RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 SPATA2Q9UM82 520 aa11.15□□□□□ -0.62
SEMA4B-204ENST00000558065 SORCS3Q9UPU3 1222 aa11.15□□□□□ -0.62
SEMA4B-204ENST00000558065 NID2Q14112 1375 aa11.15□□□□□ -0.62
SEMA4B-204ENST00000558065 HACD1B0YJ81 288 aa11.15□□□□□ -0.62
SEMA4B-204ENST00000558065 I3L521 148 aa11.15□□□□□ -0.62
SEMA4B-204ENST00000558065 KLF11O14901 512 aa11.15□□□□□ -0.62
SEMA4B-204ENST00000558065 SORBS3O60504 671 aa11.15□□□□□ -0.62
SEMA4B-204ENST00000558065 HOXB7P09629 217 aa11.15□□□□□ -0.62
SEMA4B-204ENST00000558065 HLA-FP30511 346 aa11.15□□□□□ -0.62
SEMA4B-204ENST00000558065 PPP5CP53041 499 aa11.15□□□□□ -0.62
SEMA4B-204ENST00000558065 AQP5P55064 265 aa11.15□□□□□ -0.62
SEMA4B-204ENST00000558065 ZNF273Q14593 569 aa11.15□□□□□ -0.62
SEMA4B-204ENST00000558065 VWA5B1Q5TIE3 1220 aa11.15□□□□□ -0.62
SEMA4B-204ENST00000558065 CYP4F22Q6NT55 531 aa11.15□□□□□ -0.62
SEMA4B-204ENST00000558065 KCNT2Q6UVM3 1135 aa11.15□□□□□ -0.62
SEMA4B-204ENST00000558065 FRMD7Q6ZUT3 714 aa11.15□□□□□ -0.62
SEMA4B-204ENST00000558065 TFAP2DQ7Z6R9 452 aa11.15□□□□□ -0.62
SEMA4B-204ENST00000558065 OR6Q1Q8NGQ2 317 aa11.15□□□□□ -0.62
SEMA4B-204ENST00000558065 PPP1R13LQ8WUF5 828 aa11.15□□□□□ -0.62
SEMA4B-204ENST00000558065 KCNK16Q96T55 309 aa11.15□□□□□ -0.62
SEMA4B-204ENST00000558065 EVA1BQ9NVM1 165 aa11.15□□□□□ -0.62
SEMA4B-204ENST00000558065 ALKQ9UM73 1620 aa11.15□□□□□ -0.62
SEMA4B-204ENST00000558065 AP3D1O14617 1153 aa11.15□□□□□ -0.63
SEMA4B-204ENST00000558065 HOXA2O43364 376 aa11.15□□□□□ -0.63
SEMA4B-204ENST00000558065 GGPS1O95749 300 aa11.15□□□□□ -0.63
SEMA4B-204ENST00000558065 SLC4A1P02730 911 aa11.15□□□□□ -0.63
SEMA4B-204ENST00000558065 ATP5BP06576 529 aaKnown RBP11.15□□□□□ -0.63
SEMA4B-204ENST00000558065 RBP1P09455 135 aa11.15□□□□□ -0.63
SEMA4B-204ENST00000558065 AIF1P55008 147 aa11.15□□□□□ -0.63
SEMA4B-204ENST00000558065 TBX4P57082 545 aa11.15□□□□□ -0.63
SEMA4B-204ENST00000558065 SLC18A2Q05940 514 aa11.15□□□□□ -0.63
SEMA4B-204ENST00000558065 BAMBIQ13145 260 aa11.15□□□□□ -0.63
SEMA4B-204ENST00000558065 ARID3BQ8IVW6 561 aaPredicted RBP11.15□□□□□ -0.63
SEMA4B-204ENST00000558065 CCDC116Q8IYX3 515 aa11.15□□□□□ -0.63
SEMA4B-204ENST00000558065 IGDCC4Q8TDY8 1250 aa11.15□□□□□ -0.63
SEMA4B-204ENST00000558065 UTP15Q8TED0 518 aaKnown RBP11.15□□□□□ -0.63
SEMA4B-204ENST00000558065 KLHL15Q96M94 604 aa11.15□□□□□ -0.63
SEMA4B-204ENST00000558065 C19orf43Q9BQ61 176 aa11.15□□□□□ -0.63
SEMA4B-204ENST00000558065 UCK2Q9BZX2 261 aa11.15□□□□□ -0.63
SEMA4B-204ENST00000558065 ZC3H12CQ9C0D7 883 aaKnown RBP11.15□□□□□ -0.63
SEMA4B-204ENST00000558065 TOR3AQ9H497 397 aa11.15□□□□□ -0.63
SEMA4B-204ENST00000558065 SAV1Q9H4B6 383 aaPredicted RBP11.15□□□□□ -0.63
SEMA4B-204ENST00000558065 LY9Q9HBG7 655 aa11.15□□□□□ -0.63
SEMA4B-204ENST00000558065 HRH3Q9Y5N1 445 aa11.15□□□□□ -0.63
SEMA4B-204ENST00000558065 TMEM238LA0A1B0GVL6 79 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 A0A1W2PRG6 482 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 DLGAP1O14490 977 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 ZBTB5O15062 677 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 GPAA1O43292 621 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 PRKD3O94806 890 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 BMP1P13497 986 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 PLS3P13797 630 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 GALCP54803 685 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 PAGE2BQ5JRK9 111 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 GPATCH4Q5T3I0 446 aaKnown RBP11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 NXNL2Q5VZ03 156 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 RINT1Q6NUQ1 792 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 MAMDC4Q6UXC1 1216 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 ZNF767PQ75MW2 155 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 CHST15Q7LFX5 561 aaPredicted RBP11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 SLCO6A1Q86UG4 719 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 C12orf56Q8IXR9 622 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 COLGALT2Q8IYK4 626 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 LRRC47Q8N1G4 583 aaKnown RBP11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 CAMKK1Q8N5S9 505 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 ST13P5Q8NFI4 369 aaPredicted RBP11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 UFD1Q92890 307 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 RADILQ96JH8 1075 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 WNT5BQ9H1J7 359 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 ABCB10Q9NRK6 738 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 DERAQ9Y315 318 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 MROH5Q6ZUA9 1318 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 SLC22A2O15244 555 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 UGT2B11O75310 529 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 TRIM16O95361 564 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 APOC1P02654 83 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 JUNBP17275 347 aaPredicted RBP11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 GDI2P50395 445 aaKnown RBP11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 DUSP4Q13115 394 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 HIST2H2ACQ16777 129 aaPredicted RBP11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 TYSND1Q2T9J0 566 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 ZBTB41Q5SVQ8 909 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 DPY19L2P1Q6NXN4 242 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 PTAR1Q7Z6K3 402 aaPredicted RBP11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 SGMS1Q86VZ5 419 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 TBC1D10CQ8IV04 446 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 SLC9A9Q8IVB4 645 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 PSMA8Q8TAA3 256 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 PDXPQ96GD0 296 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 ROGDIQ9GZN7 287 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 RNPEPQ9H4A4 650 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 LRRC19Q9H756 370 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 UBE4BO95155 1302 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 CIB4A0PJX0 185 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 MINDY4BA8MYZ0 360 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 GMDSO60547 372 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 GLAP06280 429 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 SEPHS1P49903 392 aa11.14□□□□□ -0.63
SEMA4B-204ENST00000558065 ZBTB37Q5TC79 503 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms