RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 K7ERQ8 282 aa30.8■■■□□ 2.52
CCM2-219ENST00000544363 ATP9BO43861 1147 aa30.8■■■□□ 2.52
CCM2-219ENST00000544363 SLCO1A2P46721 670 aa30.8■■■□□ 2.52
CCM2-219ENST00000544363 RNF135Q8IUD6 432 aa30.8■■■□□ 2.52
CCM2-219ENST00000544363 GSDMBQ8TAX9 411 aa30.8■■■□□ 2.52
CCM2-219ENST00000544363 FEM1CQ96JP0 617 aa30.8■■■□□ 2.52
CCM2-219ENST00000544363 SMAD6O43541 496 aaKnown RBP30.79■■■□□ 2.52
CCM2-219ENST00000544363 RNF40O75150 1001 aa30.79■■■□□ 2.52
CCM2-219ENST00000544363 EPOP01588 193 aa30.79■■■□□ 2.52
CCM2-219ENST00000544363 STX2P32856 288 aa30.79■■■□□ 2.52
CCM2-219ENST00000544363 CTSOP43234 321 aaPredicted RBP30.79■■■□□ 2.52
CCM2-219ENST00000544363 SULT2A1Q06520 285 aa30.79■■■□□ 2.52
CCM2-219ENST00000544363 MICALL1Q8N3F8 863 aa30.79■■■□□ 2.52
CCM2-219ENST00000544363 SMRP1Q8NCR6 262 aa30.79■■■□□ 2.52
CCM2-219ENST00000544363 NSMCE3Q96MG7 304 aa30.79■■■□□ 2.52
CCM2-219ENST00000544363 KIF26AQ9ULI4 1882 aaPredicted RBP30.79■■■□□ 2.52
CCM2-219ENST00000544363 MIA3Q5JRA6 1907 aa30.78■■■□□ 2.52
CCM2-219ENST00000544363 CHRNA4P43681 627 aa30.78■■■□□ 2.52
CCM2-219ENST00000544363 CDK18Q07002 472 aa30.78■■■□□ 2.52
CCM2-219ENST00000544363 SLC1A5Q15758 541 aa30.78■■■□□ 2.52
CCM2-219ENST00000544363 KLHL38Q2WGJ6 581 aa30.78■■■□□ 2.52
CCM2-219ENST00000544363 RALGPS1Q5JS13 557 aa30.78■■■□□ 2.52
CCM2-219ENST00000544363 ADIPOR2Q86V24 386 aa30.78■■■□□ 2.52
CCM2-219ENST00000544363 AHI1Q8N157 1196 aa30.78■■■□□ 2.52
CCM2-219ENST00000544363 SLC25A41Q8N5S1 370 aa30.78■■■□□ 2.52
CCM2-219ENST00000544363 ELSPBP1Q96BH3 223 aa30.78■■■□□ 2.52
CCM2-219ENST00000544363 IFT43Q96FT9 208 aa30.78■■■□□ 2.52
CCM2-219ENST00000544363 NECTIN4Q96NY8 510 aa30.78■■■□□ 2.52
CCM2-219ENST00000544363 CYTH2Q99418 400 aa30.78■■■□□ 2.52
CCM2-219ENST00000544363 PLA2G2FQ9BZM2 168 aa30.78■■■□□ 2.52
CCM2-219ENST00000544363 PPCSQ9HAB8 311 aa30.78■■■□□ 2.52
CCM2-219ENST00000544363 HS3ST2Q9Y278 367 aa30.78■■■□□ 2.52
CCM2-219ENST00000544363 DENND4AQ7Z401 1863 aa30.78■■■□□ 2.52
CCM2-219ENST00000544363 SOX1O00570 391 aaPredicted RBP30.77■■■□□ 2.52
CCM2-219ENST00000544363 POLBP06746 335 aa30.77■■■□□ 2.52
CCM2-219ENST00000544363 CISD3P0C7P0 127 aa30.77■■■□□ 2.52
CCM2-219ENST00000544363 AGBL2Q5U5Z8 902 aa30.77■■■□□ 2.52
CCM2-219ENST00000544363 PGM2Q96G03 612 aa30.77■■■□□ 2.52
CCM2-219ENST00000544363 ATP6V1G3Q96LB4 118 aa30.77■■■□□ 2.52
CCM2-219ENST00000544363 GAS2L1Q99501 681 aaPredicted RBP30.77■■■□□ 2.52
CCM2-219ENST00000544363 ECT2Q9H8V3 914 aa30.77■■■□□ 2.52
CCM2-219ENST00000544363 HPS4Q9NQG7 708 aa30.77■■■□□ 2.52
CCM2-219ENST00000544363 FETUBQ9UGM5 382 aa30.77■■■□□ 2.52
CCM2-219ENST00000544363 SLC25A13Q9UJS0 675 aa30.77■■■□□ 2.52
CCM2-219ENST00000544363 SOX13Q9UN79 622 aa30.77■■■□□ 2.52
CCM2-219ENST00000544363 TRIM24O15164 1050 aa30.76■■■□□ 2.52
CCM2-219ENST00000544363 DGKGP49619 791 aa30.76■■■□□ 2.52
CCM2-219ENST00000544363 PCID2Q5JVF3 399 aa30.76■■■□□ 2.52
CCM2-219ENST00000544363 NCEH1Q6PIU2 408 aa30.76■■■□□ 2.52
CCM2-219ENST00000544363 CYS1Q717R9 158 aa30.76■■■□□ 2.52
CCM2-219ENST00000544363 YAF2Q8IY57 180 aa30.76■■■□□ 2.52
CCM2-219ENST00000544363 RPL10LQ96L21 214 aaKnown RBP30.76■■■□□ 2.52
CCM2-219ENST00000544363 FAM161BQ96MY7 647 aa30.76■■■□□ 2.52
CCM2-219ENST00000544363 BCCIPQ9P287 314 aaKnown RBP eCLIP30.76■■■□□ 2.52
CCM2-219ENST00000544363 TRIOBPQ9H2D6 2365 aa30.76■■■□□ 2.51
CCM2-219ENST00000544363 FAM237BA0A1B0GVD1 139 aa30.76■■■□□ 2.51
CCM2-219ENST00000544363 POC1B-GALNT4F8VUJ3 575 aa30.76■■■□□ 2.51
CCM2-219ENST00000544363 ATXN1LP0C7T5 689 aaKnown RBP30.76■■■□□ 2.51
CCM2-219ENST00000544363 SRCP12931 536 aa30.76■■■□□ 2.51
CCM2-219ENST00000544363 GCAP28676 217 aa30.76■■■□□ 2.51
CCM2-219ENST00000544363 ECT2LQ008S8 904 aa30.76■■■□□ 2.51
CCM2-219ENST00000544363 CRYMQ14894 314 aa30.76■■■□□ 2.51
CCM2-219ENST00000544363 SIRPB2Q5JXA9 342 aa30.76■■■□□ 2.51
CCM2-219ENST00000544363 SPANXN3Q5MJ09 141 aa30.76■■■□□ 2.51
CCM2-219ENST00000544363 MBLAC2Q68D91 279 aa30.76■■■□□ 2.51
CCM2-219ENST00000544363 PARM1Q6UWI2 310 aa30.76■■■□□ 2.51
CCM2-219ENST00000544363 SRLQ86TD4 932 aa30.76■■■□□ 2.51
CCM2-219ENST00000544363 TMEM135Q86UB9 458 aa30.76■■■□□ 2.51
CCM2-219ENST00000544363 C12orf40Q86WS4 652 aa30.76■■■□□ 2.51
CCM2-219ENST00000544363 TDRPQ86YL5 185 aa30.76■■■□□ 2.51
CCM2-219ENST00000544363 ETFBKMTQ8IXQ9 262 aa30.76■■■□□ 2.51
CCM2-219ENST00000544363 TTC17Q96AE7 1141 aa30.76■■■□□ 2.51
CCM2-219ENST00000544363 KXD1Q9BQD3 176 aa30.76■■■□□ 2.51
CCM2-219ENST00000544363 KIFC1Q9BW19 673 aa30.76■■■□□ 2.51
CCM2-219ENST00000544363 SLC24A2Q9UI40 661 aa30.76■■■□□ 2.51
CCM2-219ENST00000544363 ARIH1Q9Y4X5 557 aaPredicted RBP30.76■■■□□ 2.51
CCM2-219ENST00000544363 RPS6KL1Q9Y6S9 549 aa30.76■■■□□ 2.51
CCM2-219ENST00000544363 OTOL1A6NHN0 477 aaPredicted RBP30.75■■■□□ 2.51
CCM2-219ENST00000544363 HMGB1P1B2RPK0 211 aaPredicted RBP30.75■■■□□ 2.51
CCM2-219ENST00000544363 RGS16O15492 202 aaPredicted RBP30.75■■■□□ 2.51
CCM2-219ENST00000544363 CDH16O75309 829 aa30.75■■■□□ 2.51
CCM2-219ENST00000544363 ALDH1A2O94788 518 aa30.75■■■□□ 2.51
CCM2-219ENST00000544363 C1QAP02745 245 aa30.75■■■□□ 2.51
CCM2-219ENST00000544363 PSMC3P17980 439 aa30.75■■■□□ 2.51
CCM2-219ENST00000544363 HLA-DPA1P20036 260 aa30.75■■■□□ 2.51
CCM2-219ENST00000544363 PRKCHP24723 683 aa30.75■■■□□ 2.51
CCM2-219ENST00000544363 STK19P49842 368 aaPredicted RBP30.75■■■□□ 2.51
CCM2-219ENST00000544363 GEN1Q17RS7 908 aa30.75■■■□□ 2.51
CCM2-219ENST00000544363 GAB4Q2WGN9 574 aa30.75■■■□□ 2.51
CCM2-219ENST00000544363 ATXN7L2Q5T6C5 722 aaPredicted RBP30.75■■■□□ 2.51
CCM2-219ENST00000544363 TMEM215Q68D42 235 aa30.75■■■□□ 2.51
CCM2-219ENST00000544363 KCTD16Q68DU8 428 aa30.75■■■□□ 2.51
CCM2-219ENST00000544363 TRIB3Q96RU7 358 aa30.75■■■□□ 2.51
CCM2-219ENST00000544363 MOCS1Q9NZB8 636 aa30.75■■■□□ 2.51
CCM2-219ENST00000544363 CD207Q9UJ71 328 aa30.75■■■□□ 2.51
CCM2-219ENST00000544363 SLC27A6Q9Y2P4 619 aa30.75■■■□□ 2.51
CCM2-219ENST00000544363 TULP3O75386 442 aa30.74■■■□□ 2.51
CCM2-219ENST00000544363 USP1O94782 785 aa30.74■■■□□ 2.51
CCM2-219ENST00000544363 POLR2EP19388 210 aaKnown RBP30.74■■■□□ 2.51
CCM2-219ENST00000544363 CSNK1DP48730 415 aa30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms