RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 PPP2R3CQ969Q6 453 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 SYT17Q9BSW7 474 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 DRC3Q9H069 523 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 TRPC7Q9HCX4 862 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 SORCS3Q9UPU3 1222 aa13.81□□□□□ -0.2
BNIP3-202ENST00000540159 CHRNA1P02708 482 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 PRSS56P0CW18 603 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 HOXD8P13378 290 aaPredicted RBP13.8□□□□□ -0.2
BNIP3-202ENST00000540159 GLDCP23378 1020 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 AXLP30530 894 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 LRPAP1P30533 357 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 CD86P42081 329 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 NTAN1Q96AB6 310 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 PARK7Q99497 189 aaKnown RBP13.8□□□□□ -0.2
BNIP3-202ENST00000540159 OSBPL2Q9H1P3 480 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 GPAMQ9HCL2 828 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 ARHGEF38Q9NXL2 777 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 ASB3Q9Y575 518 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 CDH23Q9H251 3354 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 A0A0U1RQS6 177 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 SCAMP3O14828 347 aaKnown RBP13.8□□□□□ -0.2
BNIP3-202ENST00000540159 CNTN5O94779 1100 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 FBXO21O94952 628 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 PMLP29590 882 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 GSTT1P30711 240 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 MAGEA12P43365 314 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 NPY2RP49146 381 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 C1QTNF8P60827 252 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 DSC2Q02487 901 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 PDK3Q15120 406 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 TLR1Q15399 786 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 FAM110CQ1W6H9 321 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 XKR4Q5GH76 650 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 DENND5AQ6IQ26 1287 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 TTC9BQ8N6N2 239 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 PPHLN1Q8NEY8 458 aaKnown RBP13.8□□□□□ -0.2
BNIP3-202ENST00000540159 FAM110BQ8TC76 370 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 ANKRD49Q8WVL7 239 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 ATP6V1E2Q96A05 226 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 LRGUKQ96M69 825 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 ALG9Q9H6U8 611 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 GLOD4Q9HC38 313 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 ADAM28Q9UKQ2 775 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 FBXO5Q9UKT4 447 aa13.8□□□□□ -0.2
BNIP3-202ENST00000540159 A0A1W2PQH9 124 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 RGSL1A5PLK6 1076 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 MAFKO60675 156 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 THRAP10827 490 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 PPARGP37231 505 aaPredicted RBP13.79□□□□□ -0.2
BNIP3-202ENST00000540159 NAB1Q13506 487 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 LILRA2Q8N149 483 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 DCUN1D1Q96GG9 259 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 RPL10LQ96L21 214 aaKnown RBP13.79□□□□□ -0.2
BNIP3-202ENST00000540159 KLHL32Q96NJ5 620 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 SMIM14Q96QK8 99 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 CYP2S1Q96SQ9 504 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 RTKNQ9BST9 563 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 FAM124BQ9H5Z6 455 aaPredicted RBP13.79□□□□□ -0.2
BNIP3-202ENST00000540159 OSER1Q9NX31 292 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 TRHDEQ9UKU6 1024 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 HAPLN1P10915 354 aaPredicted RBP13.79□□□□□ -0.2
BNIP3-202ENST00000540159 UQCRBP14927 111 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 ALOX15P16050 662 aaPredicted RBP13.79□□□□□ -0.2
BNIP3-202ENST00000540159 CPT1AP50416 773 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 WNT3AP56704 352 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 PURAQ00577 322 aaKnown RBP13.79□□□□□ -0.2
BNIP3-202ENST00000540159 SLC10A7Q0GE19 358 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 MAP2K5Q13163 448 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 TAF1CQ15572 869 aaPredicted RBP13.79□□□□□ -0.2
BNIP3-202ENST00000540159 SLC39A12Q504Y0 691 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 PCID2Q5JVF3 399 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 OVOS1Q6IE37 1185 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 LIMS2Q7Z4I7 341 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 ZNF467Q7Z7K2 595 aaPredicted RBP13.79□□□□□ -0.2
BNIP3-202ENST00000540159 KBTBD6Q86V97 674 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 IFT43Q96FT9 208 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 IPO11Q9UI26 975 aaKnown RBP13.79□□□□□ -0.2
BNIP3-202ENST00000540159 DSEQ9UL01 958 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 PDCD11Q14690 1871 aaKnown RBP13.79□□□□□ -0.2
BNIP3-202ENST00000540159 NCAM2O15394 837 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 SUPT7LO94864 414 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 SPATA31D3P0C874 917 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 CPB1P15086 417 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 ARSDP51689 593 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 MRPS6P82932 125 aaKnown RBP13.79□□□□□ -0.2
BNIP3-202ENST00000540159 PDAP1Q13442 181 aaKnown RBP13.79□□□□□ -0.2
BNIP3-202ENST00000540159 UPP1Q16831 310 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 AGKQ53H12 422 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 GPR158Q5T848 1215 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 NEPROQ6NW34 567 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 SPATA31D4Q6ZUB0 917 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 PQLC1Q8N2U9 271 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 SLC9A7Q96T83 725 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 PKP2Q99959 881 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 SIKE1Q9BRV8 207 aa13.79□□□□□ -0.2
BNIP3-202ENST00000540159 STN1Q9H668 368 aaKnown RBP13.79□□□□□ -0.2
BNIP3-202ENST00000540159 DMAP1Q9NPF5 467 aaPredicted RBP13.79□□□□□ -0.2
BNIP3-202ENST00000540159 C15orf38-AP3S2A0A0A6YYH1 394 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 TPST1O60507 370 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 B4GALT3O60512 393 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms