91■□□□□ 0.46
NME3-205ENST00000563854 PRPSAP2O60256 369 aa17.91■□□□□ 0.46
NME3-205ENST00000563854 PIGNO95427 931 aa17.91■□□□□ 0.46
NME3-205ENST00000563854 JUPP14923 745 aa17.91■□□□□ 0.46
NME3-205ENST00000563854 CKMT2P17540 419 aa17.91■□□□□ 0.46
NME3-205ENST00000563854 HNF1BP35680 557 aa17.91■□□□□ 0.46
NME3-205ENST00000563854 PRKCIP41743 596 aa17.91■□□□□ 0.46
NME3-205ENST00000563854 INO80DQ53TQ3 878 aaPredicted RBP17.91■□□□□ 0.46
NME3-205ENST00000563854 ERMARDQ5T6L9 678 aa17.91■□□□□ 0.46
NME3-205ENST00000563854 HES3Q5TGS1 186 aa17.91■□□□□ 0.46
NME3-205ENST00000563854 VPS36Q86VN1 386 aa17.91■□□□□ 0.46
NME3-205ENST00000563854 TMPRSS12Q86WS5 348 aa17.91■□□□□ 0.46
NME3-205ENST00000563854 SLC25A45Q8N413 288 aa17.91■□□□□ 0.46
NME3-205ENST00000563854 CXorf40AQ8TE69 158 aa17.91■□□□□ 0.46
NME3-205ENST00000563854 ARHGEF26Q96DR7 871 aa17.91■□□□□ 0.46
NME3-205ENST00000563854 KCTD15Q96SI1 283 aaPredicted RBP17.91■□□□□ 0.46
NME3-205ENST00000563854 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.91■□□□□ 0.46
NME3-205ENST00000563854 WRAP53Q9BUR4 548 aaKnown RBP17.91■□□□□ 0.46
NME3-205ENST00000563854 CBX8Q9HC52 389 aa17.91■□□□□ 0.46
NME3-205ENST00000563854 LHX3Q9UBR4 397 aa17.91■□□□□ 0.46
NME3-205ENST00000563854 HS3ST3A1Q9Y663 406 aa17.91■□□□□ 0.46
NME3-205ENST00000563854 SCINQ9Y6U3 715 aa17.91■□□□□ 0.46
NME3-205ENST00000563854 FREM2Q5SZK8 3169 aa17.91■□□□□ 0.46
NME3-205ENST00000563854 TRPM6Q9BX84 2022 aa17.9■□□□□ 0.46
NME3-205ENST00000563854 J3KR12 359 aa17.9■□□□□ 0.46
NME3-205ENST00000563854 MMP20O60882 483 aa17.9■□□□□ 0.46
NME3-205ENST00000563854 PIAS2O75928 621 aa17.9■□□□□ 0.46
NME3-205ENST00000563854 ITIH2P19823 946 aa17.9■□□□□ 0.46
NME3-205ENST00000563854 MIPP30301 263 aa17.9■□□□□ 0.46
NME3-205ENST00000563854 HTR7P34969 479 aa17.9■□□□□ 0.46
NME3-205ENST00000563854 PAPOLAP51003 745 aaKnown RBP17.9■□□□□ 0.46
NME3-205ENST00000563854 FANCCQ00597 558 aa17.9■□□□□ 0.46
NME3-205ENST00000563854 CYP4F3Q08477 520 aa17.9■□□□□ 0.46
NME3-205ENST00000563854 PDE1CQ14123 709 aaPredicted RBP17.9■□□□□ 0.46
NME3-205ENST00000563854 NR1I3Q14994 352 aa17.9■□□□□ 0.46
NME3-205ENST00000563854 CYTH1Q15438 398 aa17.9■□□□□ 0.46
NME3-205ENST00000563854 CFAP58Q5T655 872 aa17.9■□□□□ 0.46
NME3-205ENST00000563854 RFX8Q6ZV50 586 aa17.9■□□□□ 0.46
NME3-205ENST00000563854 ZSCAN30Q86W11 494 aa17.9■□□□□ 0.46
NME3-205ENST00000563854 ARFGAP1Q8N6T3 406 aa17.9■□□□□ 0.46
NME3-205ENST00000563854 PAF1Q8N7H5 531 aa17.9■□□□□ 0.46
NME3-205ENST00000563854 TSC1Q92574 1164 aa17.9■□□□□ 0.46
NME3-205ENST00000563854 TRIM11Q96F44 468 aa17.9■□□□□ 0.46
NME3-205ENST00000563854 C1QTNF2Q9BXJ5 285 aa17.9■□□□□ 0.46
NME3-205ENST00000563854 SLC39A8Q9C0K1 460 aa17.9■□□□□ 0.46
NME3-205ENST00000563854 LRRC19Q9H756 370 aa17.9■□□□□ 0.46
NME3-205ENST00000563854 DONSONQ9NYP3 566 aa17.9■□□□□ 0.46
NME3-205ENST00000563854 ARHGAP42A6NI28 874 aa17.89■□□□□ 0.45
NME3-205ENST00000563854 DFFAO00273 331 aa17.89■□□□□ 0.45
NME3-205ENST00000563854 CAPNS1P04632 268 aa17.89■□□□□ 0.45
NME3-205ENST00000563854 C1SP09871 688 aa17.89■□□□□ 0.45
NME3-205ENST00000563854 ALPPL2P10696 532 aa17.89■□□□□ 0.45
NME3-205ENST00000563854 GZMAP12544 262 aa17.89■□□□□ 0.45
NME3-205ENST00000563854 RABIFP47224 123 aa17.89■□□□□ 0.45
NME3-205ENST00000563854 NDST2P52849 883 aa17.89■□□□□ 0.45
NME3-205ENST00000563854 ZNF211Q13398 564 aaPredicted RBP17.89■□□□□ 0.45
NME3-205ENST00000563854 FZD2Q14332 565 aa17.89■□□□□ 0.45
NME3-205ENST00000563854 PROX2Q3B8N5 592 aa17.89■□□□□ 0.45
NME3-205ENST00000563854 PARGQ86W56 976 aa17.89■□□□□ 0.45
NME3-205ENST00000563854 DCP2Q8IU60 420 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms