RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 CCNHP51946 323 aaPredicted RBP9.09□□□□□ -0.95
UBC-211ENST00000542416 MARSP56192 900 aaKnown RBP9.09□□□□□ -0.95
UBC-211ENST00000542416 DEUP1Q05D60 604 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 LINC00303Q3SY05 128 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 MANEAQ5SRI9 462 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 CRTC1Q6UUV9 634 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 MACC1Q6ZN28 852 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 PARS2Q7L3T8 475 aaKnown RBP9.09□□□□□ -0.95
UBC-211ENST00000542416 TFAP2DQ7Z6R9 452 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 GKN2Q86XP6 184 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 ELOA2Q8IYF1 753 aaPredicted RBP9.09□□□□□ -0.95
UBC-211ENST00000542416 FMR1NBQ8N0W7 255 aaPredicted RBP9.09□□□□□ -0.95
UBC-211ENST00000542416 ATL2Q8NHH9 583 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 CENPTQ96BT3 561 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 TIGD1Q96MW7 591 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 HAPLN3Q96S86 360 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 NPY6RQ99463 290 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 LRRC61Q9BV99 259 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 B3GNT4Q9C0J1 378 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 ZDHHC6Q9H6R6 413 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 EPB41L5Q9HCM4 733 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 ATP13A1Q9HD20 1204 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 PIGVQ9NUD9 493 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.09□□□□□ -0.952e-9■■□□□ 14
UBC-211ENST00000542416 HECAQ9UBI9 543 aaPredicted RBP9.09□□□□□ -0.95
UBC-211ENST00000542416 HPCAL4Q9UM19 191 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 MYLKQ15746 1914 aa9.09□□□□□ -0.95
UBC-211ENST00000542416 A0A1W2PQC6 194 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 D6RAR5 112 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 SRGAP2O75044 1071 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 ZMPSTE24O75844 475 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 TM7SF2O76062 418 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 GSRP00390 522 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 CTSEP14091 401 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 TSHRP16473 764 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 GGCXP38435 758 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 EIF4A3P38919 411 aaKnown RBP9.08□□□□□ -0.96
UBC-211ENST00000542416 SUOXP51687 545 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 HK3P52790 923 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 PDX1P52945 283 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 SNRPD1P62314 119 aaKnown RBP9.08□□□□□ -0.96
UBC-211ENST00000542416 GNA12Q03113 381 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 RAD51Q06609 339 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 SRSF1Q07955 248 aaKnown RBP eCLIP9.08□□□□□ -0.96
UBC-211ENST00000542416 C1orf61Q13536 156 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 SLC25A52Q3SY17 297 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 TMEM164Q5U3C3 297 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 TTI2Q6NXR4 508 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 FAM183BPQ6ZVS7 135 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 TTC7BQ86TV6 843 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 ZNF683Q8IZ20 524 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 RBFAQ8N0V3 343 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 RYBPQ8N488 228 aaPredicted RBP9.08□□□□□ -0.96
UBC-211ENST00000542416 WDTC1Q8N5D0 677 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 OR7D4Q8NG98 312 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 CXorf40AQ8TE69 158 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 NELFBQ8WX92 580 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 EXTL1Q92935 676 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 NT5C3BQ969T7 300 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 CMKLR1Q99788 373 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 ZYG11BQ9C0D3 744 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 MPP6Q9NZW5 540 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 AKAP7Q9P0M2 348 aaPredicted RBP9.08□□□□□ -0.96
UBC-211ENST00000542416 PPARGC1AQ9UBK2 798 aaKnown RBP9.08□□□□□ -0.96
UBC-211ENST00000542416 GULP1Q9UBP9 304 aa9.08□□□□□ -0.96
UBC-211ENST00000542416 PTPN13Q12923 2485 aa9.07□□□□□ -0.96
UBC-211ENST00000542416 ZSCAN5CA6NGD5 496 aaPredicted RBP9.07□□□□□ -0.96
UBC-211ENST00000542416 RNF103O00237 685 aa9.07□□□□□ -0.96
UBC-211ENST00000542416 AREL1O15033 823 aa9.07□□□□□ -0.96
UBC-211ENST00000542416 ZW10O43264 779 aa9.07□□□□□ -0.96
UBC-211ENST00000542416 NOBOXO60393 691 aa9.07□□□□□ -0.96
UBC-211ENST00000542416 RASGRP1O95267 797 aa9.07□□□□□ -0.96
UBC-211ENST00000542416 ERBB2P04626 1255 aa9.07□□□□□ -0.96
UBC-211ENST00000542416 RPLP0P05388 317 aaKnown RBP9.07□□□□□ -0.96
UBC-211ENST00000542416 PNLIPP16233 465 aa9.07□□□□□ -0.96
UBC-211ENST00000542416 ITGB6P18564 788 aa9.07□□□□□ -0.96
UBC-211ENST00000542416 SULT1E1P49888 294 aa9.07□□□□□ -0.96
UBC-211ENST00000542416 BPIFB4P59827 614 aa9.07□□□□□ -0.96
UBC-211ENST00000542416 RNASE9P60153 205 aaKnown RBP9.07□□□□□ -0.96
UBC-211ENST00000542416 MORC3Q14149 939 aa9.07□□□□□ -0.96
UBC-211ENST00000542416 MYLK3Q32MK0 819 aa9.07□□□□□ -0.96
UBC-211ENST00000542416 COLEC12Q5KU26 742 aa9.07□□□□□ -0.96
UBC-211ENST00000542416 KLHL10Q6JEL2 608 aa9.07□□□□□ -0.96
UBC-211ENST00000542416 TRIM65Q6PJ69 517 aa9.07□□□□□ -0.96
UBC-211ENST00000542416 VPS36Q86VN1 386 aa9.07□□□□□ -0.96
UBC-211ENST00000542416 MSANTD4Q8NCY6 345 aa9.07□□□□□ -0.96
UBC-211ENST00000542416 OR2AP1Q8NGE2 309 aa9.07□□□□□ -0.96
UBC-211ENST00000542416 SHC3Q92529 594 aa9.07□□□□□ -0.96
UBC-211ENST00000542416 CCDC74AQ96AQ1 378 aa9.07□□□□□ -0.96
UBC-211ENST00000542416 CPEB1Q9BZB8 566 aaKnown RBP9.07□□□□□ -0.96
UBC-211ENST00000542416 EDEM3Q9BZQ6 932 aa9.07□□□□□ -0.96
UBC-211ENST00000542416 TM6SF2Q9BZW4 377 aa9.07□□□□□ -0.96
UBC-211ENST00000542416 TRIM4Q9C037 500 aa9.07□□□□□ -0.96
UBC-211ENST00000542416 CLPBQ9H078 707 aa9.07□□□□□ -0.96
UBC-211ENST00000542416 SLC25A18Q9H1K4 315 aa9.07□□□□□ -0.96
UBC-211ENST00000542416 ADNPQ9H2P0 1102 aa9.07□□□□□ -0.96
UBC-211ENST00000542416 LRRN3Q9H3W5 708 aa9.07□□□□□ -0.96
UBC-211ENST00000542416 CAAP1Q9H8G2 361 aa9.07□□□□□ -0.96
UBC-211ENST00000542416 GEMIN8Q9NWZ8 242 aaKnown RBP9.07□□□□□ -0.96
UBC-211ENST00000542416 APEX2Q9UBZ4 518 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms