RNA–Protein interactions for RNA: ENST00000550678.1

LINC02388-201, Transcript of long intergenic non-protein coding RNA 2388, humanhuman

TSL 2 BASIC

Gene LINC02388, Length 1,975 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02388-201ENST00000550678 USP7Q93009 1102 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 OLFM3Q96PB7 478 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 THUMPD3Q9BV44 507 aaKnown RBP6.54□□□□□ -1.36
LINC02388-201ENST00000550678 RNF38Q9H0F5 515 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 RIMS4Q9H426 269 aaPredicted RBP6.54□□□□□ -1.36
LINC02388-201ENST00000550678 CCDC134Q9H6E4 229 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 MLXIPQ9HAP2 919 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 RMND1Q9NWS8 449 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 SMPD3Q9NY59 655 aaPredicted RBP6.54□□□□□ -1.36
LINC02388-201ENST00000550678 LRWD1Q9UFC0 647 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 ITGA11Q9UKX5 1188 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 GINS2Q9Y248 185 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 PCDHGA7Q9Y5G6 932 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 PCDHGA6Q9Y5G7 932 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 SRPRBQ9Y5M8 271 aaKnown RBP6.54□□□□□ -1.36
LINC02388-201ENST00000550678 CAPN6Q9Y6Q1 641 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 MST1RQ04912 1400 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 N4BP2Q86UW6 1770 aaPredicted RBP6.54□□□□□ -1.36
LINC02388-201ENST00000550678 DLC1Q96QB1 1528 aa6.54□□□□□ -1.36
LINC02388-201ENST00000550678 PPLO60437 1756 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 GSTTP1A0A1W2PQM5 241 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 DENND3A2RUS2 1198 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 GRID2IPA4D2P6 1211 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 MAGEA13PA6NCF6 341 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 FAM205CA6NFA0 338 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 MIF4GDA9UHW6 222 aaKnown RBP6.53□□□□□ -1.36
LINC02388-201ENST00000550678 KCNJ18B7U540 433 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 DDX3XO00571 662 aaKnown RBP eCLIP6.53□□□□□ -1.36
LINC02388-201ENST00000550678 ZNF197O14709 1029 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 OGTO15294 1046 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 TBC1D4O60343 1298 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 SNX3O60493 162 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 DNAJB6O75190 326 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 MOCS3O95396 460 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 GSNP06396 782 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 ICAM2P13598 275 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 SLC11A1P49279 550 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 SLC26A2P50443 739 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 ITGA8P53708 1063 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 FCGRTP55899 365 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 PSMC6P62333 389 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 CREB5Q02930 508 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 TRA2AQ13595 282 aaKnown RBP eCLIP6.53□□□□□ -1.36
LINC02388-201ENST00000550678 DDX39BQ13838 428 aaKnown RBP6.53□□□□□ -1.36
LINC02388-201ENST00000550678 KCNJ12Q14500 433 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 RTN1Q16799 776 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 FAM187BQ17R55 369 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 CCDC142Q17RM4 750 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 PCGF3Q3KNV8 242 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 C4orf48Q5BLP8 95 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 ATXN7L2Q5T6C5 722 aaPredicted RBP6.53□□□□□ -1.36
LINC02388-201ENST00000550678 IZUMO3Q5VZ72 239 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 ZNF813Q6ZN06 617 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 ATG14Q6ZNE5 492 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 SLC24A5Q71RS6 500 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 COL23A1Q86Y22 540 aaPredicted RBP6.53□□□□□ -1.36
LINC02388-201ENST00000550678 TRIM59Q8IWR1 403 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 DIS3L2Q8IYB7 885 aaKnown RBP6.53□□□□□ -1.36
LINC02388-201ENST00000550678 CLEC4FQ8N1N0 589 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 MB21D1Q8N884 522 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 MRPL43Q8N983 215 aaKnown RBP6.53□□□□□ -1.36
LINC02388-201ENST00000550678 SMG7Q92540 1137 aaKnown RBP6.53□□□□□ -1.36
LINC02388-201ENST00000550678 RMND5BQ96G75 393 aaPredicted RBP6.53□□□□□ -1.36
LINC02388-201ENST00000550678 ZNF333Q96JL9 665 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 HAPLN3Q96S86 360 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 DMRTA2Q96SC8 542 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 PSMB7Q99436 277 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 KRT12Q99456 494 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 SPATA16Q9BXB7 569 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 MRPL4Q9BYD3 311 aaKnown RBP6.53□□□□□ -1.36
LINC02388-201ENST00000550678 TMEM245Q9H330 911 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 RUBCNLQ9H714 662 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 VPS54Q9P1Q0 977 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 PSMC3IPQ9P2W1 217 aaPredicted RBP6.53□□□□□ -1.36
LINC02388-201ENST00000550678 PACSIN2Q9UNF0 486 aaPredicted RBP6.53□□□□□ -1.36
LINC02388-201ENST00000550678 CORO2BQ9UQ03 480 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 CTNND2Q9UQB3 1225 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 STXBP5LQ9Y2K9 1186 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 USP15Q9Y4E8 981 aaPredicted RBP6.53□□□□□ -1.36
LINC02388-201ENST00000550678 PCDHGA5Q9Y5G8 931 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 ZNF609O15014 1411 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 POGZQ7Z3K3 1410 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 CEP170BQ9Y4F5 1589 aaPredicted RBP6.53□□□□□ -1.36
LINC02388-201ENST00000550678 A0A1W2PRV1 198 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 OR6C75A6NL08 312 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 AGAP14A8MT82 685 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 KPNA7A9QM74 516 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 EML1O00423 815 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 RASGRF2O14827 1237 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 VEGFDO43915 354 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 TADA2AO75478 443 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 PDE5AO76074 875 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 DIRAS3O95661 229 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 ASS1P00966 412 aaKnown RBP6.53□□□□□ -1.36
LINC02388-201ENST00000550678 HMGCRP04035 888 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 CCNB1P14635 433 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 KCNA3P22001 575 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 PEX2P28328 305 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 ECHS1P30084 290 aa6.53□□□□□ -1.36
LINC02388-201ENST00000550678 MAT2AP31153 395 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms