RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 KYQ8NBH2 561 aa11.58□□□□□ -0.56
SUPT16H-202ENST00000552829 DENND6BQ8NEG7 585 aa11.58□□□□□ -0.56
SUPT16H-202ENST00000552829 CENPTQ96BT3 561 aa11.58□□□□□ -0.56
SUPT16H-202ENST00000552829 PAGE5Q96GU1 130 aa11.58□□□□□ -0.56
SUPT16H-202ENST00000552829 CCDC114Q96M63 670 aa11.58□□□□□ -0.56
SUPT16H-202ENST00000552829 MIS12Q9H081 205 aa11.58□□□□□ -0.56
SUPT16H-202ENST00000552829 LRRN3Q9H3W5 708 aa11.58□□□□□ -0.56
SUPT16H-202ENST00000552829 SYNDIG1Q9H7V2 258 aa11.58□□□□□ -0.56
SUPT16H-202ENST00000552829 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.58□□□□□ -0.56
SUPT16H-202ENST00000552829 KIAA1468Q9P260 1216 aa11.58□□□□□ -0.56
SUPT16H-202ENST00000552829 VPS28Q9UK41 221 aa11.58□□□□□ -0.56
SUPT16H-202ENST00000552829 PCDHB11Q9Y5F2 797 aa11.58□□□□□ -0.56
SUPT16H-202ENST00000552829 POLQO75417 2590 aa11.58□□□□□ -0.56
SUPT16H-202ENST00000552829 IGLON5A6NGN9 336 aa11.57□□□□□ -0.56
SUPT16H-202ENST00000552829 RNF225M0QZC1 329 aaPredicted RBP11.57□□□□□ -0.56
SUPT16H-202ENST00000552829 SART1O43290 800 aaKnown RBP11.57□□□□□ -0.56
SUPT16H-202ENST00000552829 SNAP91O60641 907 aa11.57□□□□□ -0.56
SUPT16H-202ENST00000552829 LEFTY1O75610 366 aa11.57□□□□□ -0.56
SUPT16H-202ENST00000552829 RPLP0P05388 317 aaKnown RBP11.57□□□□□ -0.56
SUPT16H-202ENST00000552829 RRM1P23921 792 aa11.57□□□□□ -0.56
SUPT16H-202ENST00000552829 ITGB7P26010 798 aa11.57□□□□□ -0.56
SUPT16H-202ENST00000552829 L1CAMP32004 1257 aa11.57□□□□□ -0.56
SUPT16H-202ENST00000552829 ARSDP51689 593 aa11.57□□□□□ -0.56
SUPT16H-202ENST00000552829 AUHQ13825 339 aaKnown RBP11.57□□□□□ -0.56
SUPT16H-202ENST00000552829 STILQ15468 1287 aa11.57□□□□□ -0.56
SUPT16H-202ENST00000552829 CBWD6Q4V339 395 aa11.57□□□□□ -0.56
SUPT16H-202ENST00000552829 CBWD3Q5JTY5 395 aa11.57□□□□□ -0.56
SUPT16H-202ENST00000552829 CBWD5Q5RIA9 395 aa11.57□□□□□ -0.56
SUPT16H-202ENST00000552829 DPY19L3Q6ZPD9 716 aa11.57□□□□□ -0.56
SUPT16H-202ENST00000552829 C11orf57Q6ZUT1 292 aaPredicted RBP11.57□□□□□ -0.56
SUPT16H-202ENST00000552829 SLITRK4Q8IW52 837 aa11.57□□□□□ -0.56
SUPT16H-202ENST00000552829 PTCD2Q8WV60 388 aaKnown RBP11.57□□□□□ -0.56
SUPT16H-202ENST00000552829 NKD1Q969G9 470 aa11.57□□□□□ -0.56
SUPT16H-202ENST00000552829 RNF34Q969K3 372 aa11.57□□□□□ -0.56
SUPT16H-202ENST00000552829 FAM149B1Q96BN6 582 aa11.57□□□□□ -0.56
SUPT16H-202ENST00000552829 CPEB1Q9BZB8 566 aaKnown RBP11.57□□□□□ -0.56
SUPT16H-202ENST00000552829 SLC13A1Q9BZW2 595 aa11.57□□□□□ -0.56
SUPT16H-202ENST00000552829 GULP1Q9UBP9 304 aa11.57□□□□□ -0.56
SUPT16H-202ENST00000552829 IL36AQ9UHA7 158 aa11.57□□□□□ -0.56
SUPT16H-202ENST00000552829 VPS51Q9UID3 782 aa11.57□□□□□ -0.56
SUPT16H-202ENST00000552829 PRRC2CQ9Y520 2896 aaKnown RBP11.57□□□□□ -0.56
SUPT16H-202ENST00000552829 CHD5Q8TDI0 1954 aa11.56□□□□□ -0.56
SUPT16H-202ENST00000552829 M0QYV0 167 aa11.56□□□□□ -0.56
SUPT16H-202ENST00000552829 CLDN11O75508 207 aa11.56□□□□□ -0.56
SUPT16H-202ENST00000552829 RPL13P26373 211 aaKnown RBP11.56□□□□□ -0.56
SUPT16H-202ENST00000552829 NOS2P35228 1153 aa11.56□□□□□ -0.56
SUPT16H-202ENST00000552829 YPEL5P62699 121 aa11.56□□□□□ -0.56
SUPT16H-202ENST00000552829 SGCGQ13326 291 aa11.56□□□□□ -0.56
SUPT16H-202ENST00000552829 ADAM9Q13443 819 aa11.56□□□□□ -0.56
SUPT16H-202ENST00000552829 PTK2BQ14289 1009 aa11.56□□□□□ -0.56
SUPT16H-202ENST00000552829 FAXCQ5TGI0 409 aa11.56□□□□□ -0.56
SUPT16H-202ENST00000552829 C22orf39Q6P5X5 142 aa11.56□□□□□ -0.56
SUPT16H-202ENST00000552829 TMPRSS9Q7Z410 1059 aa11.56□□□□□ -0.56
SUPT16H-202ENST00000552829 FSTL5Q8N475 847 aaPredicted RBP11.56□□□□□ -0.56
SUPT16H-202ENST00000552829 ATP11CQ8NB49 1132 aa11.56□□□□□ -0.56
SUPT16H-202ENST00000552829 OR6C4Q8NGE1 309 aa11.56□□□□□ -0.56
SUPT16H-202ENST00000552829 GRIN3AQ8TCU5 1115 aa11.56□□□□□ -0.56
SUPT16H-202ENST00000552829 VOPP1Q96AW1 172 aa11.56□□□□□ -0.56
SUPT16H-202ENST00000552829 PPP1R16AQ96I34 528 aa11.56□□□□□ -0.56
SUPT16H-202ENST00000552829 RPRD1AQ96P16 312 aaPredicted RBP11.56□□□□□ -0.56
SUPT16H-202ENST00000552829 TMUB1Q9BVT8 246 aa11.56□□□□□ -0.56
SUPT16H-202ENST00000552829 USP25Q9UHP3 1055 aa11.56□□□□□ -0.56
SUPT16H-202ENST00000552829 SLC12A6Q9UHW9 1150 aa11.56□□□□□ -0.56
SUPT16H-202ENST00000552829 HOOK1Q9UJC3 728 aaKnown RBP11.56□□□□□ -0.56
SUPT16H-202ENST00000552829 APPL1Q9UKG1 709 aa11.56□□□□□ -0.56
SUPT16H-202ENST00000552829 TOR1BO14657 336 aa11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 TSPAN6O43657 245 aa11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 STX10O60499 249 aa11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 CALCAP01258 141 aa11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 SLC2A3P11169 496 aa11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 BRD2P25440 801 aaKnown RBP11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 IGFALSP35858 605 aa11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 GPD2P43304 727 aa11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 THOP1P52888 689 aa11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 KRT83P78385 493 aa11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 ARTNQ5T4W7 220 aa11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 TMEM270Q6UE05 265 aa11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 MACC1Q6ZN28 852 aa11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 PARS2Q7L3T8 475 aaKnown RBP11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 CCNJLQ8IV13 435 aa11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 GPR156Q8NFN8 814 aa11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 PCDH19Q8TAB3 1148 aa11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 C9orf43Q8TAL5 461 aaPredicted RBP11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 SPATA20Q8TB22 786 aa11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 SMARCE1Q969G3 411 aa11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 CCDC34Q96HJ3 373 aa11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 CMKLR1Q99788 373 aa11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 C2orf49Q9BVC5 232 aaPredicted RBP11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 TRIM62Q9BVG3 475 aa11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 SLC4A5Q9BY07 1137 aa11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 CDH19Q9H159 772 aa11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 TNKS2Q9H2K2 1166 aa11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 POPDC2Q9HBU9 364 aa11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 ANO10Q9NW15 660 aa11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 SIRPGQ9P1W8 387 aa11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 MAN1B1Q9UKM7 699 aa11.55□□□□□ -0.56
SUPT16H-202ENST00000552829 SHANK1Q9Y566 2161 aa11.54□□□□□ -0.56
SUPT16H-202ENST00000552829 M0QYT0 321 aa11.54□□□□□ -0.56
SUPT16H-202ENST00000552829 ZMPSTE24O75844 475 aa11.54□□□□□ -0.56
SUPT16H-202ENST00000552829 CNTN5O94779 1100 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms