RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 APLFQ8IW19 511 aaPredicted RBP9.57□□□□□ -0.88
NEDD1-211ENST00000557454 CHST14Q8NCH0 376 aa9.57□□□□□ -0.88
NEDD1-211ENST00000557454 TMIEQ8NEW7 156 aa9.57□□□□□ -0.88
NEDD1-211ENST00000557454 RNF34Q969K3 372 aa9.57□□□□□ -0.88
NEDD1-211ENST00000557454 DNAJC19Q96DA6 116 aa9.57□□□□□ -0.88
NEDD1-211ENST00000557454 SNRNP40Q96DI7 357 aaKnown RBP9.57□□□□□ -0.88
NEDD1-211ENST00000557454 TEFMQ96QE5 360 aaKnown RBP9.57□□□□□ -0.88
NEDD1-211ENST00000557454 MDFIQ99750 246 aa9.57□□□□□ -0.88
NEDD1-211ENST00000557454 DDX50Q9BQ39 737 aaKnown RBP9.57□□□□□ -0.88
NEDD1-211ENST00000557454 SLC25A23Q9BV35 468 aa9.57□□□□□ -0.88
NEDD1-211ENST00000557454 NT5C1AQ9BXI3 368 aa9.57□□□□□ -0.88
NEDD1-211ENST00000557454 C1QTNF2Q9BXJ5 285 aa9.57□□□□□ -0.88
NEDD1-211ENST00000557454 TRIM8Q9BZR9 551 aa9.57□□□□□ -0.88
NEDD1-211ENST00000557454 NPDC1Q9NQX5 325 aaPredicted RBP9.57□□□□□ -0.88
NEDD1-211ENST00000557454 ASF1BQ9NVP2 202 aa9.57□□□□□ -0.88
NEDD1-211ENST00000557454 CROTQ9UKG9 612 aa9.57□□□□□ -0.88
NEDD1-211ENST00000557454 FADS3Q9Y5Q0 445 aa9.57□□□□□ -0.88
NEDD1-211ENST00000557454 RPS6KL1Q9Y6S9 549 aa9.57□□□□□ -0.88
NEDD1-211ENST00000557454 YJEFN3A6XGL0 299 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 B4E171 279 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 E7ENQ6 273 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 TULP2O00295 520 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 SPTLC2O15270 562 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 NUDT21O43809 227 aaKnown RBP9.56□□□□□ -0.88
NEDD1-211ENST00000557454 LRCH4O75427 683 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 STK17BO94768 372 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 MOCS2O96007 188 aaPredicted RBP9.56□□□□□ -0.88
NEDD1-211ENST00000557454 ADRB3P13945 408 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 TSPAN7P41732 249 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 CYP2J2P51589 502 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 LIMK2P53671 638 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 HDAC4P56524 1084 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 PER3P56645 1201 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 TBX4P57082 545 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 KRTAP10-9P60411 292 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 CDK18Q07002 472 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 INCA1Q0VD86 236 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 CHAF1BQ13112 559 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 SEMA5AQ13591 1074 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 TRA2AQ13595 282 aaKnown RBP eCLIP9.56□□□□□ -0.88
NEDD1-211ENST00000557454 CPZQ66K79 652 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 SLC6A19Q695T7 634 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 VPS36Q86VN1 386 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 LGI2Q8N0V4 545 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 SH2D3CQ8N5H7 860 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 BMPERQ8N8U9 685 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 GLIS1Q8NBF1 620 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 OR2A12Q8NGT7 310 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 PLEKHO2Q8TD55 490 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 KCTD13Q8WZ19 329 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 RNF31Q96EP0 1072 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 AK8Q96MA6 479 aa9.56□□□□□ -0.88
NEDD1-211ENST00000557454 XPO7Q9UIA9 1087 aaKnown RBP9.56□□□□□ -0.88
NEDD1-211ENST00000557454 SNPHO15079 494 aa9.55□□□□□ -0.88
NEDD1-211ENST00000557454 INPP4BO15327 924 aa9.55□□□□□ -0.88
NEDD1-211ENST00000557454 PRICKLE3O43900 615 aaPredicted RBP9.55□□□□□ -0.88
NEDD1-211ENST00000557454 RASGRP1O95267 797 aa9.55□□□□□ -0.88
NEDD1-211ENST00000557454 DLGAP3O95886 979 aa9.55□□□□□ -0.88
NEDD1-211ENST00000557454 PRNPP04156 253 aa9.55□□□□□ -0.88
NEDD1-211ENST00000557454 C8BP07358 591 aa9.55□□□□□ -0.88
NEDD1-211ENST00000557454 THRAP10827 490 aa9.55□□□□□ -0.88
NEDD1-211ENST00000557454 CD99P14209 185 aa9.55□□□□□ -0.88
NEDD1-211ENST00000557454 CD1EP15812 388 aa9.55□□□□□ -0.88
NEDD1-211ENST00000557454 CD58P19256 250 aa9.55□□□□□ -0.88
NEDD1-211ENST00000557454 GJB2P29033 226 aa9.55□□□□□ -0.88
NEDD1-211ENST00000557454 ALDH4A1P30038 563 aa9.55□□□□□ -0.88
NEDD1-211ENST00000557454 DLSTP36957 453 aa9.55□□□□□ -0.88
NEDD1-211ENST00000557454 YPEL5P62699 121 aa9.55□□□□□ -0.88
NEDD1-211ENST00000557454 ADIGQ0VDE8 80 aa9.55□□□□□ -0.88
NEDD1-211ENST00000557454 SLC12A1Q13621 1099 aa9.55□□□□□ -0.88
NEDD1-211ENST00000557454 KCTD16Q68DU8 428 aa9.55□□□□□ -0.88
NEDD1-211ENST00000557454 MSANTD2Q6P1R3 559 aa9.55□□□□□ -0.88
NEDD1-211ENST00000557454 OGFOD3Q6PK18 319 aa9.55□□□□□ -0.88
NEDD1-211ENST00000557454 FAM46DQ8NEK8 389 aa9.55□□□□□ -0.88
NEDD1-211ENST00000557454 AZIN2Q96A70 460 aa9.55□□□□□ -0.88
NEDD1-211ENST00000557454 CENPTQ96BT3 561 aa9.55□□□□□ -0.88
NEDD1-211ENST00000557454 PPP1R16AQ96I34 528 aa9.55□□□□□ -0.88
NEDD1-211ENST00000557454 FCRL2Q96LA5 508 aaPredicted RBP9.55□□□□□ -0.88
NEDD1-211ENST00000557454 IPO9Q96P70 1041 aaKnown RBP9.55□□□□□ -0.88
NEDD1-211ENST00000557454 TMUB1Q9BVT8 246 aa9.55□□□□□ -0.88
NEDD1-211ENST00000557454 TWSG1Q9GZX9 223 aa9.55□□□□□ -0.88
NEDD1-211ENST00000557454 TRIT1Q9H3H1 467 aaKnown RBP9.55□□□□□ -0.88
NEDD1-211ENST00000557454 MLXIPLQ9NP71 852 aa9.55□□□□□ -0.88
NEDD1-211ENST00000557454 ABCC13Q9NSE7 274 aa9.55□□□□□ -0.88
NEDD1-211ENST00000557454 TMEM9Q9P0T7 183 aa9.55□□□□□ -0.88
NEDD1-211ENST00000557454 ITM2BQ9Y287 266 aa9.55□□□□□ -0.88
NEDD1-211ENST00000557454 TMEM184BQ9Y519 407 aaPredicted RBP9.55□□□□□ -0.88
NEDD1-211ENST00000557454 PCDHGA9Q9Y5G4 932 aaKnown RBP9.55□□□□□ -0.88
NEDD1-211ENST00000557454 ZSCAN5CA6NGD5 496 aaPredicted RBP9.54□□□□□ -0.88
NEDD1-211ENST00000557454 CLIC2O15247 247 aa9.54□□□□□ -0.88
NEDD1-211ENST00000557454 LEFTY1O75610 366 aa9.54□□□□□ -0.88
NEDD1-211ENST00000557454 MT-CO1P00395 513 aa9.54□□□□□ -0.88
NEDD1-211ENST00000557454 SRCP12931 536 aa9.54□□□□□ -0.88
NEDD1-211ENST00000557454 COX6B1P14854 86 aa9.54□□□□□ -0.88
NEDD1-211ENST00000557454 CD1CP29017 333 aa9.54□□□□□ -0.88
NEDD1-211ENST00000557454 CSF2RBP32927 897 aa9.54□□□□□ -0.88
NEDD1-211ENST00000557454 HOXD13P35453 343 aa9.54□□□□□ -0.88
NEDD1-211ENST00000557454 ITGA1P56199 1179 aa9.54□□□□□ -0.88
NEDD1-211ENST00000557454 MAZP56270 477 aaKnown RBP9.54□□□□□ -0.88
NEDD1-211ENST00000557454 DPYDQ12882 1025 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms