RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 SHCBP1Q8NEM2 672 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 P2RY11Q96G91 374 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 KCTD15Q96SI1 283 aaPredicted RBP7.86□□□□□ -1.15
CHD8-209ENST00000555935 AGAP2Q99490 1192 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 RHOBTB2Q9BYZ6 727 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 C2orf40Q9H1Z8 148 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 TSPAN16Q9UKR8 245 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 CPQQ9Y646 472 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 BBIP1A8MTZ0 92 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 F5H423 210 aaPredicted RBP7.86□□□□□ -1.15
CHD8-209ENST00000555935 KDM1AO60341 852 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 NRP2O60462 931 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 DLX3O60479 287 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 SEC14L2O76054 403 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 SEC24DO94855 1032 aaPredicted RBP7.86□□□□□ -1.15
CHD8-209ENST00000555935 OXSR1O95747 527 aaPredicted RBP7.86□□□□□ -1.15
CHD8-209ENST00000555935 MYL3P08590 195 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 CYP2C9P11712 490 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 ATP6V1B2P21281 511 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 LRPAP1P30533 357 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 IREB2P48200 963 aaKnown RBP7.86□□□□□ -1.15
CHD8-209ENST00000555935 CCT8P50990 548 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 ATP4BP51164 291 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 DNAJB13P59910 316 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 ATP6V0D1P61421 351 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 INCA1Q0VD86 236 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 SNX17Q15036 470 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 TARBP2Q15633 366 aaKnown RBP7.86□□□□□ -1.15
CHD8-209ENST00000555935 SMAD1Q15797 465 aaKnown RBP7.86□□□□□ -1.15
CHD8-209ENST00000555935 SPATS1Q496A3 300 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 ZNF362Q5T0B9 420 aaPredicted RBP7.86□□□□□ -1.15
CHD8-209ENST00000555935 THOC7Q6I9Y2 204 aaKnown RBP7.86□□□□□ -1.15
CHD8-209ENST00000555935 SLC2A7Q6PXP3 512 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 KCNMB4Q86W47 210 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 TTC30BQ8N4P2 665 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 C1orf127Q8N9H9 656 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 LEMD2Q8NC56 503 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 HMGCLL1Q8TB92 370 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 SPPL2BQ8TCT7 592 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 CYGBQ8WWM9 190 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 CENPIQ92674 756 aaPredicted RBP7.86□□□□□ -1.15
CHD8-209ENST00000555935 CCDC97Q96F63 343 aaPredicted RBP7.86□□□□□ -1.15
CHD8-209ENST00000555935 MAGED4Q96JG8 741 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 HGH1Q9BTY7 390 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 SEZ6LQ9BYH1 1024 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 NAA50Q9GZZ1 169 aaKnown RBP7.86□□□□□ -1.15
CHD8-209ENST00000555935 TSPYL2Q9H2G4 693 aaPredicted RBP7.86□□□□□ -1.15
CHD8-209ENST00000555935 RHOJQ9H4E5 214 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 NANOGQ9H9S0 305 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 TRPV5Q9NQA5 729 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 NRBP2Q9NSY0 501 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 RNF146Q9NTX7 359 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 SMPD3Q9NY59 655 aaPredicted RBP7.86□□□□□ -1.15
CHD8-209ENST00000555935 ZNF70Q9UC06 446 aaPredicted RBP7.86□□□□□ -1.15
CHD8-209ENST00000555935 DAPK2Q9UIK4 370 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 SLC39A10Q9ULF5 831 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 RUVBL2Q9Y230 463 aaKnown RBP7.86□□□□□ -1.15
CHD8-209ENST00000555935 HES2Q9Y543 173 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 RAD54BQ9Y620 910 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 USP3Q9Y6I4 520 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 WDR81Q562E7 1941 aa7.86□□□□□ -1.15
CHD8-209ENST00000555935 CNTNAP1P78357 1384 aa7.85□□□□□ -1.15
CHD8-209ENST00000555935 C1orf232A0A0U1RR37 186 aa7.85□□□□□ -1.15
CHD8-209ENST00000555935 ERI2A8K979 691 aaKnown RBP7.85□□□□□ -1.15
CHD8-209ENST00000555935 CLDN25C9JDP6 229 aa7.85□□□□□ -1.15
CHD8-209ENST00000555935 MAFO75444 373 aaPredicted RBP7.85□□□□□ -1.15
CHD8-209ENST00000555935 GPIP06744 558 aa7.85□□□□□ -1.15
CHD8-209ENST00000555935 PFKMP08237 780 aa7.85□□□□□ -1.15
CHD8-209ENST00000555935 MBL2P11226 248 aaPredicted RBP7.85□□□□□ -1.15
CHD8-209ENST00000555935 CYP3A5P20815 502 aa7.85□□□□□ -1.15
CHD8-209ENST00000555935 EPHX2P34913 555 aa7.85□□□□□ -1.15
CHD8-209ENST00000555935 SCNN1AP37088 669 aa7.85□□□□□ -1.15
CHD8-209ENST00000555935 KPNA2P52292 529 aaKnown RBP7.85□□□□□ -1.15
CHD8-209ENST00000555935 SLC7A2P52569 658 aa7.85□□□□□ -1.15
CHD8-209ENST00000555935 GNA12Q03113 381 aa7.85□□□□□ -1.15
CHD8-209ENST00000555935 NME3Q13232 169 aa7.85□□□□□ -1.15
CHD8-209ENST00000555935 NEDD8Q15843 81 aa7.85□□□□□ -1.15
CHD8-209ENST00000555935 NDUFA5Q16718 116 aa7.85□□□□□ -1.15
CHD8-209ENST00000555935 IER5Q5VY09 327 aa7.85□□□□□ -1.15
CHD8-209ENST00000555935 LCN8Q6JVE9 175 aa7.85□□□□□ -1.15
CHD8-209ENST00000555935 NEPROQ6NW34 567 aa7.85□□□□□ -1.15
CHD8-209ENST00000555935 USP51Q70EK9 711 aa7.85□□□□□ -1.15
CHD8-209ENST00000555935 SLC26A9Q7LBE3 791 aa7.85□□□□□ -1.15
CHD8-209ENST00000555935 FSTL5Q8N475 847 aaPredicted RBP7.85□□□□□ -1.15
CHD8-209ENST00000555935 SNX31Q8N9S9 440 aa7.85□□□□□ -1.15
CHD8-209ENST00000555935 KHSRPQ92945 711 aaKnown RBP eCLIP7.85□□□□□ -1.151e-9■■■□□ 16.6
CHD8-209ENST00000555935 ALPK1Q96QP1 1244 aa7.85□□□□□ -1.15
CHD8-209ENST00000555935 LGMNQ99538 433 aa7.85□□□□□ -1.15
CHD8-209ENST00000555935 HOPXQ9BPY8 73 aaPredicted RBP7.85□□□□□ -1.15
CHD8-209ENST00000555935 C11orf84Q9BUA3 381 aaPredicted RBP7.85□□□□□ -1.15
CHD8-209ENST00000555935 WDR12Q9GZL7 423 aaKnown RBP7.85□□□□□ -1.15
CHD8-209ENST00000555935 RAD21L1Q9H4I0 556 aa7.85□□□□□ -1.15
CHD8-209ENST00000555935 RPF1Q9H9Y2 349 aaKnown RBP7.85□□□□□ -1.15
CHD8-209ENST00000555935 MEAF6Q9HAF1 191 aa7.85□□□□□ -1.15
CHD8-209ENST00000555935 ZFYVE28Q9HCC9 887 aa7.85□□□□□ -1.15
CHD8-209ENST00000555935 HMG20AQ9NP66 347 aa7.85□□□□□ -1.15
CHD8-209ENST00000555935 CASS4Q9NQ75 786 aa7.85□□□□□ -1.15
CHD8-209ENST00000555935 TBC1D13Q9NVG8 400 aa7.85□□□□□ -1.15
CHD8-209ENST00000555935 MTF2Q9Y483 593 aaPredicted RBP7.85□□□□□ -1.15
CHD8-209ENST00000555935 FER1L6Q2WGJ9 1857 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms